EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000000738 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Minus strand
Length
26540 bases
Position
chrGeneScaffold_2152:199997-226536
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000000680CSDPF00313.223.1e-8315
ENSSARP00000000680CSDPF00313.223.1e-8325
ENSSARP00000000680CSDPF00313.223.1e-8335
ENSSARP00000000680CSDPF00313.223.1e-8345
ENSSARP00000000680CSDPF00313.223.1e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000000742CSDE1-2012433-ENSSARP00000000680810 (aa)-UPI00015824C2
Gene Model
Click here to download ENSSARG00000000738's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000000738's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000000738CSDE110096.806ENSG00000009307CSDE1100100.000Homo_sapiens
ENSSARG00000000738CSDE19477.273ENSAPOG00000015538csde110077.273Acanthochromis_polyacanthus
ENSSARG00000000738CSDE110095.583ENSAMEG00000017129CSDE110095.583Ailuropoda_melanoleuca
ENSSARG00000000738CSDE18575.946ENSACIG00000015175csde110075.946Amphilophus_citrinellus
ENSSARG00000000738CSDE19477.403ENSAOCG00000011510csde110077.403Amphiprion_ocellaris
ENSSARG00000000738CSDE19972.438ENSAPEG00000007194csde110077.403Amphiprion_percula
ENSSARG00000000738CSDE19477.013ENSATEG00000003864csde110077.013Anabas_testudineus
ENSSARG00000000738CSDE19491.917ENSAPLG00000008797CSDE110091.917Anas_platyrhynchos
ENSSARG00000000738CSDE19488.596ENSACAG00000003120CSDE110088.596Anolis_carolinensis
ENSSARG00000000738CSDE110096.560ENSANAG00000024665CSDE110096.560Aotus_nancymaae
ENSSARG00000000738CSDE18573.050ENSANAG00000028396-9073.050Aotus_nancymaae
ENSSARG00000000738CSDE19476.983ENSACLG00000013296csde110076.983Astatotilapia_calliptera
ENSSARG00000000738CSDE19476.524ENSAMXG00000007436csde110076.524Astyanax_mexicanus
ENSSARG00000000738CSDE110093.136ENSBTAG00000000678CSDE110097.653Bos_taurus
ENSSARG00000000738CSDE110096.683ENSCJAG00000012565CSDE110096.683Callithrix_jacchus
ENSSARG00000000738CSDE19896.746ENSCAFG00000009618CSDE110096.746Canis_familiaris
ENSSARG00000000738CSDE19497.784ENSCAFG00020000481CSDE110097.784Canis_lupus_dingo
ENSSARG00000000738CSDE110096.560ENSCHIG00000017250CSDE110097.653Capra_hircus
ENSSARG00000000738CSDE110093.018ENSTSYG00000003747CSDE110098.044Carlito_syrichta
ENSSARG00000000738CSDE19468.687ENSCAPG00000015128CSDE110068.687Cavia_aperea
ENSSARG00000000738CSDE19491.635ENSCPOG00000040388CSDE110091.635Cavia_porcellus
ENSSARG00000000738CSDE19173.483ENSCCAG00000030878-9173.483Cebus_capucinus
ENSSARG00000000738CSDE110096.683ENSCCAG00000036794CSDE110097.105Cebus_capucinus
ENSSARG00000000738CSDE19075.000ENSCCAG00000033677-9974.584Cebus_capucinus
ENSSARG00000000738CSDE110096.806ENSCATG00000036962CSDE110096.806Cercocebus_atys
ENSSARG00000000738CSDE19497.914ENSCLAG00000006618CSDE110097.914Chinchilla_lanigera
ENSSARG00000000738CSDE110093.254ENSCSAG00000001658CSDE110093.254Chlorocebus_sabaeus
ENSSARG00000000738CSDE110090.079ENSCHOG00000000918CSDE19490.079Choloepus_hoffmanni
