EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000001565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 2145 bases
Position: chrGeneScaffold_1284:457-2601
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000001412	RNA_pol_A_bac	PF01000.26	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000001554	-	465	-	ENSSARP00000001412	155 (aa)	-	UPI000157F931

Gene Model

Click here to download ENSSARG00000001565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000001565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000001565	-	100	67.949	ENSG00000102978	POLR2C	57	67.949	Homo_sapiens
ENSSARG00000001565	-	100	66.026	ENSAPOG00000011708	polr2c	57	66.026	Acanthochromis_polyacanthus
ENSSARG00000001565	-	100	68.590	ENSAMEG00000017026	POLR2C	57	68.590	Ailuropoda_melanoleuca
ENSSARG00000001565	-	100	65.385	ENSACIG00000012060	polr2c	57	65.385	Amphilophus_citrinellus
ENSSARG00000001565	-	100	66.026	ENSAOCG00000015665	polr2c	57	66.026	Amphiprion_ocellaris
ENSSARG00000001565	-	100	66.026	ENSAOCG00000018000	-	59	66.026	Amphiprion_ocellaris
ENSSARG00000001565	-	100	66.026	ENSAOCG00000010477	-	57	66.026	Amphiprion_ocellaris
ENSSARG00000001565	-	100	66.026	ENSAPEG00000007221	polr2c	57	66.026	Amphiprion_percula
ENSSARG00000001565	-	100	65.385	ENSATEG00000007143	polr2c	57	65.385	Anabas_testudineus
ENSSARG00000001565	-	100	66.667	ENSAPLG00000005385	POLR2C	57	66.667	Anas_platyrhynchos
ENSSARG00000001565	-	98	53.595	ENSACAG00000011302	-	70	53.595	Anolis_carolinensis
ENSSARG00000001565	-	100	67.308	ENSACAG00000007514	-	57	67.308	Anolis_carolinensis
ENSSARG00000001565	-	100	67.949	ENSANAG00000005302	POLR2C	57	67.949	Aotus_nancymaae
ENSSARG00000001565	-	100	65.385	ENSACLG00000004854	polr2c	66	65.385	Astatotilapia_calliptera
ENSSARG00000001565	-	100	66.026	ENSAMXG00000012805	polr2c	57	66.026	Astyanax_mexicanus
ENSSARG00000001565	-	100	68.590	ENSBTAG00000001856	POLR2C	57	68.590	Bos_taurus
ENSSARG00000001565	-	100	49.383	WBGene00007971	rpb-3	57	49.383	Caenorhabditis_elegans
ENSSARG00000001565	-	100	67.949	ENSCJAG00000012016	POLR2C	57	67.949	Callithrix_jacchus
ENSSARG00000001565	-	100	68.590	ENSCAFG00000008720	POLR2C	57	68.590	Canis_familiaris
ENSSARG00000001565	-	100	68.590	ENSCAFG00020007660	POLR2C	57	68.590	Canis_lupus_dingo
ENSSARG00000001565	-	100	68.590	ENSCHIG00000012072	POLR2C	57	68.590	Capra_hircus
ENSSARG00000001565	-	100	67.308	ENSTSYG00000011076	POLR2C	57	67.308	Carlito_syrichta
ENSSARG00000001565	-	100	68.590	ENSCPOG00000004554	POLR2C	57	68.590	Cavia_porcellus
ENSSARG00000001565	-	100	67.949	ENSCCAG00000035768	POLR2C	57	67.949	Cebus_capucinus
ENSSARG00000001565	-	100	67.949	ENSCATG00000040803	POLR2C	57	67.949	Cercocebus_atys
