EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000001243 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 47893 bases
Position: chrGeneScaffold_1587:3552-51444
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000001135	La	PF05383.17	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000001240	-	1764	-	ENSSARP00000001135	587 (aa)	-	UPI0001580E68

Gene Model

Click here to download ENSSARG00000001243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000001243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000001243	-	79	97.170	ENSG00000107929	LARP4B	100	74.510	Homo_sapiens
ENSSARG00000001243	-	74	88.889	ENSAPOG00000020531	LARP4B	65	88.889	Acanthochromis_polyacanthus
ENSSARG00000001243	-	79	95.283	ENSAMEG00000001810	LARP4B	63	95.283	Ailuropoda_melanoleuca
ENSSARG00000001243	-	72	85.981	ENSAOCG00000007887	-	66	85.981	Amphiprion_ocellaris
ENSSARG00000001243	-	73	85.981	ENSAPEG00000002512	LARP4B	62	85.981	Amphiprion_percula
ENSSARG00000001243	-	79	84.112	ENSATEG00000012614	LARP4B	66	84.112	Anabas_testudineus
ENSSARG00000001243	-	79	90.654	ENSAPLG00000003813	LARP4B	62	90.654	Anas_platyrhynchos
ENSSARG00000001243	-	78	92.157	ENSACAG00000002858	LARP4B	64	92.157	Anolis_carolinensis
ENSSARG00000001243	-	79	97.170	ENSANAG00000007531	-	64	97.170	Aotus_nancymaae
ENSSARG00000001243	-	79	85.047	ENSACLG00000026356	LARP4B	72	85.047	Astatotilapia_calliptera
ENSSARG00000001243	-	68	82.474	ENSAMXG00000003335	larp4b	57	82.474	Astyanax_mexicanus
ENSSARG00000001243	-	79	97.170	ENSBTAG00000013899	LARP4B	65	97.170	Bos_taurus
ENSSARG00000001243	-	79	99.057	ENSCJAG00000018434	LARP4B	64	99.057	Callithrix_jacchus
ENSSARG00000001243	-	79	95.283	ENSCAFG00020004209	LARP4B	63	95.283	Canis_lupus_dingo
ENSSARG00000001243	-	79	98.113	ENSCHIG00000013543	LARP4B	64	98.113	Capra_hircus
ENSSARG00000001243	-	79	98.113	ENSTSYG00000002568	LARP4B	79	98.113	Carlito_syrichta
ENSSARG00000001243	-	79	96.226	ENSCAPG00000009725	LARP4B	64	96.226	Cavia_aperea
ENSSARG00000001243	-	79	96.226	ENSCPOG00000009375	LARP4B	64	96.226	Cavia_porcellus
ENSSARG00000001243	-	79	98.113	ENSCCAG00000024869	LARP4B	64	98.113	Cebus_capucinus
ENSSARG00000001243	-	79	97.170	ENSCATG00000019750	LARP4B	64	97.170	Cercocebus_atys
ENSSARG00000001243	-	79	98.113	ENSCLAG00000011570	LARP4B	65	98.113	Chinchilla_lanigera
ENSSARG00000001243	-	79	90.654	ENSCPBG00000017063	LARP4B	65	90.654	Chrysemys_picta_bellii
ENSSARG00000001243	-	79	97.170	ENSCANG00000038021	LARP4B	64	97.170	Colobus_angolensis_palliatus
ENSSARG00000001243	-	79	98.113	ENSCGRG00001022930	Larp4b	64	98.113	Cricetulus_griseus_chok1gshd
ENSSARG00000001243	-	79	98.113	ENSCGRG00000006022	Larp4b	64	98.113	Cricetulus_griseus_crigri
ENSSARG00000001243	-	79	85.981	ENSCSEG00000007342	LARP4B	69	85.981	Cynoglossus_semilaevis
ENSSARG00000001243	-	79	84.112	ENSCVAG00000008910	LARP4B	71	84.112	Cyprinodon_variegatus
