EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000000842 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 176284 bases
Position: chrGeneScaffold_1222:28831-205114
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000000779	ResIII	PF04851.15	3.1e-12	1	1
ENSSARP00000000779	DEAD	PF00270.29	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000000846	SMARCA1-201	2994	-	ENSSARP00000000779	997 (aa)	-	UPI0001582249

Gene Model

Click here to download ENSSARG00000000842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000000842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000000842	SMARCA1	92	90.399	ENSG00000102038	SMARCA1	87	90.399	Homo_sapiens
ENSSARG00000000842	SMARCA1	81	83.986	ENSAPOG00000016035	smarca5	88	83.986	Acanthochromis_polyacanthus
ENSSARG00000000842	SMARCA1	91	88.991	ENSAMEG00000015218	SMARCA1	85	88.991	Ailuropoda_melanoleuca
ENSSARG00000000842	SMARCA1	80	84.074	ENSACIG00000016982	smarca5	89	84.074	Amphilophus_citrinellus
ENSSARG00000000842	SMARCA1	81	83.986	ENSAOCG00000015578	smarca5	78	83.986	Amphiprion_ocellaris
ENSSARG00000000842	SMARCA1	81	83.986	ENSAPEG00000011117	smarca5	88	85.116	Amphiprion_percula
ENSSARG00000000842	SMARCA1	83	84.342	ENSATEG00000012894	smarca5	80	84.342	Anabas_testudineus
ENSSARG00000000842	SMARCA1	81	92.199	ENSAPLG00000013149	SMARCA1	83	92.199	Anas_platyrhynchos
ENSSARG00000000842	SMARCA1	91	83.824	ENSACAG00000011376	SMARCA1	86	83.824	Anolis_carolinensis
ENSSARG00000000842	SMARCA1	91	83.670	ENSANAG00000023098	SMARCA1	86	83.670	Aotus_nancymaae
ENSSARG00000000842	SMARCA1	81	84.698	ENSACLG00000025356	smarca5	78	84.698	Astatotilapia_calliptera
ENSSARG00000000842	SMARCA1	81	84.342	ENSAMXG00000005709	smarca5	78	84.342	Astyanax_mexicanus
ENSSARG00000000842	SMARCA1	83	88.968	ENSAMXG00000011227	smarca1	90	90.233	Astyanax_mexicanus
ENSSARG00000000842	SMARCA1	92	90.476	ENSBTAG00000002292	SMARCA1	87	90.476	Bos_taurus
ENSSARG00000000842	SMARCA1	83	63.830	WBGene00002169	isw-1	82	63.830	Caenorhabditis_elegans
ENSSARG00000000842	SMARCA1	92	89.908	ENSCJAG00000002868	SMARCA1	85	89.908	Callithrix_jacchus
ENSSARG00000000842	SMARCA1	88	87.867	ENSCAFG00000018673	SMARCA1	87	97.209	Canis_familiaris
ENSSARG00000000842	SMARCA1	92	88.807	ENSCAFG00020001751	SMARCA1	85	88.807	Canis_lupus_dingo
ENSSARG00000000842	SMARCA1	92	90.580	ENSCHIG00000009837	SMARCA1	87	90.580	Capra_hircus
ENSSARG00000000842	SMARCA1	87	96.809	ENSTSYG00000004240	SMARCA1	85	96.809	Carlito_syrichta
ENSSARG00000000842	SMARCA1	92	90.217	ENSCPOG00000013601	SMARCA1	88	90.217	Cavia_porcellus
ENSSARG00000000842	SMARCA1	88	90.275	ENSCCAG00000030817	SMARCA1	84	90.275	Cebus_capucinus
ENSSARG00000000842	SMARCA1	92	90.275	ENSCATG00000015921	SMARCA1	87	88.406	Cercocebus_atys
