EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000001735 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 5835 bases
Position: chrGeneScaffold_4952:1929-7763
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000001596	RRM_1	PF00076.22	3.6e-38	1	3
ENSSARP00000001596	RRM_1	PF00076.22	3.6e-38	2	3
ENSSARP00000001596	RRM_1	PF00076.22	3.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000001756	RBM47-201	1791	-	ENSSARP00000001596	596 (aa)	-	UPI000158028C

Gene Model

Click here to download ENSSARG00000001735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000001735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000001735	RBM47	67	50.721	ENSSARG00000005940	A1CF	69	50.721
ENSSARG00000001735	RBM47	52	55.591	ENSSARG00000001732	HNRNPR	72	45.969
ENSSARG00000001735	RBM47	50	74.667	ENSSARG00000006520	RBM46	56	74.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000001735	RBM47	75	95.759	ENSG00000163694	RBM47	100	98.618	Homo_sapiens
ENSSARG00000001735	RBM47	75	81.960	ENSAPOG00000011062	rbm47	84	79.733	Acanthochromis_polyacanthus
ENSSARG00000001735	RBM47	84	96.205	ENSAMEG00000009672	RBM47	84	96.205	Ailuropoda_melanoleuca
ENSSARG00000001735	RBM47	75	82.183	ENSACIG00000011531	rbm47	85	79.955	Amphilophus_citrinellus
ENSSARG00000001735	RBM47	75	82.183	ENSAOCG00000022245	rbm47	85	79.955	Amphiprion_ocellaris
ENSSARG00000001735	RBM47	75	82.183	ENSAPEG00000018304	rbm47	85	79.955	Amphiprion_percula
ENSSARG00000001735	RBM47	84	80.130	ENSATEG00000018400	rbm47	85	77.754	Anabas_testudineus
ENSSARG00000001735	RBM47	84	91.741	ENSAPLG00000013974	RBM47	84	91.518	Anas_platyrhynchos
ENSSARG00000001735	RBM47	75	85.778	ENSACAG00000011833	RBM47	84	85.778	Anolis_carolinensis
ENSSARG00000001735	RBM47	75	95.078	ENSANAG00000029440	RBM47	95	93.931	Aotus_nancymaae
ENSSARG00000001735	RBM47	75	80.260	ENSACLG00000016902	rbm47	85	78.091	Astatotilapia_calliptera
ENSSARG00000001735	RBM47	81	78.696	ENSAMXG00000021794	rbm47	85	78.261	Astyanax_mexicanus
ENSSARG00000001735	RBM47	75	96.205	ENSBTAG00000002356	RBM47	85	96.205	Bos_taurus
ENSSARG00000001735	RBM47	75	94.855	ENSCJAG00000019385	RBM47	95	93.668	Callithrix_jacchus
ENSSARG00000001735	RBM47	71	94.601	ENSCAFG00000015898	RBM47	85	93.333	Canis_familiaris
ENSSARG00000001735	RBM47	71	94.601	ENSCAFG00020010558	RBM47	80	92.651	Canis_lupus_dingo
ENSSARG00000001735	RBM47	75	96.429	ENSCHIG00000026214	RBM47	85	96.429	Capra_hircus
ENSSARG00000001735	RBM47	62	92.647	ENSTSYG00000033612	RBM47	72	92.647	Carlito_syrichta
ENSSARG00000001735	RBM47	84	87.054	ENSCAPG00000008426	RBM47	85	87.719	Cavia_aperea
ENSSARG00000001735	RBM47	84	95.759	ENSCPOG00000014100	RBM47	85	95.759	Cavia_porcellus
ENSSARG00000001735	RBM47	75	62.737	ENSCCAG00000024397	-	90	60.504	Cebus_capucinus
ENSSARG00000001735	RBM47	75	95.302	ENSCCAG00000030129	-	95	93.931	Cebus_capucinus
