EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000001822 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 8624 bases
Position: chrGeneScaffold_4693:34891-43514
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000001665	TruB_N	PF01509.18	5.5e-17	1	1
ENSSARP00000001665	PUA	PF01472.20	3.2e-18	1	1
ENSSARP00000001665	DKCLD	PF08068.12	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000001833	DKC1-201	1506	-	ENSSARP00000001665	501 (aa)	-	UPI00015810C4

Gene Model

Click here to download ENSSARG00000001822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000001822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000001822	DKC1	96	83.402	ENSG00000130826	DKC1	99	95.610	Homo_sapiens
ENSSARG00000001822	DKC1	87	77.803	ENSAPOG00000007799	dkc1	84	76.606	Acanthochromis_polyacanthus
ENSSARG00000001822	DKC1	89	86.353	ENSAMEG00000002776	DKC1	95	84.711	Ailuropoda_melanoleuca
ENSSARG00000001822	DKC1	83	79.904	ENSACIG00000022614	dkc1	90	77.494	Amphilophus_citrinellus
ENSSARG00000001822	DKC1	87	77.346	ENSAOCG00000013159	dkc1	93	74.353	Amphiprion_ocellaris
ENSSARG00000001822	DKC1	87	77.346	ENSAPEG00000002284	dkc1	93	74.837	Amphiprion_percula
ENSSARG00000001822	DKC1	83	77.701	ENSATEG00000013682	dkc1	89	75.717	Anabas_testudineus
ENSSARG00000001822	DKC1	88	78.427	ENSACAG00000015600	DKC1	76	78.000	Anolis_carolinensis
ENSSARG00000001822	DKC1	96	82.887	ENSANAG00000022732	DKC1	95	82.787	Aotus_nancymaae
ENSSARG00000001822	DKC1	79	82.915	ENSACLG00000015605	dkc1	81	82.915	Astatotilapia_calliptera
ENSSARG00000001822	DKC1	88	75.446	ENSAMXG00000017108	dkc1	79	81.454	Astyanax_mexicanus
ENSSARG00000001822	DKC1	99	83.034	ENSBTAG00000013045	DKC1	98	83.633	Bos_taurus
ENSSARG00000001822	DKC1	81	63.793	WBGene00010478	K01G5.5	89	64.646	Caenorhabditis_elegans
ENSSARG00000001822	DKC1	96	83.436	ENSCJAG00000004210	DKC1	98	82.903	Callithrix_jacchus
ENSSARG00000001822	DKC1	93	73.617	ENSCAFG00000009311	-	92	73.404	Canis_familiaris
ENSSARG00000001822	DKC1	97	82.258	ENSCAFG00000019620	-	95	82.556	Canis_familiaris
ENSSARG00000001822	DKC1	93	73.176	ENSCAFG00020009379	-	88	73.176	Canis_lupus_dingo
ENSSARG00000001822	DKC1	97	82.258	ENSCAFG00020008918	-	95	82.556	Canis_lupus_dingo
ENSSARG00000001822	DKC1	99	83.200	ENSCHIG00000017392	DKC1	98	84.032	Capra_hircus
ENSSARG00000001822	DKC1	96	83.099	ENSTSYG00000007681	DKC1	95	81.964	Carlito_syrichta
ENSSARG00000001822	DKC1	89	80.401	ENSCAPG00000003342	DKC1	99	83.141	Cavia_aperea
ENSSARG00000001822	DKC1	96	82.546	ENSCPOG00000008825	DKC1	93	82.947	Cavia_porcellus
ENSSARG00000001822	DKC1	96	74.180	ENSCCAG00000027418	DKC1	94	74.180	Cebus_capucinus
ENSSARG00000001822	DKC1	96	82.787	ENSCATG00000033602	DKC1	98	82.470	Cercocebus_atys
ENSSARG00000001822	DKC1	96	83.162	ENSCLAG00000000720	DKC1	93	83.789	Chinchilla_lanigera