ENSSARG00000000842	SMARCA1	92	90.399	ENSCLAG00000002171	SMARCA1	87	90.399	Chinchilla_lanigera
ENSSARG00000000842	SMARCA1	92	88.257	ENSCSAG00000008460	SMARCA1	85	88.257	Chlorocebus_sabaeus
ENSSARG00000000842	SMARCA1	91	84.743	ENSCPBG00000001146	SMARCA1	85	84.743	Chrysemys_picta_bellii
ENSSARG00000000842	SMARCA1	82	75.532	ENSCING00000004110	swi/snf	80	75.532	Ciona_intestinalis
ENSSARG00000000842	SMARCA1	77	83.908	ENSCSAVG00000004620	-	84	83.908	Ciona_savignyi
ENSSARG00000000842	SMARCA1	92	90.275	ENSCANG00000007183	SMARCA1	85	90.275	Colobus_angolensis_palliatus
ENSSARG00000000842	SMARCA1	92	89.674	ENSCGRG00001010776	Smarca1	87	89.674	Cricetulus_griseus_chok1gshd
ENSSARG00000000842	SMARCA1	92	89.674	ENSCGRG00000015301	Smarca1	91	89.674	Cricetulus_griseus_crigri
ENSSARG00000000842	SMARCA1	83	84.342	ENSCSEG00000000328	smarca5	79	84.342	Cynoglossus_semilaevis
ENSSARG00000000842	SMARCA1	81	84.698	ENSCVAG00000008668	smarca5	88	85.185	Cyprinodon_variegatus
ENSSARG00000000842	SMARCA1	83	87.900	ENSDARG00000012776	smarca1	80	87.900	Danio_rerio
ENSSARG00000000842	SMARCA1	81	83.274	ENSDARG00000052348	smarca5	78	83.274	Danio_rerio
ENSSARG00000000842	SMARCA1	92	87.363	ENSDNOG00000004315	SMARCA1	87	87.363	Dasypus_novemcinctus
ENSSARG00000000842	SMARCA1	92	87.681	ENSDORG00000009270	Smarca1	87	87.681	Dipodomys_ordii
ENSSARG00000000842	SMARCA1	81	75.532	FBgn0011604	Iswi	80	75.532	Drosophila_melanogaster
ENSSARG00000000842	SMARCA1	62	98.742	ENSETEG00000017426	SMARCA1	64	98.742	Echinops_telfairi
ENSSARG00000000842	SMARCA1	81	80.142	ENSEBUG00000001239	smarca5	81	80.142	Eptatretus_burgeri
ENSSARG00000000842	SMARCA1	85	97.080	ENSEASG00005008218	SMARCA1	89	90.203	Equus_asinus_asinus
ENSSARG00000000842	SMARCA1	92	88.624	ENSECAG00000012106	SMARCA1	85	88.624	Equus_caballus
ENSSARG00000000842	SMARCA1	68	98.492	ENSEEUG00000014927	SMARCA1	70	98.492	Erinaceus_europaeus
ENSSARG00000000842	SMARCA1	83	88.612	ENSELUG00000010515	smarca1	80	88.612	Esox_lucius
ENSSARG00000000842	SMARCA1	92	90.642	ENSFCAG00000018496	SMARCA1	85	90.642	Felis_catus
ENSSARG00000000842	SMARCA1	79	92.199	ENSFALG00000000209	SMARCA1	84	92.199	Ficedula_albicollis
ENSSARG00000000842	SMARCA1	92	90.217	ENSFDAG00000009818	SMARCA1	90	90.217	Fukomys_damarensis
ENSSARG00000000842	SMARCA1	81	85.053	ENSFHEG00000007687	smarca5	83	85.053	Fundulus_heteroclitus
ENSSARG00000000842	SMARCA1	90	85.038	ENSGALG00000008431	SMARCA1	89	84.432	Gallus_gallus
ENSSARG00000000842	SMARCA1	81	84.698	ENSGAFG00000017731	smarca5	78	84.698	Gambusia_affinis
ENSSARG00000000842	SMARCA1	83	92.553	ENSGAGG00000023575	SMARCA1	84	92.553	Gopherus_agassizii
ENSSARG00000000842	SMARCA1	67	96.000	ENSGGOG00000012841	-	85	96.000	Gorilla_gorilla