ENSSARG00000001565	-	100	68.590	ENSCLAG00000013676	POLR2C	57	68.590	Chinchilla_lanigera
ENSSARG00000001565	-	100	67.949	ENSCSAG00000004901	POLR2C	57	67.949	Chlorocebus_sabaeus
ENSSARG00000001565	-	100	62.821	ENSCHOG00000002986	POLR2C	58	62.821	Choloepus_hoffmanni
ENSSARG00000001565	-	100	67.949	ENSCPBG00000022758	POLR2C	59	67.949	Chrysemys_picta_bellii
ENSSARG00000001565	-	100	49.367	ENSCING00000021895	-	55	49.367	Ciona_intestinalis
ENSSARG00000001565	-	100	51.282	ENSCSAVG00000002167	-	56	51.282	Ciona_savignyi
ENSSARG00000001565	-	100	67.949	ENSCANG00000034876	POLR2C	57	67.949	Colobus_angolensis_palliatus
ENSSARG00000001565	-	100	68.590	ENSCGRG00001019477	Polr2c	57	68.590	Cricetulus_griseus_chok1gshd
ENSSARG00000001565	-	100	68.590	ENSCGRG00000013273	Polr2c	57	68.590	Cricetulus_griseus_crigri
ENSSARG00000001565	-	100	66.026	ENSCSEG00000001719	polr2c	57	66.026	Cynoglossus_semilaevis
ENSSARG00000001565	-	100	65.385	ENSCVAG00000017931	polr2c	63	65.385	Cyprinodon_variegatus
ENSSARG00000001565	-	100	65.385	ENSCVAG00000004718	-	57	65.385	Cyprinodon_variegatus
ENSSARG00000001565	-	100	64.103	ENSDARG00000033596	polr2c	57	64.103	Danio_rerio
ENSSARG00000001565	-	100	42.581	ENSDNOG00000036028	-	62	42.581	Dasypus_novemcinctus
ENSSARG00000001565	-	100	68.590	ENSDORG00000000081	Polr2c	57	68.590	Dipodomys_ordii
ENSSARG00000001565	-	100	51.592	FBgn0026373	RpII33	57	51.592	Drosophila_melanogaster
ENSSARG00000001565	-	97	60.927	ENSEBUG00000016262	polr2c	60	60.927	Eptatretus_burgeri
ENSSARG00000001565	-	100	68.590	ENSEASG00005005406	POLR2C	57	68.590	Equus_asinus_asinus
ENSSARG00000001565	-	100	68.590	ENSECAG00000015818	POLR2C	57	68.590	Equus_caballus
ENSSARG00000001565	-	100	64.103	ENSELUG00000012259	polr2c	61	64.103	Esox_lucius
ENSSARG00000001565	-	100	68.590	ENSFCAG00000034622	POLR2C	57	68.590	Felis_catus
ENSSARG00000001565	-	100	67.308	ENSFALG00000006931	POLR2C	57	67.308	Ficedula_albicollis
ENSSARG00000001565	-	100	68.590	ENSFDAG00000008641	POLR2C	59	68.590	Fukomys_damarensis
ENSSARG00000001565	-	100	65.385	ENSFHEG00000020739	polr2c	57	65.385	Fundulus_heteroclitus
ENSSARG00000001565	-	100	64.103	ENSGMOG00000004203	polr2c	57	64.103	Gadus_morhua
ENSSARG00000001565	-	100	66.667	ENSGALG00000001168	POLR2C	57	66.667	Gallus_gallus
ENSSARG00000001565	-	100	65.385	ENSGAFG00000021951	polr2c	57	65.385	Gambusia_affinis
ENSSARG00000001565	-	100	64.103	ENSGACG00000002194	polr2c	57	64.103	Gasterosteus_aculeatus
ENSSARG00000001565	-	100	67.949	ENSGAGG00000016942	POLR2C	56	67.949	Gopherus_agassizii
ENSSARG00000001565	-	100	67.949	ENSGGOG00000012415	POLR2C	57	67.949	Gorilla_gorilla
