EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000000072 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 9638 bases
Position: chrGeneScaffold_2779:7876-17513
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000000067	LSM	PF01423.22	3.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000000071	SNRPN-201	720	-	ENSSARP00000000067	239 (aa)	-	UPI0001581338

Gene Model

Click here to download ENSSARG00000000072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000000072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000000072	SNRPN	100	77.824	ENSG00000128739	SNRPN	98	100.000	Homo_sapiens
ENSSARG00000000072	SNRPN	100	78.243	ENSAMEG00000007034	SNRPN	98	78.243	Ailuropoda_melanoleuca
ENSSARG00000000072	SNRPN	100	77.824	ENSANAG00000034241	SNRPN	99	77.824	Aotus_nancymaae
ENSSARG00000000072	SNRPN	100	78.243	ENSBTAG00000008251	SNRPN	99	78.243	Bos_taurus
ENSSARG00000000072	SNRPN	95	76.652	ENSCJAG00000042622	-	95	76.652	Callithrix_jacchus
ENSSARG00000000072	SNRPN	100	77.824	ENSCJAG00000003759	-	99	77.824	Callithrix_jacchus
ENSSARG00000000072	SNRPN	100	78.243	ENSCAFG00000010127	SNRPN	99	78.243	Canis_familiaris
ENSSARG00000000072	SNRPN	100	78.243	ENSCAFG00020024075	SNRPN	99	78.243	Canis_lupus_dingo
ENSSARG00000000072	SNRPN	100	78.243	ENSCHIG00000017477	SNRPN	99	78.243	Capra_hircus
ENSSARG00000000072	SNRPN	100	77.824	ENSTSYG00000005248	SNRPN	99	77.824	Carlito_syrichta
ENSSARG00000000072	SNRPN	100	77.824	ENSCAPG00000003047	SNRPN	99	77.824	Cavia_aperea
ENSSARG00000000072	SNRPN	100	77.824	ENSCPOG00000020270	SNRPN	99	77.824	Cavia_porcellus
ENSSARG00000000072	SNRPN	100	77.824	ENSCCAG00000024231	SNRPN	99	77.824	Cebus_capucinus
ENSSARG00000000072	SNRPN	100	77.824	ENSCATG00000032518	SNRPN	99	77.824	Cercocebus_atys
ENSSARG00000000072	SNRPN	100	77.824	ENSCLAG00000011376	SNRPN	99	77.824	Chinchilla_lanigera
ENSSARG00000000072	SNRPN	100	77.824	ENSCSAG00000006406	SNRPN	99	77.824	Chlorocebus_sabaeus
ENSSARG00000000072	SNRPN	98	76.923	ENSCHOG00000001846	SNRPN	88	76.923	Choloepus_hoffmanni
ENSSARG00000000072	SNRPN	100	77.824	ENSCANG00000041156	SNRPN	99	77.824	Colobus_angolensis_palliatus
ENSSARG00000000072	SNRPN	100	77.406	ENSCGRG00001004136	Snrpn	99	77.406	Cricetulus_griseus_chok1gshd
ENSSARG00000000072	SNRPN	100	77.406	ENSCGRG00000001621	Snrpn	99	77.406	Cricetulus_griseus_crigri
ENSSARG00000000072	SNRPN	99	69.038	ENSCVAG00000014193	SNRPN	98	69.038	Cyprinodon_variegatus
ENSSARG00000000072	SNRPN	100	77.406	ENSDNOG00000037060	SNRPN	98	77.406	Dasypus_novemcinctus
ENSSARG00000000072	SNRPN	100	78.243	ENSDORG00000004527	Snrpn	99	78.243	Dipodomys_ordii