ENSSARG00000000738CSDE19492.308ENSCPBG00000016547CSDE110092.308Chrysemys_picta_bellii
ENSSARG00000000738CSDE19141.328ENSCING00000014465-9841.328Ciona_intestinalis
ENSSARG00000000738CSDE19041.885ENSCSAVG00000008100-9841.885Ciona_savignyi
ENSSARG00000000738CSDE110096.929ENSCANG00000035096CSDE110096.929Colobus_angolensis_palliatus
ENSSARG00000000738CSDE18495.539ENSCANG00000031069-10091.590Colobus_angolensis_palliatus
ENSSARG00000000738CSDE19497.523ENSCGRG00001016833-10097.523Cricetulus_griseus_chok1gshd
ENSSARG00000000738CSDE19481.913ENSCGRG00001014011-10081.913Cricetulus_griseus_chok1gshd
ENSSARG00000000738CSDE19196.659ENSCGRG00000002225-10096.659Cricetulus_griseus_crigri
ENSSARG00000000738CSDE19484.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSSARG00000000738CSDE19476.853ENSCSEG00000002620csde110076.853Cynoglossus_semilaevis
ENSSARG00000000738CSDE19971.938ENSCVAG00000001344csde110076.494Cyprinodon_variegatus
ENSSARG00000000738CSDE19971.001ENSDARG00000074758csde110074.969Danio_rerio
ENSSARG00000000738CSDE17575.934ENSDNOG00000034464-10075.934Dasypus_novemcinctus
ENSSARG00000000738CSDE19597.150ENSDNOG00000010287-9497.150Dasypus_novemcinctus
ENSSARG00000000738CSDE19396.856ENSDORG00000011609Csde110096.856Dipodomys_ordii
ENSSARG00000000738CSDE19148.517FBgn0263352Unr7448.319Drosophila_melanogaster
ENSSARG00000000738CSDE19477.559ENSETEG00000013678-9977.559Echinops_telfairi
ENSSARG00000000738CSDE17469.500ENSETEG00000007109-9969.500Echinops_telfairi
ENSSARG00000000738CSDE18588.057ENSETEG00000006280-10088.057Echinops_telfairi
ENSSARG00000000738CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSSARG00000000738CSDE19454.064ENSEBUG00000008647csde19952.387Eptatretus_burgeri
ENSSARG00000000738CSDE110096.192ENSEASG00005006284CSDE110096.192Equus_asinus_asinus
ENSSARG00000000738CSDE110096.192ENSECAG00000020885CSDE19997.893Equus_caballus
ENSSARG00000000738CSDE19398.953ENSEEUG00000006286CSDE17498.953Erinaceus_europaeus
ENSSARG00000000738CSDE19475.420ENSELUG00000015507csde110075.420Esox_lucius
ENSSARG00000000738CSDE110097.052ENSFCAG00000029266CSDE110098.044Felis_catus
ENSSARG00000000738CSDE19488.221ENSFALG00000003407CSDE110088.221Ficedula_albicollis
ENSSARG00000000738CSDE19397.455ENSFDAG00000007882CSDE110097.455Fukomys_damarensis
ENSSARG00000000738CSDE19971.783ENSFHEG00000010799csde19976.923Fundulus_heteroclitus
ENSSARG00000000738CSDE19473.777ENSGMOG00000012731csde110073.777Gadus_morhua
ENSSARG00000000738CSDE19287.980ENSGALG00000002139CSDE19887.980Gallus_gallus
ENSSARG00000000738CSDE18776.067ENSGAFG00000005241csde19576.067Gambusia_affinis
ENSSARG00000000738CSDE19474.812ENSGACG00000004544csde110074.812Gasterosteus_aculeatus
ENSSARG00000000738CSDE110089.435ENSGAGG00000017685CSDE110088.346Gopherus_agassizii
ENSSARG00000000738CSDE110096.806ENSGGOG00000002164CSDE110097.914Gorilla_gorilla
ENSSARG00000000738CSDE19972.057ENSHBUG00000020315csde110076.983Haplochromis_burtoni
ENSSARG00000000738CSDE19385.337ENSHGLG00000007471-9885.337Heterocephalus_glaber_female