ENSSARG00000001565	-	100	65.385	ENSHBUG00000023040	polr2c	66	65.385	Haplochromis_burtoni
ENSSARG00000001565	-	100	68.590	ENSHGLG00000013465	POLR2C	57	68.590	Heterocephalus_glaber_female
ENSSARG00000001565	-	100	68.590	ENSHGLG00100011949	POLR2C	57	68.590	Heterocephalus_glaber_male
ENSSARG00000001565	-	100	62.821	ENSHCOG00000007066	polr2c	57	62.821	Hippocampus_comes
ENSSARG00000001565	-	100	65.385	ENSIPUG00000009231	polr2c	57	65.385	Ictalurus_punctatus
ENSSARG00000001565	-	100	62.821	ENSSTOG00000031354	-	57	62.821	Ictidomys_tridecemlineatus
ENSSARG00000001565	-	100	68.590	ENSSTOG00000015150	-	57	68.590	Ictidomys_tridecemlineatus
ENSSARG00000001565	-	100	68.590	ENSJJAG00000023057	Polr2c	57	68.590	Jaculus_jaculus
ENSSARG00000001565	-	100	65.385	ENSKMAG00000016196	polr2c	57	65.385	Kryptolebias_marmoratus
ENSSARG00000001565	-	100	64.103	ENSLBEG00000007369	polr2c	57	64.103	Labrus_bergylta
ENSSARG00000001565	-	100	64.744	ENSLOCG00000003215	polr2c	57	64.744	Lepisosteus_oculatus
ENSSARG00000001565	-	100	67.949	ENSLAFG00000027230	POLR2C	58	67.949	Loxodonta_africana
ENSSARG00000001565	-	100	67.949	ENSMFAG00000016861	POLR2C	57	67.949	Macaca_fascicularis
ENSSARG00000001565	-	100	67.949	ENSMMUG00000020474	POLR2C	57	67.949	Macaca_mulatta
ENSSARG00000001565	-	100	67.949	ENSMNEG00000033565	POLR2C	57	67.949	Macaca_nemestrina
ENSSARG00000001565	-	100	67.949	ENSMLEG00000032412	POLR2C	57	67.949	Mandrillus_leucophaeus
ENSSARG00000001565	-	100	65.385	ENSMAMG00000013205	polr2c	57	65.385	Mastacembelus_armatus
ENSSARG00000001565	-	100	65.385	ENSMZEG00005015329	polr2c	57	65.385	Maylandia_zebra
ENSSARG00000001565	-	95	63.758	ENSMAUG00000019031	-	58	63.758	Mesocricetus_auratus
ENSSARG00000001565	-	100	52.258	ENSMAUG00000000779	-	52	52.258	Mesocricetus_auratus
ENSSARG00000001565	-	100	67.949	ENSMICG00000045178	POLR2C	57	67.949	Microcebus_murinus
ENSSARG00000001565	-	100	67.949	ENSMOCG00000013652	Polr2c	57	67.949	Microtus_ochrogaster
ENSSARG00000001565	-	100	64.744	ENSMMOG00000010560	polr2c	57	64.744	Mola_mola
ENSSARG00000001565	-	100	67.949	ENSMODG00000013540	POLR2C	57	67.949	Monodelphis_domestica
ENSSARG00000001565	-	100	65.385	ENSMALG00000004581	polr2c	57	65.385	Monopterus_albus
ENSSARG00000001565	-	100	68.590	MGP_CAROLIEiJ_G0031409	Polr2c	57	68.590	Mus_caroli
ENSSARG00000001565	-	100	68.590	ENSMUSG00000031783	Polr2c	57	93.151	Mus_musculus
ENSSARG00000001565	-	100	68.590	MGP_PahariEiJ_G0023007	Polr2c	57	68.590	Mus_pahari
ENSSARG00000001565	-	100	68.590	MGP_SPRETEiJ_G0032528	Polr2c	57	68.590	Mus_spretus
ENSSARG00000001565	-	100	68.590	ENSMPUG00000004483	POLR2C	57	68.590	Mustela_putorius_furo
ENSSARG00000001565	-	100	68.590	ENSMLUG00000015833	-	57	68.590	Myotis_lucifugus
