EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000002479 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 57193 bases
Position: chrGeneScaffold_925:14169-71361
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002272	Ago_hook	PF10427.9	4.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000002511	TNRC6A-201	4683	-	ENSSARP00000002272	1561 (aa)	-	UPI000158116F

Gene Model

Click here to download ENSSARG00000002479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000002479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000002479	TNRC6A	64	47.802	ENSSARG00000006816	TNRC6C	60	47.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000002479	TNRC6A	89	83.333	ENSG00000090905	TNRC6A	99	77.434	Homo_sapiens
ENSSARG00000002479	TNRC6A	89	84.239	ENSAMEG00000009333	TNRC6A	74	83.877	Ailuropoda_melanoleuca
ENSSARG00000002479	TNRC6A	88	72.110	ENSAPLG00000009978	TNRC6A	73	71.480	Anas_platyrhynchos
ENSSARG00000002479	TNRC6A	86	57.482	ENSACAG00000011857	TNRC6A	68	57.810	Anolis_carolinensis
ENSSARG00000002479	TNRC6A	90	82.790	ENSANAG00000025252	TNRC6A	79	83.333	Aotus_nancymaae
ENSSARG00000002479	TNRC6A	78	50.000	ENSAMXG00000019919	tnrc6a	68	48.582	Astyanax_mexicanus
ENSSARG00000002479	TNRC6A	89	82.428	ENSBTAG00000017999	TNRC6A	73	83.152	Bos_taurus
ENSSARG00000002479	TNRC6A	90	82.790	ENSCJAG00000020677	TNRC6A	72	83.333	Callithrix_jacchus
ENSSARG00000002479	TNRC6A	89	84.239	ENSCAFG00000017531	TNRC6A	72	83.877	Canis_familiaris
ENSSARG00000002479	TNRC6A	89	84.239	ENSCAFG00020021160	TNRC6A	73	83.877	Canis_lupus_dingo
ENSSARG00000002479	TNRC6A	89	76.733	ENSCHIG00000019448	TNRC6A	78	76.381	Capra_hircus
ENSSARG00000002479	TNRC6A	89	84.239	ENSTSYG00000012711	TNRC6A	73	83.877	Carlito_syrichta
ENSSARG00000002479	TNRC6A	89	76.269	ENSCPOG00000036684	TNRC6A	71	75.443	Cavia_porcellus
ENSSARG00000002479	TNRC6A	89	82.790	ENSCCAG00000033664	TNRC6A	73	83.333	Cebus_capucinus
ENSSARG00000002479	TNRC6A	89	80.143	ENSCATG00000019284	TNRC6A	72	80.859	Cercocebus_atys
ENSSARG00000002479	TNRC6A	89	75.029	ENSCLAG00000010217	TNRC6A	71	74.329	Chinchilla_lanigera
ENSSARG00000002479	TNRC6A	89	83.152	ENSCSAG00000006561	TNRC6A	72	83.877	Chlorocebus_sabaeus
ENSSARG00000002479	TNRC6A	77	86.593	ENSCHOG00000009374	TNRC6A	61	86.154	Choloepus_hoffmanni
ENSSARG00000002479	TNRC6A	81	65.465	ENSCPBG00000001881	TNRC6A	70	64.910	Chrysemys_picta_bellii
ENSSARG00000002479	TNRC6A	89	83.333	ENSCANG00000041549	TNRC6A	72	84.058	Colobus_angolensis_palliatus
ENSSARG00000002479	TNRC6A	89	83.877	ENSCGRG00001015021	Tnrc6a	74	83.152	Cricetulus_griseus_chok1gshd
ENSSARG00000002479	TNRC6A	89	76.179	ENSCGRG00000013351	Tnrc6a	71	75.708	Cricetulus_griseus_crigri
ENSSARG00000002479	TNRC6A	79	51.254	ENSDARG00000079688	tnrc6a	69	51.075	Danio_rerio
ENSSARG00000002479	TNRC6A	89	82.554	ENSDNOG00000013989	TNRC6A	72	82.194	Dasypus_novemcinctus
ENSSARG00000002479	TNRC6A	89	82.428	ENSETEG00000014658	TNRC6A	74	82.065	Echinops_telfairi
ENSSARG00000002479	TNRC6A	89	83.514	ENSEASG00005017693	TNRC6A	73	84.601	Equus_asinus_asinus