ENSSARG00000001735	RBM47	75	95.759	ENSCATG00000042064	RBM47	95	95.251	Cercocebus_atys
ENSSARG00000001735	RBM47	84	95.973	ENSCLAG00000001684	RBM47	100	96.203	Chinchilla_lanigera
ENSSARG00000001735	RBM47	75	95.759	ENSCSAG00000017060	RBM47	84	95.759	Chlorocebus_sabaeus
ENSSARG00000001735	RBM47	84	87.277	ENSCHOG00000011731	RBM47	84	87.500	Choloepus_hoffmanni
ENSSARG00000001735	RBM47	75	91.499	ENSCPBG00000013831	RBM47	85	91.499	Chrysemys_picta_bellii
ENSSARG00000001735	RBM47	75	95.759	ENSCANG00000019997	RBM47	95	94.987	Colobus_angolensis_palliatus
ENSSARG00000001735	RBM47	73	87.927	ENSCGRG00001020102	-	82	87.402	Cricetulus_griseus_chok1gshd
ENSSARG00000001735	RBM47	84	92.841	ENSCGRG00001000623	-	84	92.394	Cricetulus_griseus_chok1gshd
ENSSARG00000001735	RBM47	73	87.402	ENSCGRG00000014760	-	82	86.877	Cricetulus_griseus_crigri
ENSSARG00000001735	RBM47	84	91.723	ENSCGRG00000007762	-	100	93.671	Cricetulus_griseus_crigri
ENSSARG00000001735	RBM47	75	80.266	ENSCSEG00000004545	rbm47	85	78.271	Cynoglossus_semilaevis
ENSSARG00000001735	RBM47	75	80.531	ENSCVAG00000020144	rbm47	75	79.601	Cyprinodon_variegatus
ENSSARG00000001735	RBM47	84	78.478	ENSDARG00000061985	rbm47	85	78.043	Danio_rerio
ENSSARG00000001735	RBM47	84	95.536	ENSDNOG00000046854	RBM47	85	94.420	Dasypus_novemcinctus
ENSSARG00000001735	RBM47	75	95.749	ENSDORG00000010144	Rbm47	84	95.536	Dipodomys_ordii
ENSSARG00000001735	RBM47	81	96.729	ENSETEG00000009194	RBM47	84	95.302	Echinops_telfairi
ENSSARG00000001735	RBM47	75	66.816	ENSEBUG00000011912	rbm47	80	67.713	Eptatretus_burgeri
ENSSARG00000001735	RBM47	75	96.205	ENSEASG00005008443	RBM47	85	96.205	Equus_asinus_asinus
ENSSARG00000001735	RBM47	75	96.205	ENSECAG00000004400	RBM47	85	96.205	Equus_caballus
ENSSARG00000001735	RBM47	59	96.970	ENSEEUG00000001194	RBM47	60	96.970	Erinaceus_europaeus
ENSSARG00000001735	RBM47	75	81.514	ENSELUG00000006148	rbm47	83	80.624	Esox_lucius
ENSSARG00000001735	RBM47	75	95.759	ENSFCAG00000012399	RBM47	85	95.759	Felis_catus
ENSSARG00000001735	RBM47	75	91.051	ENSFALG00000002861	RBM47	84	90.828	Ficedula_albicollis
ENSSARG00000001735	RBM47	84	93.527	ENSFDAG00000016326	RBM47	85	92.188	Fukomys_damarensis
ENSSARG00000001735	RBM47	84	81.375	ENSFHEG00000007938	rbm47	86	78.571	Fundulus_heteroclitus
ENSSARG00000001735	RBM47	84	78.205	ENSGMOG00000014802	rbm47	75	76.709	Gadus_morhua
ENSSARG00000001735	RBM47	64	89.974	ENSGALG00000014267	RBM47	99	89.710	Gallus_gallus
ENSSARG00000001735	RBM47	64	82.199	ENSGAFG00000020571	rbm47	98	78.796	Gambusia_affinis
ENSSARG00000001735	RBM47	75	78.587	ENSGACG00000016223	rbm47	85	76.660	Gasterosteus_aculeatus
ENSSARG00000001735	RBM47	75	91.723	ENSGAGG00000020051	RBM47	85	91.723	Gopherus_agassizii
ENSSARG00000001735	RBM47	75	95.759	ENSGGOG00000001367	RBM47	95	95.251	Gorilla_gorilla