ENSSARG00000001822	DKC1	96	82.787	ENSCSAG00000006706	DKC1	98	82.470	Chlorocebus_sabaeus
ENSSARG00000001822	DKC1	90	77.802	ENSCPBG00000005858	DKC1	87	83.990	Chrysemys_picta_bellii
ENSSARG00000001822	DKC1	78	75.318	ENSCING00000004599	-	77	75.253	Ciona_intestinalis
ENSSARG00000001822	DKC1	79	74.177	ENSCSAVG00000010047	-	88	74.177	Ciona_savignyi
ENSSARG00000001822	DKC1	96	82.787	ENSCANG00000027987	DKC1	98	82.470	Colobus_angolensis_palliatus
ENSSARG00000001822	DKC1	88	61.818	ENSCGRG00001016789	-	79	68.919	Cricetulus_griseus_chok1gshd
ENSSARG00000001822	DKC1	96	82.752	ENSCGRG00001014574	-	95	81.520	Cricetulus_griseus_chok1gshd
ENSSARG00000001822	DKC1	96	82.752	ENSCGRG00000016075	-	95	81.520	Cricetulus_griseus_crigri
ENSSARG00000001822	DKC1	97	59.671	ENSCGRG00000014809	-	77	68.919	Cricetulus_griseus_crigri
ENSSARG00000001822	DKC1	95	73.053	ENSCSEG00000012633	dkc1	96	73.404	Cynoglossus_semilaevis
ENSSARG00000001822	DKC1	80	81.203	ENSCVAG00000010155	dkc1	86	74.890	Cyprinodon_variegatus
ENSSARG00000001822	DKC1	82	80.000	ENSDARG00000016484	dkc1	79	81.955	Danio_rerio
ENSSARG00000001822	DKC1	99	81.818	ENSDNOG00000004218	DKC1	95	82.787	Dasypus_novemcinctus
ENSSARG00000001822	DKC1	59	73.810	ENSDORG00000013566	-	98	73.810	Dipodomys_ordii
ENSSARG00000001822	DKC1	85	69.014	FBgn0259937	Nop60B	88	64.000	Drosophila_melanogaster
ENSSARG00000001822	DKC1	88	80.227	ENSETEG00000016095	DKC1	89	80.227	Echinops_telfairi
ENSSARG00000001822	DKC1	67	73.373	ENSEBUG00000015962	dkc1	99	76.792	Eptatretus_burgeri
ENSSARG00000001822	DKC1	96	83.232	ENSEASG00005007484	DKC1	95	82.828	Equus_asinus_asinus
ENSSARG00000001822	DKC1	96	83.299	ENSECAG00000023524	DKC1	95	82.828	Equus_caballus
ENSSARG00000001822	DKC1	85	84.000	ENSEEUG00000003323	DKC1	99	84.000	Erinaceus_europaeus
ENSSARG00000001822	DKC1	87	76.484	ENSELUG00000014538	dkc1	90	75.501	Esox_lucius
ENSSARG00000001822	DKC1	97	85.331	ENSFCAG00000006577	DKC1	95	85.331	Felis_catus
ENSSARG00000001822	DKC1	87	78.458	ENSFALG00000011496	DKC1	85	77.827	Ficedula_albicollis
ENSSARG00000001822	DKC1	96	82.787	ENSFDAG00000002516	DKC1	96	82.992	Fukomys_damarensis
ENSSARG00000001822	DKC1	87	75.515	ENSFHEG00000004627	dkc1	85	74.943	Fundulus_heteroclitus
ENSSARG00000001822	DKC1	78	79.028	ENSGMOG00000017277	dkc1	100	79.028	Gadus_morhua
ENSSARG00000001822	DKC1	87	80.410	ENSGALG00000005054	DKC1	84	80.000	Gallus_gallus
ENSSARG00000001822	DKC1	88	76.082	ENSGAFG00000011486	dkc1	74	75.399	Gambusia_affinis
ENSSARG00000001822	DKC1	79	81.910	ENSGACG00000004373	dkc1	96	83.587	Gasterosteus_aculeatus
ENSSARG00000001822	DKC1	90	78.462	ENSGAGG00000011330	DKC1	83	81.379	Gopherus_agassizii
ENSSARG00000001822	DKC1	96	83.402	ENSGGOG00000001045	DKC1	98	83.068	Gorilla_gorilla
