EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000000162 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 7584 bases
Position: chrGeneScaffold_338:52098-59681
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000000146	EXOSC1	PF10447.9	1.8e-13	1	1
ENSSARP00000000146	ECR1_N	PF14382.6	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000000160	EXOSC1-201	588	-	ENSSARP00000000146	195 (aa)	-	UPI0001581692

Gene Model

Click here to download ENSSARG00000000162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000000162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000000162	EXOSC1	100	83.590	ENSG00000171311	EXOSC1	100	83.590	Homo_sapiens
ENSSARG00000000162	EXOSC1	98	68.586	ENSAPOG00000007822	exosc1	98	68.586	Acanthochromis_polyacanthus
ENSSARG00000000162	EXOSC1	100	84.615	ENSAMEG00000000129	EXOSC1	100	84.615	Ailuropoda_melanoleuca
ENSSARG00000000162	EXOSC1	96	68.085	ENSACIG00000018956	exosc1	92	68.085	Amphilophus_citrinellus
ENSSARG00000000162	EXOSC1	98	68.586	ENSAOCG00000010699	exosc1	98	68.586	Amphiprion_ocellaris
ENSSARG00000000162	EXOSC1	92	58.659	ENSAPEG00000012690	exosc1	96	58.659	Amphiprion_percula
ENSSARG00000000162	EXOSC1	98	68.063	ENSATEG00000018683	exosc1	98	68.063	Anabas_testudineus
ENSSARG00000000162	EXOSC1	99	74.093	ENSACAG00000002101	EXOSC1	99	74.093	Anolis_carolinensis
ENSSARG00000000162	EXOSC1	100	84.615	ENSANAG00000034669	EXOSC1	100	84.615	Aotus_nancymaae
ENSSARG00000000162	EXOSC1	98	68.586	ENSACLG00000021243	exosc1	98	68.586	Astatotilapia_calliptera
ENSSARG00000000162	EXOSC1	98	70.157	ENSAMXG00000011116	exosc1	98	70.157	Astyanax_mexicanus
ENSSARG00000000162	EXOSC1	100	84.103	ENSBTAG00000012699	EXOSC1	100	84.103	Bos_taurus
ENSSARG00000000162	EXOSC1	100	84.103	ENSCJAG00000016586	EXOSC1	100	84.103	Callithrix_jacchus
ENSSARG00000000162	EXOSC1	100	84.615	ENSCAFG00000009068	EXOSC1	94	84.615	Canis_familiaris
ENSSARG00000000162	EXOSC1	100	84.615	ENSCAFG00020006002	EXOSC1	94	84.615	Canis_lupus_dingo
ENSSARG00000000162	EXOSC1	100	84.103	ENSCHIG00000015253	EXOSC1	100	84.103	Capra_hircus
ENSSARG00000000162	EXOSC1	100	84.103	ENSTSYG00000000760	EXOSC1	100	84.103	Carlito_syrichta
ENSSARG00000000162	EXOSC1	100	83.590	ENSCPOG00000001173	EXOSC1	100	83.590	Cavia_porcellus
ENSSARG00000000162	EXOSC1	100	53.333	ENSCCAG00000023986	EXOSC1	100	53.333	Cebus_capucinus
ENSSARG00000000162	EXOSC1	100	83.590	ENSCATG00000034114	EXOSC1	100	83.590	Cercocebus_atys
ENSSARG00000000162	EXOSC1	100	84.103	ENSCLAG00000002463	EXOSC1	100	84.103	Chinchilla_lanigera
ENSSARG00000000162	EXOSC1	100	83.077	ENSCSAG00000005870	EXOSC1	100	83.077	Chlorocebus_sabaeus
ENSSARG00000000162	EXOSC1	96	95.722	ENSCHOG00000006477	EXOSC1	100	95.722	Choloepus_hoffmanni
ENSSARG00000000162	EXOSC1	54	59.434	ENSCPBG00000011949	EXOSC1	88	59.434	Chrysemys_picta_bellii
