EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000002540 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 61950 bases
Position: chrGeneScaffold_6876:102636-164585
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002339	S1	PF00575.23	1.5e-43	1	4
ENSSARP00000002339	S1	PF00575.23	1.5e-43	2	4
ENSSARP00000002339	S1	PF00575.23	1.5e-43	3	4
ENSSARP00000002339	S1	PF00575.23	1.5e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000002584	PDCD11-201	5559	-	ENSSARP00000002339	1852 (aa)	-	UPI0001581E80

Gene Model

Click here to download ENSSARG00000002540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000002540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000002540	PDCD11	74	91.071	ENSG00000148843	PDCD11	92	80.000	Homo_sapiens
ENSSARG00000002540	PDCD11	70	63.265	ENSAPOG00000015629	pdcd11	76	63.265	Acanthochromis_polyacanthus
ENSSARG00000002540	PDCD11	71	89.286	ENSAMEG00000017935	PDCD11	77	89.286	Ailuropoda_melanoleuca
ENSSARG00000002540	PDCD11	70	65.306	ENSAOCG00000015287	pdcd11	76	65.306	Amphiprion_ocellaris
ENSSARG00000002540	PDCD11	66	65.306	ENSATEG00000021043	pdcd11	80	65.306	Anabas_testudineus
ENSSARG00000002540	PDCD11	70	70.909	ENSAPLG00000010301	PDCD11	77	70.909	Anas_platyrhynchos
ENSSARG00000002540	PDCD11	74	70.909	ENSACAG00000004796	PDCD11	80	70.909	Anolis_carolinensis
ENSSARG00000002540	PDCD11	70	90.566	ENSANAG00000034576	PDCD11	80	90.566	Aotus_nancymaae
ENSSARG00000002540	PDCD11	56	67.347	ENSACLG00000018236	pdcd11	79	67.347	Astatotilapia_calliptera
ENSSARG00000002540	PDCD11	66	74.000	ENSAMXG00000005458	pdcd11	80	74.000	Astyanax_mexicanus
ENSSARG00000002540	PDCD11	74	85.455	ENSBTAG00000009715	PDCD11	80	85.455	Bos_taurus
ENSSARG00000002540	PDCD11	74	90.566	ENSCJAG00000018257	PDCD11	77	90.566	Callithrix_jacchus
ENSSARG00000002540	PDCD11	74	91.071	ENSCAFG00000010411	PDCD11	77	91.071	Canis_familiaris
ENSSARG00000002540	PDCD11	74	91.071	ENSCAFG00020010369	PDCD11	77	91.071	Canis_lupus_dingo
ENSSARG00000002540	PDCD11	74	90.566	ENSCHIG00000025218	PDCD11	80	90.566	Capra_hircus
ENSSARG00000002540	PDCD11	68	89.286	ENSTSYG00000033423	PDCD11	76	89.286	Carlito_syrichta
ENSSARG00000002540	PDCD11	59	85.714	ENSCAPG00000005386	PDCD11	67	85.714	Cavia_aperea
ENSSARG00000002540	PDCD11	73	85.714	ENSCPOG00000010957	PDCD11	77	88.889	Cavia_porcellus
ENSSARG00000002540	PDCD11	71	92.453	ENSCCAG00000018950	PDCD11	77	92.453	Cebus_capucinus
ENSSARG00000002540	PDCD11	74	91.071	ENSCATG00000044331	PDCD11	80	91.071	Cercocebus_atys
ENSSARG00000002540	PDCD11	74	85.714	ENSCLAG00000001029	PDCD11	80	85.714	Chinchilla_lanigera