ENSSARG00000001822	DKC1	88	78.507	ENSHBUG00000012436	dkc1	86	78.054	Haplochromis_burtoni
ENSSARG00000001822	DKC1	96	80.855	ENSHGLG00000000649	DKC1	95	82.485	Heterocephalus_glaber_female
ENSSARG00000001822	DKC1	96	80.855	ENSHGLG00100001153	DKC1	96	82.485	Heterocephalus_glaber_male
ENSSARG00000001822	DKC1	79	82.278	ENSHCOG00000021099	dkc1	79	81.955	Hippocampus_comes
ENSSARG00000001822	DKC1	88	76.697	ENSIPUG00000010309	dkc1	85	76.697	Ictalurus_punctatus
ENSSARG00000001822	DKC1	96	73.469	ENSSTOG00000011904	-	91	73.673	Ictidomys_tridecemlineatus
ENSSARG00000001822	DKC1	94	79.158	ENSSTOG00000020149	-	92	78.782	Ictidomys_tridecemlineatus
ENSSARG00000001822	DKC1	90	85.683	ENSSTOG00000001074	-	93	85.463	Ictidomys_tridecemlineatus
ENSSARG00000001822	DKC1	55	74.729	ENSJJAG00000010086	-	92	74.729	Jaculus_jaculus
ENSSARG00000001822	DKC1	87	76.147	ENSKMAG00000008010	dkc1	86	75.854	Kryptolebias_marmoratus
ENSSARG00000001822	DKC1	87	76.092	ENSLBEG00000019122	dkc1	88	76.082	Labrus_bergylta
ENSSARG00000001822	DKC1	88	77.852	ENSLACG00000014025	DKC1	90	84.343	Latimeria_chalumnae
ENSSARG00000001822	DKC1	95	74.037	ENSLOCG00000013713	dkc1	99	74.180	Lepisosteus_oculatus
ENSSARG00000001822	DKC1	94	82.563	ENSLAFG00000000221	DKC1	93	82.353	Loxodonta_africana
ENSSARG00000001822	DKC1	96	82.582	ENSMFAG00000032398	DKC1	84	82.271	Macaca_fascicularis
ENSSARG00000001822	DKC1	96	82.787	ENSMMUG00000005768	DKC1	98	82.470	Macaca_mulatta
ENSSARG00000001822	DKC1	96	82.787	ENSMNEG00000034503	DKC1	98	82.470	Macaca_nemestrina
ENSSARG00000001822	DKC1	96	82.787	ENSMLEG00000034422	DKC1	98	82.470	Mandrillus_leucophaeus
ENSSARG00000001822	DKC1	82	80.929	ENSMAMG00000005427	dkc1	90	81.683	Mastacembelus_armatus
ENSSARG00000001822	DKC1	88	78.733	ENSMZEG00005014503	dkc1	86	78.281	Maylandia_zebra
ENSSARG00000001822	DKC1	79	80.653	ENSMGAG00000009238	DKC1	87	80.149	Meleagris_gallopavo
ENSSARG00000001822	DKC1	58	73.973	ENSMAUG00000016454	-	97	73.973	Mesocricetus_auratus
ENSSARG00000001822	DKC1	87	73.077	ENSMICG00000002818	-	99	75.824	Microcebus_murinus
ENSSARG00000001822	DKC1	97	81.010	ENSMICG00000038751	-	95	80.658	Microcebus_murinus
ENSSARG00000001822	DKC1	56	69.892	ENSMOCG00000001169	-	92	69.892	Microtus_ochrogaster
ENSSARG00000001822	DKC1	79	81.910	ENSMMOG00000020348	dkc1	87	81.910	Mola_mola
ENSSARG00000001822	DKC1	86	81.481	ENSMODG00000009243	DKC1	70	85.500	Monodelphis_domestica
ENSSARG00000001822	DKC1	88	76.310	ENSMALG00000009454	dkc1	85	76.310	Monopterus_albus
ENSSARG00000001822	DKC1	93	73.849	MGP_CAROLIEiJ_G0033191	Dkc1	86	95.238	Mus_caroli
ENSSARG00000001822	DKC1	94	82.803	ENSMUSG00000031403	Dkc1	92	83.015	Mus_musculus
ENSSARG00000001822	DKC1	94	81.395	MGP_PahariEiJ_G0031735	Dkc1	93	81.818	Mus_pahari
ENSSARG00000001822	DKC1	94	82.378	MGP_SPRETEiJ_G0034351	Dkc1	92	82.378	Mus_spretus