ENSSARG00000000162	EXOSC1	95	50.267	ENSCING00000022734	-	89	50.267	Ciona_intestinalis
ENSSARG00000000162	EXOSC1	95	51.337	ENSCSAVG00000010865	-	95	51.337	Ciona_savignyi
ENSSARG00000000162	EXOSC1	100	83.590	ENSCANG00000034159	EXOSC1	100	83.590	Colobus_angolensis_palliatus
ENSSARG00000000162	EXOSC1	100	83.077	ENSCGRG00001000335	Exosc1	100	83.077	Cricetulus_griseus_chok1gshd
ENSSARG00000000162	EXOSC1	100	83.077	ENSCGRG00000011602	Exosc1	100	83.077	Cricetulus_griseus_crigri
ENSSARG00000000162	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSSARG00000000162	EXOSC1	98	64.398	ENSCVAG00000016748	exosc1	98	64.398	Cyprinodon_variegatus
ENSSARG00000000162	EXOSC1	98	69.110	ENSDARG00000059841	exosc1	98	69.110	Danio_rerio
ENSSARG00000000162	EXOSC1	75	79.730	ENSDNOG00000007983	EXOSC1	100	79.730	Dasypus_novemcinctus
ENSSARG00000000162	EXOSC1	100	83.077	ENSDORG00000016528	Exosc1	100	83.077	Dipodomys_ordii
ENSSARG00000000162	EXOSC1	94	44.444	FBgn0032346	Csl4	92	44.444	Drosophila_melanogaster
ENSSARG00000000162	EXOSC1	100	83.077	ENSETEG00000002469	-	100	83.077	Echinops_telfairi
ENSSARG00000000162	EXOSC1	99	57.653	ENSEBUG00000008164	exosc1	98	57.653	Eptatretus_burgeri
ENSSARG00000000162	EXOSC1	100	84.103	ENSEASG00005008684	EXOSC1	100	84.103	Equus_asinus_asinus
ENSSARG00000000162	EXOSC1	61	72.269	ENSECAG00000010621	EXOSC1	71	72.269	Equus_caballus
ENSSARG00000000162	EXOSC1	100	84.103	ENSEEUG00000005647	EXOSC1	100	84.103	Erinaceus_europaeus
ENSSARG00000000162	EXOSC1	94	68.478	ENSELUG00000017369	exosc1	97	62.500	Esox_lucius
ENSSARG00000000162	EXOSC1	100	84.615	ENSFCAG00000040563	EXOSC1	100	84.615	Felis_catus
ENSSARG00000000162	EXOSC1	100	73.333	ENSFALG00000008450	EXOSC1	100	73.333	Ficedula_albicollis
ENSSARG00000000162	EXOSC1	100	84.103	ENSFDAG00000000846	EXOSC1	100	84.103	Fukomys_damarensis
ENSSARG00000000162	EXOSC1	98	64.398	ENSFHEG00000009154	exosc1	98	64.398	Fundulus_heteroclitus
ENSSARG00000000162	EXOSC1	98	68.586	ENSGMOG00000008993	exosc1	98	68.586	Gadus_morhua
ENSSARG00000000162	EXOSC1	100	71.795	ENSGALG00000039917	EXOSC1	86	88.430	Gallus_gallus
ENSSARG00000000162	EXOSC1	98	64.921	ENSGAFG00000010265	exosc1	94	64.921	Gambusia_affinis
ENSSARG00000000162	EXOSC1	98	69.110	ENSGACG00000018936	exosc1	98	69.110	Gasterosteus_aculeatus
ENSSARG00000000162	EXOSC1	100	73.333	ENSGAGG00000019192	EXOSC1	100	73.333	Gopherus_agassizii
ENSSARG00000000162	EXOSC1	100	83.077	ENSGGOG00000003099	EXOSC1	100	83.077	Gorilla_gorilla
ENSSARG00000000162	EXOSC1	98	68.586	ENSHBUG00000017857	exosc1	98	68.586	Haplochromis_burtoni
ENSSARG00000000162	EXOSC1	100	83.590	ENSHGLG00000016927	EXOSC1	100	83.590	Heterocephalus_glaber_female
ENSSARG00000000162	EXOSC1	100	83.590	ENSHGLG00100012208	EXOSC1	100	83.590	Heterocephalus_glaber_male