ENSSARG00000002479	TNRC6A	89	83.514	ENSECAG00000025056	TNRC6A	73	84.601	Equus_caballus
ENSSARG00000002479	TNRC6A	89	81.884	ENSEEUG00000004530	TNRC6A	73	81.522	Erinaceus_europaeus
ENSSARG00000002479	TNRC6A	89	82.246	ENSFCAG00000025236	TNRC6A	73	82.971	Felis_catus
ENSSARG00000002479	TNRC6A	89	70.902	ENSFALG00000003757	TNRC6A	71	70.417	Ficedula_albicollis
ENSSARG00000002479	TNRC6A	80	66.291	ENSGALG00000006068	TNRC6A	70	65.928	Gallus_gallus
ENSSARG00000002479	TNRC6A	80	64.930	ENSGAGG00000023209	TNRC6A	70	64.494	Gopherus_agassizii
ENSSARG00000002479	TNRC6A	89	83.152	ENSGGOG00000005137	TNRC6A	73	83.877	Gorilla_gorilla
ENSSARG00000002479	TNRC6A	85	62.100	ENSHGLG00000007368	-	68	61.460	Heterocephalus_glaber_female
ENSSARG00000002479	TNRC6A	88	76.038	ENSHGLG00000012474	-	71	75.089	Heterocephalus_glaber_female
ENSSARG00000002479	TNRC6A	88	76.322	ENSHGLG00100012496	-	71	75.601	Heterocephalus_glaber_male
ENSSARG00000002479	TNRC6A	89	83.696	ENSSTOG00000023394	TNRC6A	71	83.333	Ictidomys_tridecemlineatus
ENSSARG00000002479	TNRC6A	89	57.570	ENSLACG00000006277	TNRC6A	74	59.155	Latimeria_chalumnae
ENSSARG00000002479	TNRC6A	86	79.245	ENSLOCG00000005517	tnrc6a	63	79.245	Lepisosteus_oculatus
ENSSARG00000002479	TNRC6A	89	77.187	ENSLAFG00000004209	TNRC6A	73	76.686	Loxodonta_africana
ENSSARG00000002479	TNRC6A	89	80.143	ENSMFAG00000003824	TNRC6A	73	80.859	Macaca_fascicularis
ENSSARG00000002479	TNRC6A	89	83.152	ENSMMUG00000020428	TNRC6A	72	83.877	Macaca_mulatta
ENSSARG00000002479	TNRC6A	89	83.152	ENSMNEG00000034854	TNRC6A	72	83.877	Macaca_nemestrina
ENSSARG00000002479	TNRC6A	89	80.143	ENSMLEG00000042737	TNRC6A	72	80.859	Mandrillus_leucophaeus
ENSSARG00000002479	TNRC6A	88	71.248	ENSMGAG00000006455	TNRC6A	68	70.886	Meleagris_gallopavo
ENSSARG00000002479	TNRC6A	89	76.415	ENSMAUG00000012750	Tnrc6a	72	75.534	Mesocricetus_auratus
ENSSARG00000002479	TNRC6A	90	84.058	ENSMICG00000030685	TNRC6A	73	83.696	Microcebus_murinus
ENSSARG00000002479	TNRC6A	89	76.269	ENSMOCG00000000152	Tnrc6a	71	75.679	Microtus_ochrogaster
ENSSARG00000002479	TNRC6A	88	75.362	ENSMODG00000016348	TNRC6A	69	75.725	Monodelphis_domestica
ENSSARG00000002479	TNRC6A	89	75.919	MGP_CAROLIEiJ_G0030425	Tnrc6a	72	75.919	Mus_caroli
ENSSARG00000002479	TNRC6A	89	75.797	ENSMUSG00000052707	Tnrc6a	64	82.948	Mus_musculus
ENSSARG00000002479	TNRC6A	89	75.472	MGP_PahariEiJ_G0013635	Tnrc6a	82	90.598	Mus_pahari
ENSSARG00000002479	TNRC6A	89	83.152	MGP_SPRETEiJ_G0031539	Tnrc6a	72	82.065	Mus_spretus
ENSSARG00000002479	TNRC6A	89	69.384	ENSMPUG00000012324	TNRC6A	71	70.652	Mustela_putorius_furo
ENSSARG00000002479	TNRC6A	89	83.152	ENSMLUG00000002701	TNRC6A	74	82.065	Myotis_lucifugus
ENSSARG00000002479	TNRC6A	89	75.676	ENSNGAG00000020702	Tnrc6a	71	75.181	Nannospalax_galili
ENSSARG00000002479	TNRC6A	89	80.143	ENSNLEG00000011851	TNRC6A	73	80.859	Nomascus_leucogenys
ENSSARG00000002479	TNRC6A	65	72.191	ENSMEUG00000015959	-	53	72.404	Notamacropus_eugenii
ENSSARG00000002479	TNRC6A	89	78.261	ENSOPRG00000005819	TNRC6A	72	78.986	Ochotona_princeps