ENSSARG00000001735	RBM47	75	80.260	ENSHBUG00000003520	rbm47	84	78.091	Haplochromis_burtoni
ENSSARG00000001735	RBM47	73	81.818	ENSHGLG00000016914	RBM47	100	94.304	Heterocephalus_glaber_female
ENSSARG00000001735	RBM47	80	86.607	ENSHGLG00100003071	-	83	85.714	Heterocephalus_glaber_male
ENSSARG00000001735	RBM47	84	93.750	ENSHGLG00100014028	-	100	94.304	Heterocephalus_glaber_male
ENSSARG00000001735	RBM47	75	81.818	ENSHCOG00000002074	rbm47	85	79.601	Hippocampus_comes
ENSSARG00000001735	RBM47	75	79.911	ENSIPUG00000004743	rbm47	85	78.795	Ictalurus_punctatus
ENSSARG00000001735	RBM47	75	94.196	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSSARG00000001735	RBM47	84	92.889	ENSJJAG00000013823	Rbm47	84	93.111	Jaculus_jaculus
ENSSARG00000001735	RBM47	75	82.262	ENSKMAG00000000084	rbm47	85	79.823	Kryptolebias_marmoratus
ENSSARG00000001735	RBM47	75	79.646	ENSLBEG00000008436	rbm47	85	77.876	Labrus_bergylta
ENSSARG00000001735	RBM47	84	87.500	ENSLACG00000007196	RBM47	85	87.277	Latimeria_chalumnae
ENSSARG00000001735	RBM47	84	86.192	ENSLOCG00000012966	rbm47	82	84.633	Lepisosteus_oculatus
ENSSARG00000001735	RBM47	84	93.736	ENSLAFG00000011998	RBM47	86	92.617	Loxodonta_africana
ENSSARG00000001735	RBM47	75	95.759	ENSMFAG00000037967	RBM47	95	95.251	Macaca_fascicularis
ENSSARG00000001735	RBM47	75	95.759	ENSMMUG00000012036	RBM47	100	98.446	Macaca_mulatta
ENSSARG00000001735	RBM47	75	95.536	ENSMNEG00000040774	RBM47	95	95.515	Macaca_nemestrina
ENSSARG00000001735	RBM47	75	98.095	ENSMLEG00000041432	RBM47	97	98.095	Mandrillus_leucophaeus
ENSSARG00000001735	RBM47	84	80.087	ENSMAMG00000019143	rbm47	85	77.706	Mastacembelus_armatus
ENSSARG00000001735	RBM47	75	80.260	ENSMZEG00005023659	rbm47	85	78.091	Maylandia_zebra
ENSSARG00000001735	RBM47	75	91.051	ENSMGAG00000012226	RBM47	84	90.828	Meleagris_gallopavo
ENSSARG00000001735	RBM47	75	93.065	ENSMAUG00000006493	Rbm47	100	93.671	Mesocricetus_auratus
ENSSARG00000001735	RBM47	75	89.732	ENSMICG00000026417	RBM47	86	90.625	Microcebus_murinus
ENSSARG00000001735	RBM47	75	93.512	ENSMOCG00000021170	Rbm47	100	94.304	Microtus_ochrogaster
ENSSARG00000001735	RBM47	84	80.000	ENSMMOG00000007260	rbm47	85	77.706	Mola_mola
ENSSARG00000001735	RBM47	84	91.759	ENSMODG00000007003	RBM47	84	91.518	Monodelphis_domestica
ENSSARG00000001735	RBM47	84	83.259	ENSMODG00000020561	-	85	83.036	Monodelphis_domestica
ENSSARG00000001735	RBM47	52	81.529	ENSMODG00000015426	-	98	78.981	Monodelphis_domestica
ENSSARG00000001735	RBM47	75	80.752	ENSMALG00000005167	rbm47	85	79.733	Monopterus_albus
ENSSARG00000001735	RBM47	75	92.857	MGP_CAROLIEiJ_G0027258	Rbm47	100	92.405	Mus_caroli
ENSSARG00000001735	RBM47	75	93.080	ENSMUSG00000070780	Rbm47	100	92.405	Mus_musculus
ENSSARG00000001735	RBM47	75	93.080	MGP_PahariEiJ_G0017040	Rbm47	100	93.038	Mus_pahari