ENSSARG00000002540	PDCD11	74	91.071	ENSCSAG00000005346	PDCD11	80	91.071	Chlorocebus_sabaeus
ENSSARG00000002540	PDCD11	56	85.294	ENSCHOG00000004796	PDCD11	70	85.294	Choloepus_hoffmanni
ENSSARG00000002540	PDCD11	62	74.545	ENSCPBG00000024487	PDCD11	73	74.545	Chrysemys_picta_bellii
ENSSARG00000002540	PDCD11	74	91.071	ENSCANG00000043300	PDCD11	80	91.071	Colobus_angolensis_palliatus
ENSSARG00000002540	PDCD11	74	91.071	ENSCGRG00001006458	Pdcd11	80	91.071	Cricetulus_griseus_chok1gshd
ENSSARG00000002540	PDCD11	74	91.071	ENSCGRG00000003583	Pdcd11	80	91.071	Cricetulus_griseus_crigri
ENSSARG00000002540	PDCD11	67	40.351	ENSCSEG00000010739	pdcd11	80	40.351	Cynoglossus_semilaevis
ENSSARG00000002540	PDCD11	60	65.306	ENSCVAG00000018903	pdcd11	74	65.306	Cyprinodon_variegatus
ENSSARG00000002540	PDCD11	67	61.538	ENSDARG00000052480	pdcd11	72	61.538	Danio_rerio
ENSSARG00000002540	PDCD11	74	91.071	ENSDNOG00000013838	PDCD11	80	91.071	Dasypus_novemcinctus
ENSSARG00000002540	PDCD11	74	87.500	ENSDORG00000010420	Pdcd11	80	87.500	Dipodomys_ordii
ENSSARG00000002540	PDCD11	67	76.199	ENSETEG00000000813	PDCD11	74	76.199	Echinops_telfairi
ENSSARG00000002540	PDCD11	69	91.071	ENSEASG00005015159	PDCD11	76	91.071	Equus_asinus_asinus
ENSSARG00000002540	PDCD11	71	91.071	ENSECAG00000020507	PDCD11	77	91.071	Equus_caballus
ENSSARG00000002540	PDCD11	61	85.714	ENSEEUG00000009245	PDCD11	69	85.714	Erinaceus_europaeus
ENSSARG00000002540	PDCD11	71	69.388	ENSELUG00000004211	pdcd11	78	69.388	Esox_lucius
ENSSARG00000002540	PDCD11	74	91.071	ENSFCAG00000002384	PDCD11	80	91.071	Felis_catus
ENSSARG00000002540	PDCD11	73	72.727	ENSFALG00000008775	PDCD11	79	72.727	Ficedula_albicollis
ENSSARG00000002540	PDCD11	74	85.714	ENSFDAG00000009532	PDCD11	80	85.714	Fukomys_damarensis
ENSSARG00000002540	PDCD11	58	67.347	ENSFHEG00000022997	pdcd11	71	67.347	Fundulus_heteroclitus
ENSSARG00000002540	PDCD11	51	69.388	ENSGMOG00000004186	pdcd11	67	69.388	Gadus_morhua
ENSSARG00000002540	PDCD11	66	50.733	ENSGALG00000008265	PDCD11	90	50.733	Gallus_gallus
ENSSARG00000002540	PDCD11	63	65.306	ENSGAFG00000012806	pdcd11	74	65.306	Gambusia_affinis
ENSSARG00000002540	PDCD11	70	65.306	ENSGACG00000018233	pdcd11	76	65.306	Gasterosteus_aculeatus
ENSSARG00000002540	PDCD11	66	74.545	ENSGAGG00000024314	PDCD11	75	74.545	Gopherus_agassizii
ENSSARG00000002540	PDCD11	71	90.909	ENSGGOG00000011621	PDCD11	80	90.909	Gorilla_gorilla
ENSSARG00000002540	PDCD11	63	67.347	ENSHBUG00000020226	pdcd11	76	67.347	Haplochromis_burtoni
