EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000000488 (Gene tree)
Gene ID: -
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 5493 bases
Position: chrGeneScaffold_1636:109733-115225
Accession: 17948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000000437	CSD	PF00313.22	2.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000000484	YBX2-201	1077	-	ENSSARP00000000437	358 (aa)	-	UPI000158249A

Gene Model

Click here to download ENSSARG00000000488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000000488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000000488	YBX2	84	89.286	ENSG00000006047	YBX2	99	85.890	Homo_sapiens
ENSSARG00000000488	YBX2	55	91.327	ENSAMEG00000016564	YBX2	90	91.414	Ailuropoda_melanoleuca
ENSSARG00000000488	YBX2	78	93.262	ENSANAG00000019540	YBX2	86	92.808	Aotus_nancymaae
ENSSARG00000000488	YBX2	100	96.111	ENSBTAG00000009126	YBX2	100	96.111	Bos_taurus
ENSSARG00000000488	YBX2	76	89.051	ENSCJAG00000042146	-	97	89.416	Callithrix_jacchus
ENSSARG00000000488	YBX2	84	91.722	ENSCJAG00000016581	-	86	90.584	Callithrix_jacchus
ENSSARG00000000488	YBX2	100	95.640	ENSCAFG00000016128	-	100	95.640	Canis_familiaris
ENSSARG00000000488	YBX2	70	78.261	ENSCAFG00000005162	-	90	74.144	Canis_familiaris
ENSSARG00000000488	YBX2	84	92.233	ENSCAFG00020008884	YBX2	90	92.169	Canis_lupus_dingo
ENSSARG00000000488	YBX2	100	95.556	ENSCHIG00000016407	YBX2	100	95.556	Capra_hircus
ENSSARG00000000488	YBX2	75	90.146	ENSTSYG00000030765	YBX2	92	90.146	Carlito_syrichta
ENSSARG00000000488	YBX2	74	96.255	ENSCAPG00000011432	YBX2	100	96.255	Cavia_aperea
ENSSARG00000000488	YBX2	84	96.026	ENSCPOG00000009543	YBX2	96	95.556	Cavia_porcellus
ENSSARG00000000488	YBX2	84	94.702	ENSCCAG00000025671	YBX2	85	94.481	Cebus_capucinus
ENSSARG00000000488	YBX2	84	93.709	ENSCATG00000036919	YBX2	86	93.831	Cercocebus_atys
ENSSARG00000000488	YBX2	75	96.296	ENSCLAG00000010306	YBX2	96	96.296	Chinchilla_lanigera
ENSSARG00000000488	YBX2	84	93.709	ENSCSAG00000011857	YBX2	86	93.831	Chlorocebus_sabaeus
ENSSARG00000000488	YBX2	71	69.112	ENSCPBG00000022288	YBX2	81	70.930	Chrysemys_picta_bellii
ENSSARG00000000488	YBX2	74	92.164	ENSCANG00000007129	YBX2	97	92.164	Colobus_angolensis_palliatus
ENSSARG00000000488	YBX2	100	96.111	ENSCGRG00001000751	Ybx2	100	96.111	Cricetulus_griseus_chok1gshd
ENSSARG00000000488	YBX2	75	95.926	ENSCGRG00000007683	Ybx2	99	95.926	Cricetulus_griseus_crigri
ENSSARG00000000488	YBX2	75	90.706	ENSDNOG00000013746	YBX2	99	84.641	Dasypus_novemcinctus
ENSSARG00000000488	YBX2	74	96.642	ENSDORG00000010882	Ybx2	95	96.642	Dipodomys_ordii
ENSSARG00000000488	YBX2	54	89.189	ENSETEG00000014271	YBX2	51	90.769	Echinops_telfairi
ENSSARG00000000488	YBX2	88	91.167	ENSEASG00005018928	YBX2	90	91.167	Equus_asinus_asinus
ENSSARG00000000488	YBX2	90	89.571	ENSECAG00000009996	YBX2	85	89.571	Equus_caballus
ENSSARG00000000488	YBX2	82	96.970	ENSFCAG00000018097	YBX2	87	96.429	Felis_catus
ENSSARG00000000488	YBX2	68	68.421	ENSGAGG00000016159	YBX2	86	74.494	Gopherus_agassizii
ENSSARG00000000488	YBX2	84	91.391	ENSGGOG00000007399	YBX2	86	91.558	Gorilla_gorilla
ENSSARG00000000488	YBX2	84	94.040	ENSHGLG00000014186	YBX2	91	92.923	Heterocephalus_glaber_female
ENSSARG00000000488	YBX2	75	97.037	ENSSTOG00000008630	YBX2	99	97.037	Ictidomys_tridecemlineatus
ENSSARG00000000488	YBX2	75	97.398	ENSJJAG00000013072	Ybx2	95	97.398	Jaculus_jaculus
ENSSARG00000000488	YBX2	100	96.944	ENSLAFG00000014006	YBX2	100	96.944	Loxodonta_africana
ENSSARG00000000488	YBX2	84	93.709	ENSMFAG00000039921	YBX2	86	93.831	Macaca_fascicularis
ENSSARG00000000488	YBX2	84	93.709	ENSMNEG00000045221	YBX2	86	93.831	Macaca_nemestrina
ENSSARG00000000488	YBX2	77	73.285	ENSMLEG00000029266	-	84	72.924	Mandrillus_leucophaeus