ENSSARG00000000842	SMARCA1	92	89.674	ENSHGLG00000003080	SMARCA1	87	89.674	Heterocephalus_glaber_female
ENSSARG00000000842	SMARCA1	91	89.674	ENSHGLG00100001102	SMARCA1	91	89.674	Heterocephalus_glaber_male
ENSSARG00000000842	SMARCA1	81	83.986	ENSHCOG00000005458	smarca5	78	83.986	Hippocampus_comes
ENSSARG00000000842	SMARCA1	81	88.256	ENSIPUG00000016905	Smarca1	83	88.256	Ictalurus_punctatus
ENSSARG00000000842	SMARCA1	81	83.986	ENSIPUG00000005229	SMARCA5	80	83.986	Ictalurus_punctatus
ENSSARG00000000842	SMARCA1	92	89.130	ENSSTOG00000014524	SMARCA1	79	97.518	Ictidomys_tridecemlineatus
ENSSARG00000000842	SMARCA1	86	97.518	ENSJJAG00000002593	Smarca1	80	97.518	Jaculus_jaculus
ENSSARG00000000842	SMARCA1	81	85.409	ENSKMAG00000003777	smarca5	78	85.409	Kryptolebias_marmoratus
ENSSARG00000000842	SMARCA1	81	84.342	ENSLBEG00000018112	smarca5	79	84.342	Labrus_bergylta
ENSSARG00000000842	SMARCA1	79	84.342	ENSLBEG00000013295	SMARCA1	90	84.577	Labrus_bergylta
ENSSARG00000000842	SMARCA1	92	82.084	ENSLACG00000016697	SMARCA1	89	82.084	Latimeria_chalumnae
ENSSARG00000000842	SMARCA1	81	90.036	ENSLOCG00000014591	smarca1	80	90.036	Lepisosteus_oculatus
ENSSARG00000000842	SMARCA1	84	97.163	ENSLAFG00000000896	SMARCA1	83	97.163	Loxodonta_africana
ENSSARG00000000842	SMARCA1	87	97.163	ENSMFAG00000002117	SMARCA1	90	88.406	Macaca_fascicularis
ENSSARG00000000842	SMARCA1	92	90.275	ENSMMUG00000008818	SMARCA1	85	97.163	Macaca_mulatta
ENSSARG00000000842	SMARCA1	87	97.163	ENSMNEG00000041768	SMARCA1	90	88.406	Macaca_nemestrina
ENSSARG00000000842	SMARCA1	92	90.275	ENSMLEG00000043198	SMARCA1	85	90.275	Mandrillus_leucophaeus
ENSSARG00000000842	SMARCA1	81	84.342	ENSMAMG00000014294	smarca5	78	84.342	Mastacembelus_armatus
ENSSARG00000000842	SMARCA1	81	84.698	ENSMZEG00005009369	smarca5	78	84.698	Maylandia_zebra
ENSSARG00000000842	SMARCA1	90	85.227	ENSMGAG00000007042	SMARCA1	90	84.899	Meleagris_gallopavo
ENSSARG00000000842	SMARCA1	92	90.217	ENSMAUG00000008133	Smarca1	87	90.217	Mesocricetus_auratus
ENSSARG00000000842	SMARCA1	92	90.642	ENSMICG00000015768	SMARCA1	85	90.642	Microcebus_murinus
ENSSARG00000000842	SMARCA1	86	97.163	ENSMOCG00000009464	Smarca1	87	90.217	Microtus_ochrogaster
ENSSARG00000000842	SMARCA1	81	83.630	ENSMMOG00000005547	smarca5	81	83.630	Mola_mola
ENSSARG00000000842	SMARCA1	83	91.844	ENSMODG00000013187	-	87	84.461	Monodelphis_domestica
ENSSARG00000000842	SMARCA1	81	83.986	ENSMALG00000002081	smarca5	82	81.533	Monopterus_albus
ENSSARG00000000842	SMARCA1	84	97.518	MGP_CAROLIEiJ_G0033034	Smarca1	83	95.880	Mus_caroli
ENSSARG00000000842	SMARCA1	87	97.518	ENSMUSG00000031099	Smarca1	83	95.880	Mus_musculus
ENSSARG00000000842	SMARCA1	84	97.872	MGP_PahariEiJ_G0031579	Smarca1	83	95.880	Mus_pahari