ENSSARG00000002540	PDCD11	74	85.714	ENSHGLG00000001462	PDCD11	80	85.714	Heterocephalus_glaber_female
ENSSARG00000002540	PDCD11	74	85.714	ENSHGLG00100018779	PDCD11	81	85.714	Heterocephalus_glaber_male
ENSSARG00000002540	PDCD11	71	62.745	ENSHCOG00000016006	pdcd11	76	62.745	Hippocampus_comes
ENSSARG00000002540	PDCD11	56	40.232	ENSIPUG00000015102	pdcd11	97	44.366	Ictalurus_punctatus
ENSSARG00000002540	PDCD11	71	89.286	ENSSTOG00000014553	PDCD11	77	89.286	Ictidomys_tridecemlineatus
ENSSARG00000002540	PDCD11	74	91.071	ENSJJAG00000015523	Pdcd11	80	91.071	Jaculus_jaculus
ENSSARG00000002540	PDCD11	70	72.727	ENSLOCG00000011818	pdcd11	76	72.727	Lepisosteus_oculatus
ENSSARG00000002540	PDCD11	74	91.071	ENSLAFG00000008398	PDCD11	80	91.071	Loxodonta_africana
ENSSARG00000002540	PDCD11	74	91.071	ENSMFAG00000044058	PDCD11	80	91.071	Macaca_fascicularis
ENSSARG00000002540	PDCD11	74	91.071	ENSMMUG00000007058	PDCD11	80	91.071	Macaca_mulatta
ENSSARG00000002540	PDCD11	74	91.071	ENSMNEG00000040726	PDCD11	80	91.071	Macaca_nemestrina
ENSSARG00000002540	PDCD11	73	91.071	ENSMLEG00000040978	PDCD11	81	91.071	Mandrillus_leucophaeus
ENSSARG00000002540	PDCD11	70	61.224	ENSMAMG00000009572	pdcd11	80	61.224	Mastacembelus_armatus
ENSSARG00000002540	PDCD11	63	67.347	ENSMZEG00005008949	pdcd11	76	67.347	Maylandia_zebra
ENSSARG00000002540	PDCD11	73	72.727	ENSMGAG00000010482	PDCD11	80	72.727	Meleagris_gallopavo
ENSSARG00000002540	PDCD11	71	91.071	ENSMAUG00000014924	Pdcd11	82	91.071	Mesocricetus_auratus
ENSSARG00000002540	PDCD11	71	89.286	ENSMICG00000012421	PDCD11	77	89.286	Microcebus_murinus
ENSSARG00000002540	PDCD11	74	83.929	ENSMOCG00000021792	Pdcd11	80	83.929	Microtus_ochrogaster
ENSSARG00000002540	PDCD11	57	62.000	ENSMMOG00000007572	pdcd11	97	41.776	Mola_mola
ENSSARG00000002540	PDCD11	67	80.000	ENSMODG00000011077	PDCD11	74	80.000	Monodelphis_domestica
ENSSARG00000002540	PDCD11	61	63.265	ENSMALG00000003859	pdcd11	96	43.262	Monopterus_albus
ENSSARG00000002540	PDCD11	74	89.286	MGP_CAROLIEiJ_G0023050	Pdcd11	80	89.286	Mus_caroli
ENSSARG00000002540	PDCD11	74	89.286	ENSMUSG00000025047	Pdcd11	80	89.286	Mus_musculus
ENSSARG00000002540	PDCD11	74	89.286	MGP_PahariEiJ_G0014540	Pdcd11	80	89.286	Mus_pahari
ENSSARG00000002540	PDCD11	74	89.286	MGP_SPRETEiJ_G0023971	Pdcd11	80	89.286	Mus_spretus
ENSSARG00000002540	PDCD11	74	91.071	ENSMPUG00000016829	PDCD11	80	91.071	Mustela_putorius_furo
ENSSARG00000002540	PDCD11	71	89.286	ENSMLUG00000004997	PDCD11	77	89.286	Myotis_lucifugus
ENSSARG00000002540	PDCD11	74	90.909	ENSNGAG00000018143	Pdcd11	80	90.909	Nannospalax_galili