ENSSARG00000002479	TNRC6A	88	75.060	ENSODEG00000012802	TNRC6A	71	74.580	Octodon_degus
ENSSARG00000002479	TNRC6A	77	73.551	ENSOANG00000007672	TNRC6A	70	73.188	Ornithorhynchus_anatinus
ENSSARG00000002479	TNRC6A	89	80.435	ENSOCUG00000004325	TNRC6A	73	80.072	Oryctolagus_cuniculus
ENSSARG00000002479	TNRC6A	89	83.877	ENSOGAG00000006666	TNRC6A	72	83.514	Otolemur_garnettii
ENSSARG00000002479	TNRC6A	89	81.720	ENSOARG00000017950	TNRC6A	73	82.437	Ovis_aries
ENSSARG00000002479	TNRC6A	89	83.152	ENSPPAG00000028379	TNRC6A	73	83.877	Pan_paniscus
ENSSARG00000002479	TNRC6A	89	82.246	ENSPPRG00000005861	TNRC6A	72	82.971	Panthera_pardus
ENSSARG00000002479	TNRC6A	89	82.246	ENSPTIG00000006346	TNRC6A	72	82.971	Panthera_tigris_altaica
ENSSARG00000002479	TNRC6A	89	83.152	ENSPTRG00000007898	TNRC6A	73	83.877	Pan_troglodytes
ENSSARG00000002479	TNRC6A	89	83.333	ENSPANG00000018523	TNRC6A	74	84.058	Papio_anubis
ENSSARG00000002479	TNRC6A	75	71.698	ENSPKIG00000012859	tnrc6a	66	71.698	Paramormyrops_kingsleyae
ENSSARG00000002479	TNRC6A	64	69.892	ENSPSIG00000003965	TNRC6A	68	69.892	Pelodiscus_sinensis
ENSSARG00000002479	TNRC6A	89	76.325	ENSPEMG00000016318	Tnrc6a	71	75.736	Peromyscus_maniculatus_bairdii
ENSSARG00000002479	TNRC6A	88	75.362	ENSPCIG00000012106	TNRC6A	73	75.725	Phascolarctos_cinereus
ENSSARG00000002479	TNRC6A	89	83.333	ENSPPYG00000007202	TNRC6A	72	84.058	Pongo_abelii
ENSSARG00000002479	TNRC6A	83	88.132	ENSPCAG00000008260	TNRC6A	66	88.132	Procavia_capensis
ENSSARG00000002479	TNRC6A	89	84.058	ENSPCOG00000010134	TNRC6A	71	83.696	Propithecus_coquereli
ENSSARG00000002479	TNRC6A	90	63.949	ENSPVAG00000012066	TNRC6A	81	66.123	Pteropus_vampyrus
ENSSARG00000002479	TNRC6A	89	82.971	ENSRNOG00000024737	Tnrc6a	72	81.884	Rattus_norvegicus
ENSSARG00000002479	TNRC6A	89	83.333	ENSRBIG00000014222	TNRC6A	73	84.058	Rhinopithecus_bieti
ENSSARG00000002479	TNRC6A	89	83.333	ENSRROG00000032360	TNRC6A	72	84.058	Rhinopithecus_roxellana
ENSSARG00000002479	TNRC6A	89	82.609	ENSSBOG00000036197	TNRC6A	73	83.152	Saimiri_boliviensis_boliviensis
ENSSARG00000002479	TNRC6A	80	67.760	ENSSHAG00000008811	TNRC6A	82	76.730	Sarcophilus_harrisii
ENSSARG00000002479	TNRC6A	75	77.358	ENSSFOG00015008920	tnrc6a	63	77.358	Scleropages_formosus
ENSSARG00000002479	TNRC6A	81	66.123	ENSSPUG00000010525	TNRC6A	72	69.620	Sphenodon_punctatus
ENSSARG00000002479	TNRC6A	89	82.790	ENSSSCG00000038870	TNRC6A	79	83.696	Sus_scrofa
ENSSARG00000002479	TNRC6A	89	64.782	ENSTGUG00000006142	TNRC6A	71	64.311	Taeniopygia_guttata
ENSSARG00000002479	TNRC6A	89	91.848	ENSTBEG00000014965	TNRC6A	74	91.486	Tupaia_belangeri
ENSSARG00000002479	TNRC6A	89	82.246	ENSTTRG00000002008	TNRC6A	71	82.971	Tursiops_truncatus
ENSSARG00000002479	TNRC6A	89	77.765	ENSUAMG00000006656	-	83	77.289	Ursus_americanus
ENSSARG00000002479	TNRC6A	90	84.239	ENSUMAG00000008274	TNRC6A	73	83.877	Ursus_maritimus
ENSSARG00000002479	TNRC6A	89	84.239	ENSVVUG00000005380	TNRC6A	79	83.877	Vulpes_vulpes
ENSSARG00000002479	TNRC6A	86	58.802	ENSXETG00000030437	TNRC6A	71	58.984	Xenopus_tropicalis