ENSSARG00000000162	EXOSC1	98	68.063	ENSHCOG00000019882	exosc1	98	68.063	Hippocampus_comes
ENSSARG00000000162	EXOSC1	98	70.157	ENSIPUG00000007685	exosc1	98	70.157	Ictalurus_punctatus
ENSSARG00000000162	EXOSC1	63	61.475	ENSSTOG00000029860	-	93	61.475	Ictidomys_tridecemlineatus
ENSSARG00000000162	EXOSC1	100	84.615	ENSSTOG00000006615	EXOSC1	100	84.615	Ictidomys_tridecemlineatus
ENSSARG00000000162	EXOSC1	100	84.103	ENSJJAG00000013311	Exosc1	100	84.103	Jaculus_jaculus
ENSSARG00000000162	EXOSC1	98	67.539	ENSKMAG00000001202	exosc1	81	67.539	Kryptolebias_marmoratus
ENSSARG00000000162	EXOSC1	98	68.063	ENSLBEG00000011448	exosc1	98	68.063	Labrus_bergylta
ENSSARG00000000162	EXOSC1	98	54.315	ENSLOCG00000003776	exosc1	98	54.315	Lepisosteus_oculatus
ENSSARG00000000162	EXOSC1	100	84.103	ENSLAFG00000015983	EXOSC1	100	84.103	Loxodonta_africana
ENSSARG00000000162	EXOSC1	100	83.590	ENSMFAG00000001493	EXOSC1	100	83.590	Macaca_fascicularis
ENSSARG00000000162	EXOSC1	100	83.590	ENSMMUG00000020028	EXOSC1	100	83.590	Macaca_mulatta
ENSSARG00000000162	EXOSC1	100	83.590	ENSMNEG00000029816	EXOSC1	100	83.590	Macaca_nemestrina
ENSSARG00000000162	EXOSC1	100	77.949	ENSMLEG00000027643	EXOSC1	100	77.949	Mandrillus_leucophaeus
ENSSARG00000000162	EXOSC1	98	69.110	ENSMAMG00000012200	exosc1	98	69.110	Mastacembelus_armatus
ENSSARG00000000162	EXOSC1	98	68.586	ENSMZEG00005007042	exosc1	98	68.586	Maylandia_zebra
ENSSARG00000000162	EXOSC1	100	83.077	ENSMAUG00000020462	-	100	83.077	Mesocricetus_auratus
ENSSARG00000000162	EXOSC1	100	83.590	ENSMICG00000007664	EXOSC1	100	83.590	Microcebus_murinus
ENSSARG00000000162	EXOSC1	100	83.077	ENSMOCG00000006004	-	100	83.077	Microtus_ochrogaster
ENSSARG00000000162	EXOSC1	97	76.316	ENSMOCG00000017124	-	97	76.316	Microtus_ochrogaster
ENSSARG00000000162	EXOSC1	99	52.577	ENSMMOG00000021403	exosc1	99	52.577	Mola_mola
ENSSARG00000000162	EXOSC1	100	79.592	ENSMODG00000004213	EXOSC1	100	79.592	Monodelphis_domestica
ENSSARG00000000162	EXOSC1	94	69.022	ENSMALG00000007061	exosc1	92	69.022	Monopterus_albus
ENSSARG00000000162	EXOSC1	100	83.077	MGP_CAROLIEiJ_G0022959	Exosc1	100	83.077	Mus_caroli
ENSSARG00000000162	EXOSC1	100	83.077	ENSMUSG00000034321	Exosc1	100	83.077	Mus_musculus
ENSSARG00000000162	EXOSC1	100	83.077	MGP_PahariEiJ_G0014449	Exosc1	100	83.077	Mus_pahari
ENSSARG00000000162	EXOSC1	100	83.077	MGP_SPRETEiJ_G0023880	Exosc1	100	83.077	Mus_spretus
ENSSARG00000000162	EXOSC1	100	84.615	ENSMPUG00000017044	EXOSC1	100	84.615	Mustela_putorius_furo
ENSSARG00000000162	EXOSC1	100	83.590	ENSMLUG00000009228	EXOSC1	100	83.590	Myotis_lucifugus
ENSSARG00000000162	EXOSC1	100	82.564	ENSNGAG00000022033	Exosc1	100	82.564	Nannospalax_galili
ENSSARG00000000162	EXOSC1	98	53.927	ENSNBRG00000024007	exosc1	97	53.927	Neolamprologus_brichardi