ENSSARG00000000488	YBX2	87	83.439	ENSMLEG00000039452	YBX2	97	93.284	Mandrillus_leucophaeus
ENSSARG00000000488	YBX2	100	96.111	ENSMAUG00000022062	Ybx2	100	96.111	Mesocricetus_auratus
ENSSARG00000000488	YBX2	84	95.349	ENSMICG00000012453	YBX2	97	95.880	Microcebus_murinus
ENSSARG00000000488	YBX2	100	96.111	ENSMOCG00000013958	Ybx2	100	96.111	Microtus_ochrogaster
ENSSARG00000000488	YBX2	77	76.758	ENSMODG00000017596	YBX2	83	86.799	Monodelphis_domestica
ENSSARG00000000488	YBX2	100	96.111	MGP_CAROLIEiJ_G0016606	Ybx2	100	96.111	Mus_caroli
ENSSARG00000000488	YBX2	100	96.111	ENSMUSG00000018554	Ybx2	100	96.111	Mus_musculus
ENSSARG00000000488	YBX2	100	96.111	MGP_PahariEiJ_G0017737	Ybx2	100	96.111	Mus_pahari
ENSSARG00000000488	YBX2	100	96.111	MGP_SPRETEiJ_G0017442	Ybx2	100	96.111	Mus_spretus
ENSSARG00000000488	YBX2	68	90.612	ENSMPUG00000010386	YBX2	93	90.612	Mustela_putorius_furo
ENSSARG00000000488	YBX2	93	87.463	ENSMLUG00000004686	YBX2	92	88.961	Myotis_lucifugus
ENSSARG00000000488	YBX2	84	95.033	ENSNGAG00000011707	Ybx2	87	95.130	Nannospalax_galili
ENSSARG00000000488	YBX2	83	93.667	ENSNLEG00000008063	-	100	92.333	Nomascus_leucogenys
ENSSARG00000000488	YBX2	77	87.726	ENSMEUG00000006947	YBX2	91	86.275	Notamacropus_eugenii
ENSSARG00000000488	YBX2	80	90.345	ENSOPRG00000013773	YBX2	100	90.000	Ochotona_princeps
ENSSARG00000000488	YBX2	84	94.371	ENSODEG00000017530	YBX2	96	94.815	Octodon_degus
ENSSARG00000000488	YBX2	87	84.345	ENSOCUG00000015064	YBX2	99	85.113	Oryctolagus_cuniculus
ENSSARG00000000488	YBX2	74	97.015	ENSOGAG00000004392	YBX2	100	97.015	Otolemur_garnettii
ENSSARG00000000488	YBX2	77	95.307	ENSOARG00000011562	YBX2	78	95.307	Ovis_aries
ENSSARG00000000488	YBX2	82	89.369	ENSPPAG00000041892	YBX2	100	89.369	Pan_paniscus
ENSSARG00000000488	YBX2	100	96.122	ENSPPRG00000000782	YBX2	100	96.122	Panthera_pardus
ENSSARG00000000488	YBX2	84	89.935	ENSPTRG00000008673	YBX2	86	89.809	Pan_troglodytes
ENSSARG00000000488	YBX2	87	79.553	ENSPTRG00000051288	-	85	89.850	Pan_troglodytes
ENSSARG00000000488	YBX2	83	93.645	ENSPANG00000024250	YBX2	86	93.506	Papio_anubis
ENSSARG00000000488	YBX2	77	71.273	ENSPANG00000032747	-	75	67.774	Papio_anubis
ENSSARG00000000488	YBX2	74	66.078	ENSPSIG00000012364	YBX2	99	73.913	Pelodiscus_sinensis
ENSSARG00000000488	YBX2	77	82.310	ENSPCIG00000028819	YBX2	85	89.958	Phascolarctos_cinereus
ENSSARG00000000488	YBX2	85	94.771	ENSPCAG00000008019	YBX2	85	94.805	Procavia_capensis
ENSSARG00000000488	YBX2	83	93.980	ENSPCOG00000006030	YBX2	90	92.593	Propithecus_coquereli
ENSSARG00000000488	YBX2	100	87.258	ENSPVAG00000005050	YBX2	100	87.258	Pteropus_vampyrus
ENSSARG00000000488	YBX2	84	96.689	ENSRNOG00000017117	Ybx2	86	96.753	Rattus_norvegicus
ENSSARG00000000488	YBX2	84	93.377	ENSRBIG00000040919	YBX2	87	93.506	Rhinopithecus_bieti
ENSSARG00000000488	YBX2	80	81.818	ENSRROG00000041728	YBX2	99	81.818	Rhinopithecus_roxellana
ENSSARG00000000488	YBX2	83	87.000	ENSSBOG00000029566	YBX2	97	93.657	Saimiri_boliviensis_boliviensis
ENSSARG00000000488	YBX2	77	86.429	ENSSHAG00000007786	YBX2	95	85.333	Sarcophilus_harrisii
ENSSARG00000000488	YBX2	81	64.189	ENSSPUG00000018250	YBX2	99	66.667	Sphenodon_punctatus
ENSSARG00000000488	YBX2	100	96.111	ENSSSCG00000017938	YBX2	100	96.111	Sus_scrofa
ENSSARG00000000488	YBX2	83	92.333	ENSTBEG00000001266	YBX2	91	92.532	Tupaia_belangeri
ENSSARG00000000488	YBX2	55	98.969	ENSTTRG00000009780	YBX2	57	99.029	Tursiops_truncatus
ENSSARG00000000488	YBX2	72	89.811	ENSUAMG00000014725	YBX2	100	89.811	Ursus_americanus
ENSSARG00000000488	YBX2	68	88.048	ENSUMAG00000015222	YBX2	90	88.048	Ursus_maritimus
ENSSARG00000000488	YBX2	70	85.039	ENSVVUG00000012111	-	78	84.646	Vulpes_vulpes
ENSSARG00000000488	YBX2	72	89.925	ENSVVUG00000027830	-	100	89.925	Vulpes_vulpes