ENSSARG00000001735	RBM47	75	93.080	MGP_SPRETEiJ_G0028253	Rbm47	100	92.405	Mus_spretus
ENSSARG00000001735	RBM47	84	96.429	ENSMPUG00000006177	RBM47	79	96.429	Mustela_putorius_furo
ENSSARG00000001735	RBM47	84	92.617	ENSMLUG00000000889	RBM47	85	92.617	Myotis_lucifugus
ENSSARG00000001735	RBM47	84	93.080	ENSNGAG00000003325	Rbm47	84	92.857	Nannospalax_galili
ENSSARG00000001735	RBM47	75	80.477	ENSNBRG00000015092	rbm47	84	78.308	Neolamprologus_brichardi
ENSSARG00000001735	RBM47	75	95.759	ENSNLEG00000017151	RBM47	95	95.251	Nomascus_leucogenys
ENSSARG00000001735	RBM47	72	86.079	ENSMEUG00000009516	-	99	86.079	Notamacropus_eugenii
ENSSARG00000001735	RBM47	60	93.878	ENSOPRG00000016507	-	60	92.653	Ochotona_princeps
ENSSARG00000001735	RBM47	84	94.196	ENSODEG00000004873	RBM47	85	93.973	Octodon_degus
ENSSARG00000001735	RBM47	75	79.140	ENSONIG00000009061	rbm47	85	76.940	Oreochromis_niloticus
ENSSARG00000001735	RBM47	75	88.742	ENSOANG00000008978	RBM47	86	88.742	Ornithorhynchus_anatinus
ENSSARG00000001735	RBM47	75	95.768	ENSOCUG00000012034	RBM47	85	95.768	Oryctolagus_cuniculus
ENSSARG00000001735	RBM47	75	81.960	ENSORLG00000005847	rbm47	85	79.287	Oryzias_latipes
ENSSARG00000001735	RBM47	75	81.960	ENSORLG00020005154	rbm47	85	79.287	Oryzias_latipes_hni
ENSSARG00000001735	RBM47	75	82.183	ENSORLG00015000066	rbm47	85	79.733	Oryzias_latipes_hsok
ENSSARG00000001735	RBM47	84	82.183	ENSOMEG00000010730	rbm47	75	79.733	Oryzias_melastigma
ENSSARG00000001735	RBM47	84	87.946	ENSOGAG00000025193	-	85	87.054	Otolemur_garnettii
ENSSARG00000001735	RBM47	75	96.429	ENSOGAG00000029367	-	84	96.429	Otolemur_garnettii
ENSSARG00000001735	RBM47	84	85.938	ENSOARG00000012711	RBM47	83	85.455	Ovis_aries
ENSSARG00000001735	RBM47	75	95.759	ENSPPAG00000029763	RBM47	95	95.251	Pan_paniscus
ENSSARG00000001735	RBM47	84	95.982	ENSPPRG00000012873	RBM47	88	95.982	Panthera_pardus
ENSSARG00000001735	RBM47	69	95.822	ENSPTIG00000017046	RBM47	84	95.822	Panthera_tigris_altaica
ENSSARG00000001735	RBM47	75	95.759	ENSPTRG00000016006	RBM47	95	95.251	Pan_troglodytes
ENSSARG00000001735	RBM47	75	95.759	ENSPANG00000005980	RBM47	95	95.251	Papio_anubis
ENSSARG00000001735	RBM47	80	81.524	ENSPKIG00000013431	RBM47	91	77.162	Paramormyrops_kingsleyae
ENSSARG00000001735	RBM47	81	82.904	ENSPKIG00000005037	rbm47	85	78.509	Paramormyrops_kingsleyae
ENSSARG00000001735	RBM47	75	90.828	ENSPSIG00000017516	RBM47	82	90.828	Pelodiscus_sinensis
ENSSARG00000001735	RBM47	75	81.514	ENSPMGG00000018540	rbm47	85	79.287	Periophthalmus_magnuspinnatus
ENSSARG00000001735	RBM47	75	93.527	ENSPEMG00000011088	Rbm47	84	93.304	Peromyscus_maniculatus_bairdii
ENSSARG00000001735	RBM47	84	81.556	ENSPFOG00000007997	rbm47	85	77.778	Poecilia_formosa
ENSSARG00000001735	RBM47	84	81.333	ENSPLAG00000002072	rbm47	85	77.564	Poecilia_latipinna