ENSSARG00000000162	EXOSC1	100	83.077	ENSNLEG00000013872	EXOSC1	100	83.077	Nomascus_leucogenys
ENSSARG00000000162	EXOSC1	59	68.696	ENSMEUG00000002246	EXOSC1	100	68.696	Notamacropus_eugenii
ENSSARG00000000162	EXOSC1	100	83.077	ENSOPRG00000005065	EXOSC1	100	83.077	Ochotona_princeps
ENSSARG00000000162	EXOSC1	100	83.590	ENSODEG00000016709	EXOSC1	100	83.590	Octodon_degus
ENSSARG00000000162	EXOSC1	98	68.586	ENSONIG00000017683	exosc1	98	68.586	Oreochromis_niloticus
ENSSARG00000000162	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	96	93.388	Ornithorhynchus_anatinus
ENSSARG00000000162	EXOSC1	100	78.462	ENSOCUG00000026461	-	100	78.462	Oryctolagus_cuniculus
ENSSARG00000000162	EXOSC1	100	83.673	ENSOCUG00000011898	-	100	83.673	Oryctolagus_cuniculus
ENSSARG00000000162	EXOSC1	98	66.667	ENSORLG00000011595	exosc1	98	66.667	Oryzias_latipes
ENSSARG00000000162	EXOSC1	98	66.667	ENSORLG00020005831	exosc1	98	66.667	Oryzias_latipes_hni
ENSSARG00000000162	EXOSC1	98	66.667	ENSORLG00015004317	exosc1	98	66.667	Oryzias_latipes_hsok
ENSSARG00000000162	EXOSC1	98	53.403	ENSOMEG00000013907	exosc1	98	53.403	Oryzias_melastigma
ENSSARG00000000162	EXOSC1	100	83.077	ENSOGAG00000016259	EXOSC1	100	83.077	Otolemur_garnettii
ENSSARG00000000162	EXOSC1	100	83.590	ENSOARG00000010136	EXOSC1	100	83.590	Ovis_aries
ENSSARG00000000162	EXOSC1	100	77.665	ENSPPAG00000039842	EXOSC1	100	77.665	Pan_paniscus
ENSSARG00000000162	EXOSC1	100	84.615	ENSPPRG00000023366	EXOSC1	100	84.615	Panthera_pardus
ENSSARG00000000162	EXOSC1	100	84.615	ENSPTIG00000017701	EXOSC1	100	84.615	Panthera_tigris_altaica
ENSSARG00000000162	EXOSC1	100	83.590	ENSPTRG00000002808	EXOSC1	100	83.590	Pan_troglodytes
ENSSARG00000000162	EXOSC1	100	83.590	ENSPANG00000021324	EXOSC1	100	83.590	Papio_anubis
ENSSARG00000000162	EXOSC1	98	70.157	ENSPKIG00000016037	exosc1	98	70.157	Paramormyrops_kingsleyae
ENSSARG00000000162	EXOSC1	62	80.992	ENSPSIG00000013571	EXOSC1	98	80.992	Pelodiscus_sinensis
ENSSARG00000000162	EXOSC1	98	67.539	ENSPMGG00000014002	exosc1	98	67.539	Periophthalmus_magnuspinnatus
ENSSARG00000000162	EXOSC1	100	83.077	ENSPEMG00000010710	-	100	83.077	Peromyscus_maniculatus_bairdii
ENSSARG00000000162	EXOSC1	95	63.102	ENSPMAG00000000195	exosc1	95	63.102	Petromyzon_marinus
ENSSARG00000000162	EXOSC1	100	80.513	ENSPCIG00000002210	EXOSC1	99	80.513	Phascolarctos_cinereus
ENSSARG00000000162	EXOSC1	98	64.398	ENSPFOG00000006755	exosc1	94	64.398	Poecilia_formosa
ENSSARG00000000162	EXOSC1	98	64.398	ENSPLAG00000005880	exosc1	98	64.398	Poecilia_latipinna
ENSSARG00000000162	EXOSC1	98	64.398	ENSPMEG00000015598	exosc1	94	64.398	Poecilia_mexicana
ENSSARG00000000162	EXOSC1	98	64.398	ENSPREG00000000405	exosc1	93	64.398	Poecilia_reticulata