ENSSARG00000001822	DKC1	97	83.401	ENSMPUG00000016136	DKC1	91	82.996	Mustela_putorius_furo
ENSSARG00000001822	DKC1	88	80.769	ENSMLUG00000011918	DKC1	95	77.778	Myotis_lucifugus
ENSSARG00000001822	DKC1	58	74.403	ENSNGAG00000015724	-	93	74.286	Nannospalax_galili
ENSSARG00000001822	DKC1	79	82.872	ENSNBRG00000005638	dkc1	80	82.915	Neolamprologus_brichardi
ENSSARG00000001822	DKC1	96	83.197	ENSNLEG00000014323	DKC1	95	82.992	Nomascus_leucogenys
ENSSARG00000001822	DKC1	84	80.907	ENSMEUG00000001066	DKC1	89	81.235	Notamacropus_eugenii
ENSSARG00000001822	DKC1	73	81.319	ENSOPRG00000005248	DKC1	73	81.319	Ochotona_princeps
ENSSARG00000001822	DKC1	58	74.658	ENSODEG00000000549	-	92	74.286	Octodon_degus
ENSSARG00000001822	DKC1	86	87.179	ENSODEG00000011816	-	89	84.649	Octodon_degus
ENSSARG00000001822	DKC1	88	79.233	ENSONIG00000013889	dkc1	86	78.829	Oreochromis_niloticus
ENSSARG00000001822	DKC1	85	83.841	ENSOANG00000008713	-	96	80.983	Ornithorhynchus_anatinus
ENSSARG00000001822	DKC1	57	64.310	ENSOANG00000022295	-	95	63.127	Ornithorhynchus_anatinus
ENSSARG00000001822	DKC1	94	83.087	ENSOCUG00000012646	DKC1	92	83.298	Oryctolagus_cuniculus
ENSSARG00000001822	DKC1	79	80.299	ENSORLG00000018748	dkc1	80	79.506	Oryzias_latipes
ENSSARG00000001822	DKC1	82	79.512	ENSOMEG00000005786	dkc1	83	77.593	Oryzias_melastigma
ENSSARG00000001822	DKC1	96	82.863	ENSOGAG00000003399	DKC1	93	82.438	Otolemur_garnettii
ENSSARG00000001822	DKC1	99	83.400	ENSOARG00000003047	DKC1	98	84.232	Ovis_aries
ENSSARG00000001822	DKC1	96	82.787	ENSPPAG00000023820	DKC1	98	83.068	Pan_paniscus
ENSSARG00000001822	DKC1	89	87.472	ENSPPRG00000009104	DKC1	95	85.507	Panthera_pardus
ENSSARG00000001822	DKC1	89	85.906	ENSPTIG00000017469	DKC1	95	83.162	Panthera_tigris_altaica
ENSSARG00000001822	DKC1	96	83.402	ENSPTRG00000022449	DKC1	98	83.068	Pan_troglodytes
ENSSARG00000001822	DKC1	96	83.607	ENSPTRG00000043416	-	83	83.197	Pan_troglodytes
ENSSARG00000001822	DKC1	96	82.787	ENSPANG00000011978	DKC1	98	82.470	Papio_anubis
ENSSARG00000001822	DKC1	79	83.503	ENSPKIG00000008443	dkc1	84	83.291	Paramormyrops_kingsleyae
ENSSARG00000001822	DKC1	71	86.592	ENSPSIG00000013765	DKC1	86	86.592	Pelodiscus_sinensis
ENSSARG00000001822	DKC1	87	75.391	ENSPMGG00000004097	dkc1	73	81.407	Periophthalmus_magnuspinnatus
ENSSARG00000001822	DKC1	93	52.311	ENSPEMG00000013348	Dkc1	91	52.083	Peromyscus_maniculatus_bairdii
ENSSARG00000001822	DKC1	85	82.944	ENSPCIG00000016706	DKC1	72	81.986	Phascolarctos_cinereus
ENSSARG00000001822	DKC1	87	76.659	ENSPFOG00000018653	dkc1	85	75.854	Poecilia_formosa
ENSSARG00000001822	DKC1	87	76.659	ENSPLAG00000003272	dkc1	77	75.854	Poecilia_latipinna
ENSSARG00000001822	DKC1	87	77.626	ENSPMEG00000010413	dkc1	85	77.045	Poecilia_mexicana
