EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000002581 (Gene tree)
Gene ID: -
Gene Symbol: IFIH1
Alias: Hlcd|IDDM19|MDA-5|MDA5
Full Name: interferon induced with helicase C domain 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 126309 bases
Position: chrGeneScaffold_678:233740-360048
Accession: 18873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002336	ResIII	PF04851.15	3.4e-21	1	1
ENSSARP00000002336	RIG-I_C-RD	PF11648.8	4.7e-23	1	1
ENSSARP00000002336	DEAD	PF00270.29	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000002581	IFIH1-201	3066	-	ENSSARP00000002336	1021 (aa)	-	UPI0001582A33

Gene Model

Click here to download ENSSARG00000002581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000002581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000002581	IFIH1	75	86.735	ENSG00000115267	IFIH1	76	86.735	Homo_sapiens
ENSSARG00000002581	IFIH1	65	59.783	ENSAPOG00000024529	ifih1	68	59.783	Acanthochromis_polyacanthus
ENSSARG00000002581	IFIH1	75	85.714	ENSAMEG00000005698	IFIH1	76	85.714	Ailuropoda_melanoleuca
ENSSARG00000002581	IFIH1	74	64.130	ENSACIG00000021179	ifih1	69	64.130	Amphilophus_citrinellus
ENSSARG00000002581	IFIH1	66	59.934	ENSAOCG00000014773	ifih1	68	59.934	Amphiprion_ocellaris
ENSSARG00000002581	IFIH1	66	59.603	ENSAPEG00000018872	ifih1	68	59.603	Amphiprion_percula
ENSSARG00000002581	IFIH1	64	67.391	ENSATEG00000018364	ifih1	65	67.391	Anabas_testudineus
ENSSARG00000002581	IFIH1	75	80.412	ENSAPLG00000010913	IFIH1	71	80.412	Anas_platyrhynchos
ENSSARG00000002581	IFIH1	75	79.381	ENSACAG00000014017	IFIH1	70	79.381	Anolis_carolinensis
ENSSARG00000002581	IFIH1	75	87.755	ENSANAG00000028163	IFIH1	76	87.755	Aotus_nancymaae
ENSSARG00000002581	IFIH1	66	63.043	ENSACLG00000012934	ifih1	67	63.043	Astatotilapia_calliptera
ENSSARG00000002581	IFIH1	73	65.217	ENSAMXG00000010023	ifih1	65	65.217	Astyanax_mexicanus
ENSSARG00000002581	IFIH1	75	90.816	ENSBTAG00000008142	IFIH1	70	90.816	Bos_taurus
ENSSARG00000002581	IFIH1	75	85.714	ENSCJAG00000005956	IFIH1	76	85.714	Callithrix_jacchus
ENSSARG00000002581	IFIH1	75	85.714	ENSCAFG00000010438	IFIH1	75	85.714	Canis_familiaris
ENSSARG00000002581	IFIH1	75	85.714	ENSCAFG00020004329	IFIH1	75	85.714	Canis_lupus_dingo
ENSSARG00000002581	IFIH1	70	90.816	ENSCHIG00000019848	IFIH1	70	90.816	Capra_hircus
ENSSARG00000002581	IFIH1	75	86.735	ENSTSYG00000005900	IFIH1	76	86.735	Carlito_syrichta
ENSSARG00000002581	IFIH1	59	84.694	ENSCAPG00000009502	IFIH1	66	84.694	Cavia_aperea
ENSSARG00000002581	IFIH1	75	84.694	ENSCPOG00000007154	IFIH1	76	84.694	Cavia_porcellus
ENSSARG00000002581	IFIH1	75	87.755	ENSCCAG00000027248	IFIH1	76	87.755	Cebus_capucinus