ENSSARG00000000162	EXOSC1	100	83.077	ENSPPYG00000002531	EXOSC1	100	83.077	Pongo_abelii
ENSSARG00000000162	EXOSC1	100	83.590	ENSPCAG00000009135	EXOSC1	100	83.590	Procavia_capensis
ENSSARG00000000162	EXOSC1	100	77.436	ENSPCOG00000027539	EXOSC1	100	77.436	Propithecus_coquereli
ENSSARG00000000162	EXOSC1	100	84.103	ENSPVAG00000003372	EXOSC1	100	84.103	Pteropus_vampyrus
ENSSARG00000000162	EXOSC1	98	68.586	ENSPNYG00000021745	exosc1	98	68.586	Pundamilia_nyererei
ENSSARG00000000162	EXOSC1	99	69.430	ENSPNAG00000001944	exosc1	99	69.430	Pygocentrus_nattereri
ENSSARG00000000162	EXOSC1	100	83.077	ENSRNOG00000048708	Exosc1	100	83.077	Rattus_norvegicus
ENSSARG00000000162	EXOSC1	100	83.590	ENSRBIG00000035618	EXOSC1	100	83.590	Rhinopithecus_bieti
ENSSARG00000000162	EXOSC1	100	83.590	ENSRROG00000032589	EXOSC1	100	83.590	Rhinopithecus_roxellana
ENSSARG00000000162	EXOSC1	100	84.615	ENSSBOG00000000359	EXOSC1	100	84.615	Saimiri_boliviensis_boliviensis
ENSSARG00000000162	EXOSC1	62	96.721	ENSSHAG00000018219	EXOSC1	83	96.721	Sarcophilus_harrisii
ENSSARG00000000162	EXOSC1	98	71.204	ENSSFOG00015009069	exosc1	98	71.204	Scleropages_formosus
ENSSARG00000000162	EXOSC1	98	67.708	ENSSFOG00015016289	-	98	67.708	Scleropages_formosus
ENSSARG00000000162	EXOSC1	98	69.110	ENSSMAG00000003721	exosc1	98	69.110	Scophthalmus_maximus
ENSSARG00000000162	EXOSC1	98	69.110	ENSSDUG00000002993	exosc1	98	69.110	Seriola_dumerili
ENSSARG00000000162	EXOSC1	98	69.110	ENSSLDG00000025181	exosc1	98	69.110	Seriola_lalandi_dorsalis
ENSSARG00000000162	EXOSC1	99	72.680	ENSSPUG00000012263	EXOSC1	99	72.680	Sphenodon_punctatus
ENSSARG00000000162	EXOSC1	98	60.209	ENSSPAG00000016792	exosc1	82	60.209	Stegastes_partitus
ENSSARG00000000162	EXOSC1	100	84.103	ENSSSCG00000010518	EXOSC1	91	84.103	Sus_scrofa
ENSSARG00000000162	EXOSC1	98	71.875	ENSTGUG00000009692	EXOSC1	99	71.875	Taeniopygia_guttata
ENSSARG00000000162	EXOSC1	97	62.963	ENSTRUG00000007706	exosc1	98	62.963	Takifugu_rubripes
ENSSARG00000000162	EXOSC1	97	62.500	ENSTNIG00000014079	exosc1	97	62.500	Tetraodon_nigroviridis
ENSSARG00000000162	EXOSC1	100	86.667	ENSTBEG00000006011	EXOSC1	100	86.667	Tupaia_belangeri
ENSSARG00000000162	EXOSC1	94	83.696	ENSTTRG00000009887	EXOSC1	100	83.696	Tursiops_truncatus
ENSSARG00000000162	EXOSC1	100	68.205	ENSUAMG00000010266	EXOSC1	100	68.205	Ursus_americanus
ENSSARG00000000162	EXOSC1	100	67.179	ENSUMAG00000022002	EXOSC1	100	67.179	Ursus_maritimus
ENSSARG00000000162	EXOSC1	100	84.615	ENSVVUG00000023192	EXOSC1	63	84.615	Vulpes_vulpes
ENSSARG00000000162	EXOSC1	98	68.750	ENSXETG00000003434	exosc1	99	68.750	Xenopus_tropicalis
ENSSARG00000000162	EXOSC1	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSSARG00000000162	EXOSC1	98	64.921	ENSXMAG00000023382	exosc1	93	64.921	Xiphophorus_maculatus