ENSSARG00000000072	SNRPN	100	78.243	ENSEASG00005017871	SNRPN	99	78.243	Equus_asinus_asinus
ENSSARG00000000072	SNRPN	100	78.243	ENSECAG00000018148	SNRPN	99	78.243	Equus_caballus
ENSSARG00000000072	SNRPN	100	77.824	ENSEEUG00000007440	-	100	77.824	Erinaceus_europaeus
ENSSARG00000000072	SNRPN	100	78.243	ENSFCAG00000022298	-	99	78.243	Felis_catus
ENSSARG00000000072	SNRPN	80	64.062	ENSFDAG00000010528	-	91	62.051	Fukomys_damarensis
ENSSARG00000000072	SNRPN	100	78.243	ENSFDAG00000016578	-	99	78.243	Fukomys_damarensis
ENSSARG00000000072	SNRPN	95	83.260	ENSGMOG00000018161	SNRPN	99	83.260	Gadus_morhua
ENSSARG00000000072	SNRPN	100	77.824	ENSGGOG00000003988	SNRPN	99	77.824	Gorilla_gorilla
ENSSARG00000000072	SNRPN	100	77.824	ENSHGLG00000011924	SNRPN	99	77.824	Heterocephalus_glaber_female
ENSSARG00000000072	SNRPN	100	70.711	ENSHGLG00000019812	-	92	69.091	Heterocephalus_glaber_female
ENSSARG00000000072	SNRPN	70	91.176	ENSHGLG00000002327	-	66	91.176	Heterocephalus_glaber_female
ENSSARG00000000072	SNRPN	100	70.711	ENSHGLG00100021056	-	92	69.091	Heterocephalus_glaber_male
ENSSARG00000000072	SNRPN	100	77.824	ENSHGLG00100016559	SNRPN	99	77.824	Heterocephalus_glaber_male
ENSSARG00000000072	SNRPN	100	77.824	ENSSTOG00000001339	SNRPN	99	77.824	Ictidomys_tridecemlineatus
ENSSARG00000000072	SNRPN	100	78.243	ENSLAFG00000009458	SNRPN	99	78.243	Loxodonta_africana
ENSSARG00000000072	SNRPN	100	77.824	ENSMFAG00000042235	SNRPN	99	77.824	Macaca_fascicularis
ENSSARG00000000072	SNRPN	100	77.824	ENSMMUG00000023139	SNURF	99	77.824	Macaca_mulatta
ENSSARG00000000072	SNRPN	100	77.824	ENSMNEG00000031291	SNRPN	99	77.824	Macaca_nemestrina
ENSSARG00000000072	SNRPN	100	77.824	ENSMLEG00000038837	SNRPN	99	77.824	Mandrillus_leucophaeus
ENSSARG00000000072	SNRPN	100	77.824	ENSMAUG00000000051	Snrpn	99	77.824	Mesocricetus_auratus
ENSSARG00000000072	SNRPN	100	77.824	ENSMICG00000042356	SNRPN	99	77.824	Microcebus_murinus
ENSSARG00000000072	SNRPN	100	77.824	ENSMOCG00000015350	Snrpn	99	77.824	Microtus_ochrogaster
ENSSARG00000000072	SNRPN	100	77.824	MGP_CAROLIEiJ_G0029815	Snrpn	99	77.824	Mus_caroli
ENSSARG00000000072	SNRPN	100	77.824	ENSMUSG00000102252	Snrpn	99	77.824	Mus_musculus
ENSSARG00000000072	SNRPN	100	77.824	MGP_PahariEiJ_G0013040	Snrpn	99	77.824	Mus_pahari
ENSSARG00000000072	SNRPN	100	77.824	MGP_SPRETEiJ_G0030918	Snrpn	99	77.824	Mus_spretus
ENSSARG00000000072	SNRPN	100	78.243	ENSMPUG00000014638	-	99	78.243	Mustela_putorius_furo
ENSSARG00000000072	SNRPN	100	78.661	ENSMLUG00000023361	-	98	78.661	Myotis_lucifugus
ENSSARG00000000072	SNRPN	100	77.824	ENSNGAG00000000181	Snrpn	99	77.824	Nannospalax_galili