ENSSARG00000001565	-	100	68.590	ENSMLUG00000025422	-	57	68.590	Myotis_lucifugus
ENSSARG00000001565	-	100	67.308	ENSMLUG00000029495	-	57	67.308	Myotis_lucifugus
ENSSARG00000001565	-	100	59.615	ENSNGAG00000010540	-	59	59.615	Nannospalax_galili
ENSSARG00000001565	-	100	68.590	ENSNGAG00000012249	-	58	68.590	Nannospalax_galili
ENSSARG00000001565	-	93	61.379	ENSNLEG00000003034	POLR2C	58	61.379	Nomascus_leucogenys
ENSSARG00000001565	-	100	55.769	ENSMEUG00000014741	POLR2C	57	55.769	Notamacropus_eugenii
ENSSARG00000001565	-	100	76.282	ENSOPRG00000006979	POLR2C	57	76.282	Ochotona_princeps
ENSSARG00000001565	-	100	68.590	ENSODEG00000016934	POLR2C	57	68.590	Octodon_degus
ENSSARG00000001565	-	100	65.385	ENSONIG00000010914	polr2c	57	65.385	Oreochromis_niloticus
ENSSARG00000001565	-	100	67.308	ENSOANG00000009337	POLR2C	68	67.308	Ornithorhynchus_anatinus
ENSSARG00000001565	-	100	67.949	ENSOCUG00000014984	POLR2C	57	67.949	Oryctolagus_cuniculus
ENSSARG00000001565	-	100	65.385	ENSORLG00000015108	polr2c	57	65.385	Oryzias_latipes
ENSSARG00000001565	-	100	65.385	ENSORLG00020013566	polr2c	57	65.385	Oryzias_latipes_hni
ENSSARG00000001565	-	100	65.385	ENSORLG00015003751	polr2c	57	65.385	Oryzias_latipes_hsok
ENSSARG00000001565	-	100	65.385	ENSOMEG00000019444	polr2c	57	65.385	Oryzias_melastigma
ENSSARG00000001565	-	100	34.615	ENSOGAG00000029610	-	59	34.615	Otolemur_garnettii
ENSSARG00000001565	-	100	67.308	ENSOGAG00000016866	POLR2C	57	67.308	Otolemur_garnettii
ENSSARG00000001565	-	100	68.590	ENSOARG00000000302	POLR2C	57	68.590	Ovis_aries
ENSSARG00000001565	-	100	67.949	ENSPPAG00000042822	POLR2C	61	67.949	Pan_paniscus
ENSSARG00000001565	-	100	68.590	ENSPPRG00000003215	POLR2C	57	68.590	Panthera_pardus
ENSSARG00000001565	-	100	68.590	ENSPTIG00000010297	POLR2C	57	68.590	Panthera_tigris_altaica
ENSSARG00000001565	-	100	67.949	ENSPTRG00000008157	POLR2C	57	67.949	Pan_troglodytes
ENSSARG00000001565	-	100	67.949	ENSPANG00000006264	POLR2C	57	67.949	Papio_anubis
ENSSARG00000001565	-	100	65.385	ENSPKIG00000005228	polr2c	57	65.385	Paramormyrops_kingsleyae
ENSSARG00000001565	-	100	67.949	ENSPSIG00000016112	POLR2C	57	67.949	Pelodiscus_sinensis
ENSSARG00000001565	-	100	65.385	ENSPMGG00000021249	polr2c	64	65.385	Periophthalmus_magnuspinnatus
ENSSARG00000001565	-	100	68.590	ENSPEMG00000014204	Polr2c	57	68.590	Peromyscus_maniculatus_bairdii
ENSSARG00000001565	-	100	62.179	ENSPMAG00000004827	polr2c	68	62.179	Petromyzon_marinus
ENSSARG00000001565	-	100	67.949	ENSPCIG00000015111	POLR2C	57	67.949	Phascolarctos_cinereus
ENSSARG00000001565	-	100	65.385	ENSPFOG00000024666	polr2c	57	65.385	Poecilia_formosa
ENSSARG00000001565	-	100	65.385	ENSPLAG00000019750	polr2c	57	65.385	Poecilia_latipinna