ENSSARG00000002540	PDCD11	52	37.342	ENSNBRG00000021596	pdcd11	95	48.810	Neolamprologus_brichardi
ENSSARG00000002540	PDCD11	74	91.071	ENSNLEG00000026700	PDCD11	79	91.071	Nomascus_leucogenys
ENSSARG00000002540	PDCD11	53	82.353	ENSMEUG00000013719	-	54	82.353	Notamacropus_eugenii
ENSSARG00000002540	PDCD11	71	92.857	ENSOPRG00000010593	PDCD11	77	92.857	Ochotona_princeps
ENSSARG00000002540	PDCD11	74	84.211	ENSODEG00000008079	PDCD11	80	84.211	Octodon_degus
ENSSARG00000002540	PDCD11	63	67.347	ENSONIG00000018835	pdcd11	76	67.347	Oreochromis_niloticus
ENSSARG00000002540	PDCD11	73	80.769	ENSOANG00000001636	-	74	80.769	Ornithorhynchus_anatinus
ENSSARG00000002540	PDCD11	74	92.857	ENSOCUG00000006312	PDCD11	80	92.857	Oryctolagus_cuniculus
ENSSARG00000002540	PDCD11	67	65.306	ENSORLG00020003642	pdcd11	73	65.306	Oryzias_latipes_hni
ENSSARG00000002540	PDCD11	67	64.706	ENSORLG00015001618	pdcd11	73	64.706	Oryzias_latipes_hsok
ENSSARG00000002540	PDCD11	50	66.667	ENSOMEG00000010904	pdcd11	69	66.667	Oryzias_melastigma
ENSSARG00000002540	PDCD11	71	89.286	ENSOGAG00000008683	PDCD11	77	89.286	Otolemur_garnettii
ENSSARG00000002540	PDCD11	74	90.566	ENSOARG00000003719	PDCD11	80	90.566	Ovis_aries
ENSSARG00000002540	PDCD11	69	91.071	ENSPPAG00000024593	PDCD11	77	91.071	Pan_paniscus
ENSSARG00000002540	PDCD11	74	89.286	ENSPPRG00000015133	PDCD11	80	89.286	Panthera_pardus
ENSSARG00000002540	PDCD11	74	91.071	ENSPTIG00000011433	PDCD11	80	91.071	Panthera_tigris_altaica
ENSSARG00000002540	PDCD11	74	91.071	ENSPTRG00000002911	PDCD11	80	91.071	Pan_troglodytes
ENSSARG00000002540	PDCD11	74	91.071	ENSPANG00000020959	PDCD11	80	91.071	Papio_anubis
ENSSARG00000002540	PDCD11	69	72.340	ENSPKIG00000000973	pdcd11	75	71.154	Paramormyrops_kingsleyae
ENSSARG00000002540	PDCD11	64	55.819	ENSPSIG00000005102	PDCD11	86	55.819	Pelodiscus_sinensis
ENSSARG00000002540	PDCD11	74	89.286	ENSPEMG00000010315	Pdcd11	80	89.286	Peromyscus_maniculatus_bairdii
ENSSARG00000002540	PDCD11	67	65.385	ENSPMAG00000003098	pdcd11	72	65.385	Petromyzon_marinus
ENSSARG00000002540	PDCD11	74	78.571	ENSPCIG00000001118	PDCD11	80	78.571	Phascolarctos_cinereus
ENSSARG00000002540	PDCD11	70	65.306	ENSPFOG00000006012	pdcd11	76	65.306	Poecilia_formosa
ENSSARG00000002540	PDCD11	68	65.306	ENSPLAG00000014494	pdcd11	99	43.197	Poecilia_latipinna
ENSSARG00000002540	PDCD11	59	65.306	ENSPMEG00000018177	pdcd11	75	65.306	Poecilia_mexicana
ENSSARG00000002540	PDCD11	70	63.265	ENSPREG00000000475	pdcd11	80	63.265	Poecilia_reticulata