ENSSARG00000001243	-	65	80.412	ENSDARG00000062146	larp4b	54	80.412	Danio_rerio
ENSSARG00000001243	-	79	97.196	ENSDORG00000009328	Larp4b	64	97.196	Dipodomys_ordii
ENSSARG00000001243	-	66	96.262	ENSETEG00000011249	LARP4B	55	96.262	Echinops_telfairi
ENSSARG00000001243	-	79	98.113	ENSEASG00005019068	-	63	98.113	Equus_asinus_asinus
ENSSARG00000001243	-	79	98.113	ENSECAG00000024040	LARP4B	63	98.113	Equus_caballus
ENSSARG00000001243	-	79	98.113	ENSEEUG00000008391	LARP4B	62	98.113	Erinaceus_europaeus
ENSSARG00000001243	-	79	82.243	ENSELUG00000008626	LARP4B	65	82.243	Esox_lucius
ENSSARG00000001243	-	79	97.170	ENSFCAG00000000721	-	63	97.170	Felis_catus
ENSSARG00000001243	-	79	90.654	ENSFALG00000006961	LARP4B	65	90.654	Ficedula_albicollis
ENSSARG00000001243	-	79	98.113	ENSFDAG00000006158	LARP4B	61	98.113	Fukomys_damarensis
ENSSARG00000001243	-	79	85.981	ENSFHEG00000013037	LARP4B	68	85.981	Fundulus_heteroclitus
ENSSARG00000001243	-	59	85.981	ENSGMOG00000010818	-	57	85.981	Gadus_morhua
ENSSARG00000001243	-	79	89.720	ENSGALG00000006672	LARP4B	65	89.720	Gallus_gallus
ENSSARG00000001243	-	79	85.981	ENSGACG00000017535	LARP4B	61	85.981	Gasterosteus_aculeatus
ENSSARG00000001243	-	79	90.654	ENSGAGG00000008598	LARP4B	69	90.654	Gopherus_agassizii
ENSSARG00000001243	-	79	97.170	ENSGGOG00000003572	LARP4B	64	97.170	Gorilla_gorilla
ENSSARG00000001243	-	79	85.047	ENSHBUG00000007535	LARP4B	71	85.047	Haplochromis_burtoni
ENSSARG00000001243	-	79	98.113	ENSHGLG00000012936	LARP4B	63	98.113	Heterocephalus_glaber_female
ENSSARG00000001243	-	79	98.113	ENSHGLG00100016220	-	64	98.113	Heterocephalus_glaber_male
ENSSARG00000001243	-	65	85.849	ENSHGLG00100017261	-	58	85.849	Heterocephalus_glaber_male
ENSSARG00000001243	-	78	87.379	ENSHCOG00000011581	LARP4B	62	87.379	Hippocampus_comes
ENSSARG00000001243	-	68	82.474	ENSIPUG00000009705	larp4b	57	82.474	Ictalurus_punctatus
ENSSARG00000001243	-	79	98.113	ENSSTOG00000000587	LARP4B	63	98.113	Ictidomys_tridecemlineatus
ENSSARG00000001243	-	79	98.095	ENSJJAG00000020847	Larp4b	63	98.095	Jaculus_jaculus
ENSSARG00000001243	-	79	85.047	ENSKMAG00000021674	LARP4B	71	85.047	Kryptolebias_marmoratus
ENSSARG00000001243	-	78	87.255	ENSLACG00000009492	LARP4B	68	87.255	Latimeria_chalumnae
ENSSARG00000001243	-	79	87.850	ENSLOCG00000012290	larp4b	69	87.850	Lepisosteus_oculatus
ENSSARG00000001243	-	79	97.170	ENSLAFG00000015334	LARP4B	68	97.170	Loxodonta_africana
ENSSARG00000001243	-	79	97.170	ENSMFAG00000001766	LARP4B	64	97.170	Macaca_fascicularis
ENSSARG00000001243	-	79	97.170	ENSMMUG00000005279	LARP4B	64	97.170	Macaca_mulatta
ENSSARG00000001243	-	79	97.170	ENSMNEG00000014019	LARP4B	64	97.170	Macaca_nemestrina
ENSSARG00000001243	-	79	97.170	ENSMLEG00000035198	LARP4B	64	97.170	Mandrillus_leucophaeus
ENSSARG00000001243	-	79	84.112	ENSMAMG00000013742	LARP4B	66	84.112	Mastacembelus_armatus
ENSSARG00000001243	-	79	85.047	ENSMZEG00005006498	-	70	85.047	Maylandia_zebra