ENSSARG00000000842	SMARCA1	87	97.518	MGP_SPRETEiJ_G0034192	Smarca1	83	95.880	Mus_spretus
ENSSARG00000000842	SMARCA1	92	90.826	ENSMPUG00000017423	SMARCA1	81	90.826	Mustela_putorius_furo
ENSSARG00000000842	SMARCA1	92	88.117	ENSMLUG00000029614	SMARCA1	85	88.117	Myotis_lucifugus
ENSSARG00000000842	SMARCA1	92	90.399	ENSNGAG00000006492	Smarca1	81	97.518	Nannospalax_galili
ENSSARG00000000842	SMARCA1	81	84.698	ENSNBRG00000004463	smarca5	82	84.698	Neolamprologus_brichardi
ENSSARG00000000842	SMARCA1	92	90.092	ENSNLEG00000015179	SMARCA1	82	94.681	Nomascus_leucogenys
ENSSARG00000000842	SMARCA1	79	96.364	ENSMEUG00000008819	SMARCA1	83	96.364	Notamacropus_eugenii
ENSSARG00000000842	SMARCA1	92	89.674	ENSODEG00000012163	SMARCA1	87	89.674	Octodon_degus
ENSSARG00000000842	SMARCA1	81	84.698	ENSONIG00000009993	smarca5	78	84.698	Oreochromis_niloticus
ENSSARG00000000842	SMARCA1	83	92.908	ENSOANG00000002862	SMARCA1	84	92.908	Ornithorhynchus_anatinus
ENSSARG00000000842	SMARCA1	91	87.156	ENSOCUG00000001047	SMARCA1	85	87.156	Oryctolagus_cuniculus
ENSSARG00000000842	SMARCA1	81	83.986	ENSORLG00000021998	smarca5	78	83.986	Oryzias_latipes
ENSSARG00000000842	SMARCA1	81	83.986	ENSORLG00020017679	smarca5	78	83.986	Oryzias_latipes_hni
ENSSARG00000000842	SMARCA1	81	83.986	ENSORLG00015017210	smarca5	78	83.986	Oryzias_latipes_hsok
ENSSARG00000000842	SMARCA1	81	83.986	ENSOMEG00000000086	smarca5	78	83.986	Oryzias_melastigma
ENSSARG00000000842	SMARCA1	92	90.580	ENSOGAG00000004399	SMARCA1	87	90.580	Otolemur_garnettii
ENSSARG00000000842	SMARCA1	83	96.809	ENSOARG00000014638	SMARCA1	83	96.809	Ovis_aries
ENSSARG00000000842	SMARCA1	92	90.275	ENSPPAG00000034647	SMARCA1	85	90.275	Pan_paniscus
ENSSARG00000000842	SMARCA1	92	90.826	ENSPPRG00000008929	SMARCA1	85	90.826	Panthera_pardus
ENSSARG00000000842	SMARCA1	91	87.296	ENSPTIG00000000915	SMARCA1	88	87.296	Panthera_tigris_altaica
ENSSARG00000000842	SMARCA1	92	90.275	ENSPTRG00000049876	SMARCA1	87	88.406	Pan_troglodytes
ENSSARG00000000842	SMARCA1	92	90.275	ENSPANG00000003871	SMARCA1	85	90.275	Papio_anubis
ENSSARG00000000842	SMARCA1	83	83.986	ENSPKIG00000013411	smarca1	83	83.986	Paramormyrops_kingsleyae
ENSSARG00000000842	SMARCA1	91	85.110	ENSPSIG00000010101	SMARCA1	84	92.553	Pelodiscus_sinensis
ENSSARG00000000842	SMARCA1	92	90.399	ENSPEMG00000017503	Smarca1	81	97.518	Peromyscus_maniculatus_bairdii
ENSSARG00000000842	SMARCA1	92	84.489	ENSPCIG00000015460	SMARCA1	90	84.489	Phascolarctos_cinereus
ENSSARG00000000842	SMARCA1	81	85.053	ENSPFOG00000007649	smarca5	78	85.053	Poecilia_formosa
ENSSARG00000000842	SMARCA1	81	85.053	ENSPLAG00000003363	smarca5	78	85.053	Poecilia_latipinna
ENSSARG00000000842	SMARCA1	81	84.698	ENSPMEG00000019849	smarca5	79	84.698	Poecilia_mexicana