ENSSARG00000001565	-	100	65.385	ENSPMEG00000001741	polr2c	57	65.385	Poecilia_mexicana
ENSSARG00000001565	-	100	65.385	ENSPREG00000003090	polr2c	57	65.385	Poecilia_reticulata
ENSSARG00000001565	-	100	67.949	ENSPPYG00000007390	POLR2C	57	67.949	Pongo_abelii
ENSSARG00000001565	-	100	67.949	ENSPCAG00000002423	POLR2C	68	67.949	Procavia_capensis
ENSSARG00000001565	-	100	67.949	ENSPCOG00000017282	POLR2C	57	67.949	Propithecus_coquereli
ENSSARG00000001565	-	100	68.590	ENSPVAG00000001399	POLR2C	57	68.590	Pteropus_vampyrus
ENSSARG00000001565	-	100	65.385	ENSPNYG00000003756	polr2c	57	65.385	Pundamilia_nyererei
ENSSARG00000001565	-	100	65.385	ENSPNAG00000012133	polr2c	57	65.385	Pygocentrus_nattereri
ENSSARG00000001565	-	100	68.590	ENSRNOG00000015720	Polr2c	57	68.590	Rattus_norvegicus
ENSSARG00000001565	-	100	67.949	ENSRBIG00000026549	POLR2C	57	67.949	Rhinopithecus_bieti
ENSSARG00000001565	-	100	67.949	ENSRROG00000045745	POLR2C	57	67.949	Rhinopithecus_roxellana
ENSSARG00000001565	-	100	67.949	ENSSBOG00000030004	POLR2C	57	67.949	Saimiri_boliviensis_boliviensis
ENSSARG00000001565	-	100	64.103	ENSSFOG00015023460	polr2c	57	64.103	Scleropages_formosus
ENSSARG00000001565	-	100	65.385	ENSSDUG00000003354	polr2c	57	65.385	Seriola_dumerili
ENSSARG00000001565	-	100	65.385	ENSSLDG00000003555	polr2c	57	65.385	Seriola_lalandi_dorsalis
ENSSARG00000001565	-	100	66.667	ENSSPUG00000012934	POLR2C	57	66.667	Sphenodon_punctatus
ENSSARG00000001565	-	100	66.026	ENSSPAG00000005108	polr2c	58	66.026	Stegastes_partitus
ENSSARG00000001565	-	100	68.590	ENSSSCG00000025454	POLR2C	57	68.590	Sus_scrofa
ENSSARG00000001565	-	100	67.308	ENSTGUG00000004996	POLR2C	57	67.308	Taeniopygia_guttata
ENSSARG00000001565	-	100	65.385	ENSTRUG00000004676	polr2c	57	65.385	Takifugu_rubripes
ENSSARG00000001565	-	100	64.744	ENSTNIG00000008851	polr2c	57	64.744	Tetraodon_nigroviridis
ENSSARG00000001565	-	100	66.667	ENSTBEG00000009442	POLR2C	57	66.667	Tupaia_belangeri
ENSSARG00000001565	-	100	67.949	ENSTTRG00000010060	POLR2C	68	67.949	Tursiops_truncatus
ENSSARG00000001565	-	100	68.590	ENSUAMG00000014170	POLR2C	57	68.590	Ursus_americanus
ENSSARG00000001565	-	100	68.590	ENSUMAG00000021686	POLR2C	60	68.590	Ursus_maritimus
ENSSARG00000001565	-	100	59.236	ENSVPAG00000007590	POLR2C	85	59.236	Vicugna_pacos
ENSSARG00000001565	-	100	62.581	ENSVVUG00000023516	-	54	62.581	Vulpes_vulpes
ENSSARG00000001565	-	100	67.308	ENSXETG00000013784	polr2c	57	67.308	Xenopus_tropicalis
ENSSARG00000001565	-	100	65.385	ENSXCOG00000020734	polr2c	57	65.385	Xiphophorus_couchianus
ENSSARG00000001565	-	100	65.385	ENSXMAG00000015984	polr2c	57	65.385	Xiphophorus_maculatus