ENSSARG00000000738CSDE19487.875ENSHGLG00000009620-10088.136Heterocephalus_glaber_female
ENSSARG00000000738CSDE19488.396ENSHGLG00000003829-10088.396Heterocephalus_glaber_female
ENSSARG00000000738CSDE19188.196ENSHGLG00000010039-10088.196Heterocephalus_glaber_female
ENSSARG00000000738CSDE19479.569ENSHGLG00000019549-10079.569Heterocephalus_glaber_female
ENSSARG00000000738CSDE19475.408ENSHGLG00000000650-9975.533Heterocephalus_glaber_female
ENSSARG00000000738CSDE19388.024ENSHGLG00000008555-10088.024Heterocephalus_glaber_female
ENSSARG00000000738CSDE19479.975ENSHGLG00100002245-9979.975Heterocephalus_glaber_male
ENSSARG00000000738CSDE19479.581ENSHGLG00100001846-10079.581Heterocephalus_glaber_male
ENSSARG00000000738CSDE19181.069ENSHGLG00100004833-10081.069Heterocephalus_glaber_male
ENSSARG00000000738CSDE19382.695ENSHGLG00100007287-9882.695Heterocephalus_glaber_male
ENSSARG00000000738CSDE19497.914ENSHGLG00100019438-10097.914Heterocephalus_glaber_male
ENSSARG00000000738CSDE18882.845ENSHGLG00100004195-10082.845Heterocephalus_glaber_male
ENSSARG00000000738CSDE19187.973ENSHGLG00100006910-10087.973Heterocephalus_glaber_male
ENSSARG00000000738CSDE19483.572ENSHGLG00100012072-10083.572Heterocephalus_glaber_male
ENSSARG00000000738CSDE19971.667ENSHCOG00000004158csde110075.943Hippocampus_comes
ENSSARG00000000738CSDE19476.524ENSIPUG00000000355csde110076.524Ictalurus_punctatus
ENSSARG00000000738CSDE19479.540ENSSTOG00000030994-10079.540Ictidomys_tridecemlineatus
ENSSARG00000000738CSDE18692.308ENSSTOG00000032722-9892.308Ictidomys_tridecemlineatus
ENSSARG00000000738CSDE19397.006ENSJJAG00000019571Csde110097.006Jaculus_jaculus
ENSSARG00000000738CSDE19972.209ENSKMAG00000005685csde110073.482Kryptolebias_marmoratus
ENSSARG00000000738CSDE19477.273ENSLBEG00000014770csde110077.273Labrus_bergylta
ENSSARG00000000738CSDE19774.849ENSLACG00000018452CSDE19674.909Latimeria_chalumnae
ENSSARG00000000738CSDE110075.000ENSLOCG00000010413csde19676.847Lepisosteus_oculatus
ENSSARG00000000738CSDE19596.109ENSLAFG00000007150CSDE19696.109Loxodonta_africana
ENSSARG00000000738CSDE110096.806ENSMFAG00000003674CSDE110097.914Macaca_fascicularis
ENSSARG00000000738CSDE110096.806ENSMMUG00000001974CSDE110097.914Macaca_mulatta
ENSSARG00000000738CSDE110096.806ENSMNEG00000045247CSDE110096.806Macaca_nemestrina
ENSSARG00000000738CSDE110096.560ENSMLEG00000038673CSDE110096.560Mandrillus_leucophaeus
ENSSARG00000000738CSDE19477.922ENSMAMG00000008821csde110077.922Mastacembelus_armatus
ENSSARG00000000738CSDE19972.640ENSMZEG00005021675csde110076.983Maylandia_zebra
ENSSARG00000000738CSDE19491.667ENSMGAG00000016381CSDE110091.667Meleagris_gallopavo
ENSSARG00000000738CSDE19397.305ENSMAUG00000014031Csde110097.305Mesocricetus_auratus
ENSSARG00000000738CSDE110096.437ENSMICG00000002050CSDE110096.437Microcebus_murinus
ENSSARG00000000738CSDE19497.523ENSMOCG00000018960Csde110097.523Microtus_ochrogaster
ENSSARG00000000738CSDE19477.273ENSMMOG00000015075csde110077.273Mola_mola