ENSSARG00000001822	DKC1	87	77.397	ENSPREG00000004100	dkc1	78	81.407	Poecilia_reticulata
ENSSARG00000001822	DKC1	99	83.267	ENSPPYG00000020892	DKC1	99	83.068	Pongo_abelii
ENSSARG00000001822	DKC1	75	87.701	ENSPCAG00000015034	DKC1	72	88.347	Procavia_capensis
ENSSARG00000001822	DKC1	97	82.449	ENSPCOG00000026874	DKC1	95	82.041	Propithecus_coquereli
ENSSARG00000001822	DKC1	96	83.711	ENSPVAG00000009222	DKC1	95	83.711	Pteropus_vampyrus
ENSSARG00000001822	DKC1	87	77.551	ENSPNYG00000020063	dkc1	88	77.009	Pundamilia_nyererei
ENSSARG00000001822	DKC1	91	74.403	ENSPNAG00000005780	dkc1	82	80.145	Pygocentrus_nattereri
ENSSARG00000001822	DKC1	93	80.042	ENSRNOG00000055562	Dkc1	92	80.042	Rattus_norvegicus
ENSSARG00000001822	DKC1	96	82.787	ENSRBIG00000028457	DKC1	82	82.582	Rhinopithecus_bieti
ENSSARG00000001822	DKC1	96	82.787	ENSRROG00000044780	DKC1	98	82.470	Rhinopithecus_roxellana
ENSSARG00000001822	DKC1	77	67.448	YLR175W	-	80	67.448	Saccharomyces_cerevisiae
ENSSARG00000001822	DKC1	96	82.992	ENSSBOG00000033746	DKC1	95	83.197	Saimiri_boliviensis_boliviensis
ENSSARG00000001822	DKC1	87	82.569	ENSSHAG00000002463	DKC1	91	81.881	Sarcophilus_harrisii
ENSSARG00000001822	DKC1	87	78.458	ENSSFOG00015009585	dkc1	85	77.626	Scleropages_formosus
ENSSARG00000001822	DKC1	88	76.364	ENSSMAG00000002552	dkc1	89	73.820	Scophthalmus_maximus
ENSSARG00000001822	DKC1	87	77.650	ENSSDUG00000009963	dkc1	84	79.196	Seriola_dumerili
ENSSARG00000001822	DKC1	82	80.685	ENSSLDG00000019342	dkc1	83	82.412	Seriola_lalandi_dorsalis
ENSSARG00000001822	DKC1	94	75.359	ENSSPUG00000018907	DKC1	92	75.720	Sphenodon_punctatus
ENSSARG00000001822	DKC1	87	76.376	ENSSPAG00000002585	dkc1	81	76.376	Stegastes_partitus
ENSSARG00000001822	DKC1	96	83.434	ENSSSCG00000012823	DKC1	95	83.434	Sus_scrofa
ENSSARG00000001822	DKC1	79	80.653	ENSTGUG00000006781	DKC1	94	77.541	Taeniopygia_guttata
ENSSARG00000001822	DKC1	87	77.064	ENSTRUG00000004413	dkc1	85	77.064	Takifugu_rubripes
ENSSARG00000001822	DKC1	95	62.628	ENSTNIG00000002582	dkc1	94	62.423	Tetraodon_nigroviridis
ENSSARG00000001822	DKC1	63	84.161	ENSTBEG00000011262	DKC1	89	84.211	Tupaia_belangeri
ENSSARG00000001822	DKC1	55	88.809	ENSTTRG00000008089	DKC1	55	88.809	Tursiops_truncatus
ENSSARG00000001822	DKC1	96	83.469	ENSUAMG00000022721	DKC1	88	89.260	Ursus_americanus
ENSSARG00000001822	DKC1	96	83.061	ENSUMAG00000016899	DKC1	92	90.212	Ursus_maritimus
ENSSARG00000001822	DKC1	93	68.723	ENSVVUG00000021671	-	86	68.870	Vulpes_vulpes
ENSSARG00000001822	DKC1	97	81.312	ENSVVUG00000020734	-	86	81.400	Vulpes_vulpes
ENSSARG00000001822	DKC1	89	77.232	ENSXETG00000032517	DKC1	85	77.904	Xenopus_tropicalis
ENSSARG00000001822	DKC1	88	76.818	ENSXCOG00000005498	dkc1	85	81.658	Xiphophorus_couchianus
ENSSARG00000001822	DKC1	88	76.765	ENSXMAG00000004919	dkc1	86	76.082	Xiphophorus_maculatus