ENSSARG00000002540	PDCD11	74	91.071	ENSPPYG00000002621	PDCD11	79	91.071	Pongo_abelii
ENSSARG00000002540	PDCD11	52	87.500	ENSPCAG00000011663	PDCD11	53	87.500	Procavia_capensis
ENSSARG00000002540	PDCD11	65	87.500	ENSPCOG00000023327	PDCD11	70	87.500	Propithecus_coquereli
ENSSARG00000002540	PDCD11	71	89.286	ENSPVAG00000004176	PDCD11	77	89.286	Pteropus_vampyrus
ENSSARG00000002540	PDCD11	63	67.347	ENSPNYG00000003979	pdcd11	76	67.347	Pundamilia_nyererei
ENSSARG00000002540	PDCD11	65	72.000	ENSPNAG00000017225	pdcd11	74	72.000	Pygocentrus_nattereri
ENSSARG00000002540	PDCD11	74	89.286	ENSRNOG00000020304	Pdcd11	80	89.286	Rattus_norvegicus
ENSSARG00000002540	PDCD11	74	91.071	ENSRBIG00000011889	PDCD11	80	91.071	Rhinopithecus_bieti
ENSSARG00000002540	PDCD11	74	91.071	ENSRROG00000030483	PDCD11	80	91.071	Rhinopithecus_roxellana
ENSSARG00000002540	PDCD11	53	41.071	YMR229C	-	60	41.071	Saccharomyces_cerevisiae
ENSSARG00000002540	PDCD11	74	90.566	ENSSBOG00000030308	PDCD11	78	90.566	Saimiri_boliviensis_boliviensis
ENSSARG00000002540	PDCD11	71	75.862	ENSSHAG00000018258	PDCD11	77	75.862	Sarcophilus_harrisii
ENSSARG00000002540	PDCD11	67	67.308	ENSSFOG00015003881	pdcd11	80	67.308	Scleropages_formosus
ENSSARG00000002540	PDCD11	70	67.347	ENSSMAG00000006612	pdcd11	80	67.347	Scophthalmus_maximus
ENSSARG00000002540	PDCD11	59	59.259	ENSSDUG00000021302	pdcd11	99	42.809	Seriola_dumerili
ENSSARG00000002540	PDCD11	59	42.105	ENSSPAG00000017558	pdcd11	79	42.105	Stegastes_partitus
ENSSARG00000002540	PDCD11	71	89.286	ENSSSCG00000010599	PDCD11	77	89.286	Sus_scrofa
ENSSARG00000002540	PDCD11	59	44.643	ENSTRUG00000014291	pdcd11	92	44.643	Takifugu_rubripes
ENSSARG00000002540	PDCD11	69	61.538	ENSTNIG00000012085	pdcd11	77	61.538	Tetraodon_nigroviridis
ENSSARG00000002540	PDCD11	69	85.714	ENSTBEG00000001893	PDCD11	75	85.714	Tupaia_belangeri
ENSSARG00000002540	PDCD11	71	89.286	ENSTTRG00000003356	PDCD11	77	89.286	Tursiops_truncatus
ENSSARG00000002540	PDCD11	71	89.286	ENSUAMG00000018015	PDCD11	77	89.286	Ursus_americanus
ENSSARG00000002540	PDCD11	71	89.286	ENSUMAG00000023567	PDCD11	77	89.286	Ursus_maritimus
ENSSARG00000002540	PDCD11	55	83.333	ENSVPAG00000007405	PDCD11	66	83.333	Vicugna_pacos
ENSSARG00000002540	PDCD11	71	91.071	ENSVVUG00000004457	PDCD11	78	91.071	Vulpes_vulpes
ENSSARG00000002540	PDCD11	73	73.585	ENSXETG00000009482	pdcd11	78	73.585	Xenopus_tropicalis
ENSSARG00000002540	PDCD11	65	63.265	ENSXCOG00000012420	pdcd11	76	63.265	Xiphophorus_couchianus
ENSSARG00000002540	PDCD11	70	65.306	ENSXMAG00000004638	pdcd11	76	65.306	Xiphophorus_maculatus