ENSSARG00000000738CSDE19595.343ENSMODG00000004685CSDE110091.855Monodelphis_domestica
ENSSARG00000000738CSDE19477.403ENSMALG00000007132csde110077.403Monopterus_albus
ENSSARG00000000738CSDE19497.392MGP_CAROLIEiJ_G0025444Csde110097.392Mus_caroli
ENSSARG00000000738CSDE19497.392ENSMUSG00000068823Csde110097.392Mus_musculus
ENSSARG00000000738CSDE19497.653MGP_PahariEiJ_G0026888Csde110097.653Mus_pahari
ENSSARG00000000738CSDE19497.653MGP_SPRETEiJ_G0026394Csde110097.653Mus_spretus
ENSSARG00000000738CSDE19294.125ENSMPUG00000005753CSDE19994.125Mustela_putorius_furo
ENSSARG00000000738CSDE110095.946ENSMLUG00000005681CSDE110095.946Myotis_lucifugus
ENSSARG00000000738CSDE19169.042ENSNGAG00000012599-10069.042Nannospalax_galili
ENSSARG00000000738CSDE19397.156ENSNGAG00000021929Csde110097.156Nannospalax_galili
ENSSARG00000000738CSDE19476.983ENSNBRG00000020808csde110076.983Neolamprologus_brichardi
ENSSARG00000000738CSDE110096.683ENSNLEG00000004842CSDE110096.683Nomascus_leucogenys
ENSSARG00000000738CSDE19291.223ENSMEUG00000002677CSDE110091.223Notamacropus_eugenii
ENSSARG00000000738CSDE19892.659ENSOPRG00000005002CSDE18892.659Ochotona_princeps
ENSSARG00000000738CSDE19397.305ENSODEG00000007383-10097.305Octodon_degus
ENSSARG00000000738CSDE19166.372ENSODEG00000005979-9866.372Octodon_degus
ENSSARG00000000738CSDE19472.460ENSONIG00000009309csde110072.460Oreochromis_niloticus
ENSSARG00000000738CSDE19475.436ENSOANG00000003346-10075.436Ornithorhynchus_anatinus
ENSSARG00000000738CSDE110092.426ENSOCUG00000016438CSDE110092.426Oryctolagus_cuniculus
ENSSARG00000000738CSDE19477.373ENSORLG00000000707csde110077.373Oryzias_latipes
ENSSARG00000000738CSDE110071.795ENSORLG00020005148csde110072.705Oryzias_latipes_hni
ENSSARG00000000738CSDE110071.795ENSORLG00015019415csde110077.373Oryzias_latipes_hsok
ENSSARG00000000738CSDE19477.662ENSOMEG00000015656csde110077.662Oryzias_melastigma
ENSSARG00000000738CSDE110096.683ENSOGAG00000012127CSDE110096.683Otolemur_garnettii
ENSSARG00000000738CSDE110096.683ENSOARG00000020034CSDE110096.683Ovis_aries
ENSSARG00000000738CSDE110096.806ENSPPAG00000025861CSDE110097.914Pan_paniscus
ENSSARG00000000738CSDE110097.052ENSPPRG00000006747CSDE110097.052Panthera_pardus
ENSSARG00000000738CSDE110097.052ENSPTIG00000015468CSDE110097.052Panthera_tigris_altaica
ENSSARG00000000738CSDE110096.929ENSPTRG00000033721CSDE110096.929Pan_troglodytes
ENSSARG00000000738CSDE110096.806ENSPANG00000018873CSDE110097.914Papio_anubis
ENSSARG00000000738CSDE19476.593ENSPKIG00000009459csde110076.593Paramormyrops_kingsleyae
ENSSARG00000000738CSDE19089.159ENSPSIG00000003823CSDE19689.159Pelodiscus_sinensis
ENSSARG00000000738CSDE19476.753ENSPMGG00000000772csde110076.753Periophthalmus_magnuspinnatus
ENSSARG00000000738CSDE19397.605ENSPEMG00000020357-10097.605Peromyscus_maniculatus_bairdii
ENSSARG00000000738CSDE19691.739ENSPCIG00000022587CSDE110091.980Phascolarctos_cinereus
ENSSARG00000000738CSDE19375.264ENSPFOG00000012664csde110075.311Poecilia_formosa
ENSSARG00000000738CSDE19170.814ENSPLAG00000017680csde19370.814Poecilia_latipinna