ENSSARG00000000842	SMARCA1	81	84.698	ENSPREG00000023250	smarca5	79	84.698	Poecilia_reticulata
ENSSARG00000000842	SMARCA1	92	88.257	ENSPPYG00000020703	SMARCA1	85	88.257	Pongo_abelii
ENSSARG00000000842	SMARCA1	58	96.356	ENSPCOG00000020722	SMARCA1	73	96.356	Propithecus_coquereli
ENSSARG00000000842	SMARCA1	86	94.194	ENSPVAG00000003805	SMARCA1	82	94.194	Pteropus_vampyrus
ENSSARG00000000842	SMARCA1	50	84.698	ENSPNYG00000012299	smarca5	77	84.698	Pundamilia_nyererei
ENSSARG00000000842	SMARCA1	92	87.706	ENSRNOG00000003762	Smarca1	85	87.706	Rattus_norvegicus
ENSSARG00000000842	SMARCA1	92	90.275	ENSRROG00000034167	SMARCA1	85	90.275	Rhinopithecus_roxellana
ENSSARG00000000842	SMARCA1	91	90.092	ENSSBOG00000020641	SMARCA1	83	97.163	Saimiri_boliviensis_boliviensis
ENSSARG00000000842	SMARCA1	83	82.979	ENSSHAG00000013518	SMARCA1	84	82.979	Sarcophilus_harrisii
ENSSARG00000000842	SMARCA1	81	83.274	ENSSFOG00015016794	smarca5	84	83.274	Scleropages_formosus
ENSSARG00000000842	SMARCA1	81	88.612	ENSSFOG00015009043	smarca1	80	88.612	Scleropages_formosus
ENSSARG00000000842	SMARCA1	81	83.630	ENSSMAG00000004801	smarca5	79	83.630	Scophthalmus_maximus
ENSSARG00000000842	SMARCA1	81	84.698	ENSSDUG00000020690	smarca5	79	84.698	Seriola_dumerili
ENSSARG00000000842	SMARCA1	81	84.698	ENSSLDG00000025190	smarca5	79	84.698	Seriola_lalandi_dorsalis
ENSSARG00000000842	SMARCA1	92	83.514	ENSSPUG00000000590	SMARCA1	88	83.514	Sphenodon_punctatus
ENSSARG00000000842	SMARCA1	81	84.342	ENSSPAG00000002894	smarca5	86	84.342	Stegastes_partitus
ENSSARG00000000842	SMARCA1	83	97.518	ENSSSCG00000012649	SMARCA1	79	97.518	Sus_scrofa
ENSSARG00000000842	SMARCA1	81	92.199	ENSTGUG00000003899	-	83	92.199	Taeniopygia_guttata
ENSSARG00000000842	SMARCA1	81	84.698	ENSTRUG00000014094	smarca5	78	84.698	Takifugu_rubripes
ENSSARG00000000842	SMARCA1	81	84.698	ENSTNIG00000017717	smarca5	78	84.698	Tetraodon_nigroviridis
ENSSARG00000000842	SMARCA1	92	92.371	ENSTBEG00000014973	SMARCA1	92	92.371	Tupaia_belangeri
ENSSARG00000000842	SMARCA1	91	88.991	ENSTTRG00000006168	SMARCA1	91	88.991	Tursiops_truncatus
ENSSARG00000000842	SMARCA1	92	88.257	ENSUAMG00000020201	SMARCA1	85	88.257	Ursus_americanus
ENSSARG00000000842	SMARCA1	87	97.163	ENSUMAG00000004073	SMARCA1	83	97.490	Ursus_maritimus
ENSSARG00000000842	SMARCA1	64	97.163	ENSVPAG00000010492	-	66	97.163	Vicugna_pacos
ENSSARG00000000842	SMARCA1	83	97.163	ENSVVUG00000008878	SMARCA1	85	97.163	Vulpes_vulpes
ENSSARG00000000842	SMARCA1	89	82.798	ENSXETG00000001526	smarca1	90	82.689	Xenopus_tropicalis
ENSSARG00000000842	SMARCA1	81	84.698	ENSXCOG00000011170	smarca5	81	84.698	Xiphophorus_couchianus
ENSSARG00000000842	SMARCA1	81	84.698	ENSXMAG00000009678	smarca5	87	84.698	Xiphophorus_maculatus