ENSSARG00000001243	-	79	85.047	ENSMZEG00005014594	-	70	85.047	Maylandia_zebra
ENSSARG00000001243	-	79	89.720	ENSMGAG00000005472	LARP4B	63	89.720	Meleagris_gallopavo
ENSSARG00000001243	-	79	98.113	ENSMAUG00000021657	Larp4b	63	98.113	Mesocricetus_auratus
ENSSARG00000001243	-	79	95.283	ENSMICG00000001301	LARP4B	66	95.283	Microcebus_murinus
ENSSARG00000001243	-	66	98.113	ENSMOCG00000021452	Larp4b	59	98.113	Microtus_ochrogaster
ENSSARG00000001243	-	79	85.981	ENSMMOG00000011253	-	72	85.981	Mola_mola
ENSSARG00000001243	-	77	95.876	ENSMODG00000005957	LARP4B	65	95.876	Monodelphis_domestica
ENSSARG00000001243	-	73	83.333	ENSMALG00000012432	LARP4B	68	71.591	Monopterus_albus
ENSSARG00000001243	-	79	98.113	MGP_CAROLIEiJ_G0018216	Larp4b	64	98.113	Mus_caroli
ENSSARG00000001243	-	79	98.113	ENSMUSG00000033499	Larp4b	63	98.113	Mus_musculus
ENSSARG00000001243	-	79	98.113	MGP_PahariEiJ_G0019266	Larp4b	64	98.113	Mus_pahari
ENSSARG00000001243	-	79	98.113	MGP_SPRETEiJ_G0019074	Larp4b	63	98.113	Mus_spretus
ENSSARG00000001243	-	79	94.340	ENSMPUG00000016220	LARP4B	61	94.340	Mustela_putorius_furo
ENSSARG00000001243	-	79	96.226	ENSMLUG00000005880	LARP4B	68	96.226	Myotis_lucifugus
ENSSARG00000001243	-	79	97.170	ENSNGAG00000001750	Larp4b	64	97.170	Nannospalax_galili
ENSSARG00000001243	-	79	85.047	ENSNBRG00000020018	LARP4B	74	85.047	Neolamprologus_brichardi
ENSSARG00000001243	-	79	98.113	ENSNLEG00000013442	LARP4B	64	98.113	Nomascus_leucogenys
ENSSARG00000001243	-	74	81.250	ENSMEUG00000013114	-	60	81.250	Notamacropus_eugenii
ENSSARG00000001243	-	78	95.192	ENSOPRG00000003300	LARP4B	64	95.192	Ochotona_princeps
ENSSARG00000001243	-	73	93.333	ENSODEG00000001109	LARP4B	61	93.333	Octodon_degus
ENSSARG00000001243	-	79	85.047	ENSONIG00000017705	LARP4B	67	85.047	Oreochromis_niloticus
ENSSARG00000001243	-	79	90.741	ENSOANG00000006100	LARP4B	63	90.741	Ornithorhynchus_anatinus
ENSSARG00000001243	-	79	97.170	ENSOCUG00000004950	LARP4B	60	97.170	Oryctolagus_cuniculus
ENSSARG00000001243	-	77	86.735	ENSORLG00000006080	LARP4B	65	86.735	Oryzias_latipes
ENSSARG00000001243	-	77	87.755	ENSORLG00020020940	LARP4B	70	87.755	Oryzias_latipes_hni
ENSSARG00000001243	-	77	87.755	ENSORLG00015020608	LARP4B	70	87.755	Oryzias_latipes_hsok
ENSSARG00000001243	-	77	86.735	ENSOMEG00000019619	LARP4B	70	86.735	Oryzias_melastigma
ENSSARG00000001243	-	79	94.340	ENSOGAG00000011540	LARP4B	68	94.340	Otolemur_garnettii
ENSSARG00000001243	-	79	98.113	ENSOARG00000015320	LARP4B	62	98.113	Ovis_aries
ENSSARG00000001243	-	79	97.170	ENSPPAG00000039232	LARP4B	64	97.170	Pan_paniscus
ENSSARG00000001243	-	79	97.170	ENSPPRG00000009489	LARP4B	63	97.170	Panthera_pardus
ENSSARG00000001243	-	79	97.170	ENSPTIG00000008543	LARP4B	63	97.170	Panthera_tigris_altaica
ENSSARG00000001243	-	79	97.170	ENSPTRG00000002235	LARP4B	64	97.170	Pan_troglodytes
ENSSARG00000001243	-	79	97.170	ENSPANG00000023546	LARP4B	64	97.170	Papio_anubis