ENSSARG00000000738CSDE19270.713ENSPMEG00000005094csde19670.713Poecilia_mexicana
ENSSARG00000000738CSDE19971.734ENSPREG00000011631csde110071.119Poecilia_reticulata
ENSSARG00000000738CSDE19493.985ENSPPYG00000000996CSDE110093.985Pongo_abelii
ENSSARG00000000738CSDE110092.015ENSPCAG00000014368CSDE110092.015Procavia_capensis
ENSSARG00000000738CSDE19497.914ENSPCOG00000017893CSDE110097.914Propithecus_coquereli
ENSSARG00000000738CSDE18583.955ENSPCOG00000008223-9083.955Propithecus_coquereli
ENSSARG00000000738CSDE110090.786ENSPVAG00000008225CSDE110090.786Pteropus_vampyrus
ENSSARG00000000738CSDE19972.057ENSPNYG00000013745csde110076.983Pundamilia_nyererei
ENSSARG00000000738CSDE19477.143ENSPNAG00000001958csde110077.143Pygocentrus_nattereri
ENSSARG00000000738CSDE19493.734ENSRNOG00000061058Csde110093.734Rattus_norvegicus
ENSSARG00000000738CSDE19494.141ENSRBIG00000038088-9995.622Rhinopithecus_bieti
ENSSARG00000000738CSDE110091.422ENSRBIG00000038966-10091.422Rhinopithecus_bieti
ENSSARG00000000738CSDE110096.806ENSRROG00000043101CSDE110096.806Rhinopithecus_roxellana
ENSSARG00000000738CSDE110096.683ENSSBOG00000035592CSDE110096.683Saimiri_boliviensis_boliviensis
ENSSARG00000000738CSDE19695.256ENSSHAG00000009831CSDE110095.567Sarcophilus_harrisii
ENSSARG00000000738CSDE19476.983ENSSFOG00015007498csde110076.983Scleropages_formosus
ENSSARG00000000738CSDE19477.792ENSSMAG00000007203csde110077.792Scophthalmus_maximus
ENSSARG00000000738CSDE19477.273ENSSDUG00000015380csde110077.273Seriola_dumerili
ENSSARG00000000738CSDE19477.273ENSSLDG00000008819csde110077.273Seriola_lalandi_dorsalis
ENSSARG00000000738CSDE19491.786ENSSPUG00000008714CSDE110091.786Sphenodon_punctatus
ENSSARG00000000738CSDE19972.803ENSSPAG00000000716csde110077.273Stegastes_partitus
ENSSARG00000000738CSDE110093.373ENSSSCG00000006752CSDE110098.044Sus_scrofa
ENSSARG00000000738CSDE19487.250ENSTGUG00000000972CSDE110087.250Taeniopygia_guttata
ENSSARG00000000738CSDE19473.992ENSTRUG00000007996csde110073.992Takifugu_rubripes
ENSSARG00000000738CSDE18773.946ENSTNIG00000010878csde110073.946Tetraodon_nigroviridis
ENSSARG00000000738CSDE18298.718ENSTBEG00000011880-6698.718Tupaia_belangeri
ENSSARG00000000738CSDE110096.192ENSTTRG00000015583CSDE110096.192Tursiops_truncatus
ENSSARG00000000738CSDE18493.398ENSUAMG00000024289-9993.398Ursus_americanus
ENSSARG00000000738CSDE18499.035ENSUAMG00000021779-10099.035Ursus_americanus
ENSSARG00000000738CSDE19590.272ENSUMAG00000009720-9890.272Ursus_maritimus
ENSSARG00000000738CSDE18197.387ENSUMAG00000011714-9997.387Ursus_maritimus
ENSSARG00000000738CSDE110098.122ENSVPAG00000000749CSDE18598.122Vicugna_pacos
ENSSARG00000000738CSDE18792.982ENSVVUG00000009890CSDE19492.982Vulpes_vulpes
ENSSARG00000000738CSDE19481.898ENSXETG00000021448csde110081.898Xenopus_tropicalis
ENSSARG00000000738CSDE18785.455ENSXCOG00000000035csde18885.455Xiphophorus_couchianus
ENSSARG00000000738CSDE19972.771ENSXMAG00000009080csde19877.454Xiphophorus_maculatus

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