ENSSARG00000001735	RBM47	84	81.858	ENSPMEG00000017492	rbm47	84	79.204	Poecilia_mexicana
ENSSARG00000001735	RBM47	84	81.333	ENSPREG00000008456	rbm47	85	77.564	Poecilia_reticulata
ENSSARG00000001735	RBM47	82	83.900	ENSPPYG00000014688	RBM47	83	84.127	Pongo_abelii
ENSSARG00000001735	RBM47	77	94.059	ENSPCAG00000011879	RBM47	77	94.307	Procavia_capensis
ENSSARG00000001735	RBM47	75	92.188	ENSPCOG00000023451	RBM47	85	91.295	Propithecus_coquereli
ENSSARG00000001735	RBM47	84	94.643	ENSPVAG00000003812	RBM47	85	94.643	Pteropus_vampyrus
ENSSARG00000001735	RBM47	75	80.260	ENSPNYG00000022868	rbm47	84	78.091	Pundamilia_nyererei
ENSSARG00000001735	RBM47	75	79.130	ENSPNAG00000007940	rbm47	86	78.913	Pygocentrus_nattereri
ENSSARG00000001735	RBM47	75	93.527	ENSRNOG00000002408	Rbm47	84	93.080	Rattus_norvegicus
ENSSARG00000001735	RBM47	75	95.982	ENSRBIG00000039601	RBM47	95	96.042	Rhinopithecus_bieti
ENSSARG00000001735	RBM47	75	95.982	ENSRROG00000044696	RBM47	95	96.042	Rhinopithecus_roxellana
ENSSARG00000001735	RBM47	75	94.631	ENSSBOG00000028475	RBM47	96	93.931	Saimiri_boliviensis_boliviensis
ENSSARG00000001735	RBM47	75	92.188	ENSSHAG00000017576	RBM47	85	92.188	Sarcophilus_harrisii
ENSSARG00000001735	RBM47	75	80.610	ENSSFOG00015012445	rbm47	79	79.303	Scleropages_formosus
ENSSARG00000001735	RBM47	84	78.714	ENSSFOG00015024101	RBM47	84	78.125	Scleropages_formosus
ENSSARG00000001735	RBM47	75	78.326	ENSSMAG00000009744	rbm47	86	75.966	Scophthalmus_maximus
ENSSARG00000001735	RBM47	75	82.183	ENSSDUG00000022684	rbm47	85	79.733	Seriola_dumerili
ENSSARG00000001735	RBM47	75	82.405	ENSSLDG00000003109	rbm47	85	79.955	Seriola_lalandi_dorsalis
ENSSARG00000001735	RBM47	75	89.509	ENSSPUG00000007515	RBM47	86	89.509	Sphenodon_punctatus
ENSSARG00000001735	RBM47	75	83.073	ENSSPAG00000001257	rbm47	85	80.624	Stegastes_partitus
ENSSARG00000001735	RBM47	84	96.205	ENSSSCG00000008796	RBM47	85	96.205	Sus_scrofa
ENSSARG00000001735	RBM47	75	91.051	ENSTGUG00000008705	RBM47	85	90.828	Taeniopygia_guttata
ENSSARG00000001735	RBM47	74	80.587	ENSTRUG00000014050	rbm47	85	77.955	Takifugu_rubripes
ENSSARG00000001735	RBM47	75	80.000	ENSTNIG00000006127	rbm47	85	77.273	Tetraodon_nigroviridis
ENSSARG00000001735	RBM47	73	88.391	ENSTBEG00000001607	RBM47	72	87.335	Tupaia_belangeri
ENSSARG00000001735	RBM47	84	96.429	ENSTTRG00000002839	RBM47	85	96.429	Tursiops_truncatus
ENSSARG00000001735	RBM47	84	96.205	ENSUAMG00000021346	RBM47	84	96.205	Ursus_americanus
ENSSARG00000001735	RBM47	71	95.070	ENSVVUG00000014774	RBM47	85	92.667	Vulpes_vulpes
ENSSARG00000001735	RBM47	81	87.054	ENSXETG00000012802	rbm47	93	85.640	Xenopus_tropicalis
ENSSARG00000001735	RBM47	73	81.250	ENSXCOG00000000780	rbm47	82	78.534	Xiphophorus_couchianus
ENSSARG00000001735	RBM47	84	81.416	ENSXMAG00000009874	rbm47	85	78.761	Xiphophorus_maculatus