ENSSARG00000001243	-	78	82.243	ENSPKIG00000012368	LARP4B	64	82.243	Paramormyrops_kingsleyae
ENSSARG00000001243	-	79	98.113	ENSPEMG00000014052	Larp4b	64	98.113	Peromyscus_maniculatus_bairdii
ENSSARG00000001243	-	79	84.112	ENSPFOG00000000029	LARP4B	66	84.112	Poecilia_formosa
ENSSARG00000001243	-	79	84.112	ENSPLAG00000002871	LARP4B	67	83.962	Poecilia_latipinna
ENSSARG00000001243	-	79	84.112	ENSPMEG00000016361	LARP4B	71	84.112	Poecilia_mexicana
ENSSARG00000001243	-	79	98.113	ENSPPYG00000002035	LARP4B	62	98.113	Pongo_abelii
ENSSARG00000001243	-	79	96.226	ENSPCOG00000014688	LARP4B	64	96.226	Propithecus_coquereli
ENSSARG00000001243	-	79	80.609	ENSPVAG00000009784	LARP4B	66	80.609	Pteropus_vampyrus
ENSSARG00000001243	-	79	85.047	ENSPNYG00000024252	LARP4B	72	85.047	Pundamilia_nyererei
ENSSARG00000001243	-	65	81.443	ENSPNAG00000028956	larp4b	54	81.443	Pygocentrus_nattereri
ENSSARG00000001243	-	79	98.113	ENSRNOG00000015888	Larp4b	64	98.113	Rattus_norvegicus
ENSSARG00000001243	-	79	97.170	ENSRBIG00000033294	LARP4B	64	97.170	Rhinopithecus_bieti
ENSSARG00000001243	-	79	97.170	ENSRROG00000033879	LARP4B	64	97.170	Rhinopithecus_roxellana
ENSSARG00000001243	-	79	98.113	ENSSBOG00000021109	LARP4B	67	98.113	Saimiri_boliviensis_boliviensis
ENSSARG00000001243	-	79	89.524	ENSSHAG00000013392	LARP4B	65	89.524	Sarcophilus_harrisii
ENSSARG00000001243	-	66	87.255	ENSSFOG00015003256	LARP4B	59	87.255	Scleropages_formosus
ENSSARG00000001243	-	79	84.112	ENSSMAG00000005982	-	74	85.393	Scophthalmus_maximus
ENSSARG00000001243	-	79	85.047	ENSSDUG00000006704	LARP4B	72	85.047	Seriola_dumerili
ENSSARG00000001243	-	79	85.047	ENSSLDG00000020660	LARP4B	72	85.047	Seriola_lalandi_dorsalis
ENSSARG00000001243	-	77	90.816	ENSSPUG00000013734	-	72	90.816	Sphenodon_punctatus
ENSSARG00000001243	-	79	92.523	ENSSPUG00000002102	-	70	92.523	Sphenodon_punctatus
ENSSARG00000001243	-	79	85.981	ENSSPAG00000014628	LARP4B	68	85.981	Stegastes_partitus
ENSSARG00000001243	-	79	99.057	ENSSSCG00000011162	LARP4B	63	99.057	Sus_scrofa
ENSSARG00000001243	-	79	90.654	ENSTGUG00000000811	-	65	90.654	Taeniopygia_guttata
ENSSARG00000001243	-	79	83.019	ENSTNIG00000004571	-	64	80.734	Tetraodon_nigroviridis
ENSSARG00000001243	-	75	83.019	ENSTNIG00000007991	LARP4B	62	83.178	Tetraodon_nigroviridis
ENSSARG00000001243	-	67	97.170	ENSTTRG00000011151	LARP4B	54	97.170	Tursiops_truncatus
ENSSARG00000001243	-	64	95.283	ENSUAMG00000016461	LARP4B	55	95.283	Ursus_americanus
ENSSARG00000001243	-	79	95.283	ENSUMAG00000016127	LARP4B	63	95.283	Ursus_maritimus
ENSSARG00000001243	-	75	100.000	ENSVVUG00000008641	LARP4B	59	100.000	Vulpes_vulpes
ENSSARG00000001243	-	78	90.196	ENSXETG00000016882	larp4b	64	90.196	Xenopus_tropicalis
ENSSARG00000001243	-	77	88.421	ENSXCOG00000019952	LARP4B	64	88.421	Xiphophorus_couchianus
ENSSARG00000001243	-	77	87.755	ENSXMAG00000021533	LARP4B	69	87.755	Xiphophorus_maculatus