ENSSARG00000000072	SNRPN	79	100.000	ENSNLEG00000001376	SNRPN	79	100.000	Nomascus_leucogenys
ENSSARG00000000072	SNRPN	98	60.684	ENSODEG00000016065	-	87	59.903	Octodon_degus
ENSSARG00000000072	SNRPN	100	78.243	ENSODEG00000020110	-	99	78.243	Octodon_degus
ENSSARG00000000072	SNRPN	78	100.000	ENSODEG00000019708	-	92	76.256	Octodon_degus
ENSSARG00000000072	SNRPN	100	78.243	ENSODEG00000013478	-	99	78.243	Octodon_degus
ENSSARG00000000072	SNRPN	100	77.500	ENSOCUG00000003532	-	99	77.500	Oryctolagus_cuniculus
ENSSARG00000000072	SNRPN	99	69.874	ENSORLG00020007490	SNRPN	98	69.874	Oryzias_latipes_hni
ENSSARG00000000072	SNRPN	99	69.874	ENSORLG00015003332	SNRPN	98	69.874	Oryzias_latipes_hsok
ENSSARG00000000072	SNRPN	99	70.293	ENSOMEG00000002066	SNRPN	98	70.293	Oryzias_melastigma
ENSSARG00000000072	SNRPN	100	77.824	ENSOGAG00000007392	SNRPN	99	77.824	Otolemur_garnettii
ENSSARG00000000072	SNRPN	100	78.243	ENSOARG00000009080	SNRPN	99	78.243	Ovis_aries
ENSSARG00000000072	SNRPN	100	77.824	ENSPPAG00000027650	SNRPN	99	77.824	Pan_paniscus
ENSSARG00000000072	SNRPN	100	78.243	ENSPPRG00000019878	-	99	78.243	Panthera_pardus
ENSSARG00000000072	SNRPN	100	77.824	ENSPTIG00000004537	SNRPN	99	77.824	Panthera_tigris_altaica
ENSSARG00000000072	SNRPN	100	77.824	ENSPTRG00000006826	SNRPN	99	77.824	Pan_troglodytes
ENSSARG00000000072	SNRPN	100	77.824	ENSPANG00000020142	SNRPN	99	77.824	Papio_anubis
ENSSARG00000000072	SNRPN	100	77.824	ENSPEMG00000012911	-	99	77.824	Peromyscus_maniculatus_bairdii
ENSSARG00000000072	SNRPN	99	70.293	ENSPMEG00000020674	SNRPN	98	70.293	Poecilia_mexicana
ENSSARG00000000072	SNRPN	100	77.824	ENSPPYG00000006269	SNURF	99	77.824	Pongo_abelii
ENSSARG00000000072	SNRPN	100	77.824	ENSPCOG00000014231	SNRPN	99	77.824	Propithecus_coquereli
ENSSARG00000000072	SNRPN	100	77.824	ENSRNOG00000059764	Snrpn	99	77.824	Rattus_norvegicus
ENSSARG00000000072	SNRPN	100	77.824	ENSRBIG00000041765	SNRPN	99	77.824	Rhinopithecus_bieti
ENSSARG00000000072	SNRPN	100	77.824	ENSRROG00000035157	SNRPN	99	77.824	Rhinopithecus_roxellana
ENSSARG00000000072	SNRPN	100	77.824	ENSSBOG00000000110	-	99	77.824	Saimiri_boliviensis_boliviensis
ENSSARG00000000072	SNRPN	100	76.987	ENSSBOG00000024929	-	99	76.987	Saimiri_boliviensis_boliviensis
ENSSARG00000000072	SNRPN	100	78.661	ENSSSCG00000028124	SNRPN	100	78.017	Sus_scrofa
ENSSARG00000000072	SNRPN	100	78.243	ENSTTRG00000010966	SNRPN	88	78.243	Tursiops_truncatus
ENSSARG00000000072	SNRPN	93	76.682	ENSUAMG00000016284	SNRPN	78	76.682	Ursus_americanus
ENSSARG00000000072	SNRPN	100	78.243	ENSUMAG00000025589	SNRPN	99	78.243	Ursus_maritimus
ENSSARG00000000072	SNRPN	95	77.193	ENSVVUG00000017971	SNRPN	93	77.193	Vulpes_vulpes