ENSSARG00000002581	IFIH1	75	87.755	ENSCATG00000032062	IFIH1	76	87.755	Cercocebus_atys
ENSSARG00000002581	IFIH1	75	84.694	ENSCLAG00000008509	IFIH1	76	84.694	Chinchilla_lanigera
ENSSARG00000002581	IFIH1	75	87.755	ENSCSAG00000015614	IFIH1	76	87.755	Chlorocebus_sabaeus
ENSSARG00000002581	IFIH1	50	83.871	ENSCHOG00000013845	IFIH1	54	83.871	Choloepus_hoffmanni
ENSSARG00000002581	IFIH1	74	83.871	ENSCPBG00000026441	IFIH1	76	83.871	Chrysemys_picta_bellii
ENSSARG00000002581	IFIH1	75	87.755	ENSCANG00000031775	IFIH1	76	87.755	Colobus_angolensis_palliatus
ENSSARG00000002581	IFIH1	75	86.735	ENSCGRG00001024740	Ifih1	76	86.735	Cricetulus_griseus_chok1gshd
ENSSARG00000002581	IFIH1	75	86.735	ENSCGRG00000010637	Ifih1	76	86.735	Cricetulus_griseus_crigri
ENSSARG00000002581	IFIH1	64	58.803	ENSCSEG00000010056	ifih1	69	58.824	Cynoglossus_semilaevis
ENSSARG00000002581	IFIH1	64	64.130	ENSCVAG00000002089	ifih1	69	64.130	Cyprinodon_variegatus
ENSSARG00000002581	IFIH1	68	70.652	ENSDARG00000018553	ifih1	70	70.652	Danio_rerio
ENSSARG00000002581	IFIH1	76	86.735	ENSDNOG00000012100	IFIH1	76	86.735	Dasypus_novemcinctus
ENSSARG00000002581	IFIH1	75	83.673	ENSDORG00000001907	Ifih1	73	83.673	Dipodomys_ordii
ENSSARG00000002581	IFIH1	62	88.889	ENSETEG00000011268	IFIH1	62	88.889	Echinops_telfairi
ENSSARG00000002581	IFIH1	67	89.796	ENSEASG00005022976	IFIH1	74	89.796	Equus_asinus_asinus
ENSSARG00000002581	IFIH1	74	89.796	ENSECAG00000007881	IFIH1	74	89.796	Equus_caballus
ENSSARG00000002581	IFIH1	75	82.653	ENSEEUG00000005153	IFIH1	76	82.653	Erinaceus_europaeus
ENSSARG00000002581	IFIH1	67	69.565	ENSELUG00000019690	ifih1	68	69.565	Esox_lucius
ENSSARG00000002581	IFIH1	75	86.735	ENSFCAG00000023951	IFIH1	76	86.735	Felis_catus
ENSSARG00000002581	IFIH1	69	79.381	ENSFALG00000000721	IFIH1	69	79.381	Ficedula_albicollis
ENSSARG00000002581	IFIH1	75	83.673	ENSFDAG00000013122	IFIH1	76	83.673	Fukomys_damarensis
ENSSARG00000002581	IFIH1	66	60.137	ENSFHEG00000022714	ifih1	67	60.137	Fundulus_heteroclitus
ENSSARG00000002581	IFIH1	60	68.478	ENSGMOG00000014790	ifih1	63	67.742	Gadus_morhua
ENSSARG00000002581	IFIH1	75	82.474	ENSGALG00000041192	IFIH1	64	82.474	Gallus_gallus
ENSSARG00000002581	IFIH1	66	60.870	ENSGAFG00000007593	ifih1	70	60.870	Gambusia_affinis
ENSSARG00000002581	IFIH1	64	66.304	ENSGACG00000005518	ifih1	64	66.304	Gasterosteus_aculeatus
ENSSARG00000002581	IFIH1	74	82.796	ENSGAGG00000007126	IFIH1	68	82.796	Gopherus_agassizii
ENSSARG00000002581	IFIH1	75	87.755	ENSGGOG00000015893	IFIH1	76	87.755	Gorilla_gorilla
ENSSARG00000002581	IFIH1	67	63.043	ENSHBUG00000004855	ifih1	69	63.043	Haplochromis_burtoni
ENSSARG00000002581	IFIH1	75	85.714	ENSHGLG00000008772	IFIH1	76	85.714	Heterocephalus_glaber_female
ENSSARG00000002581	IFIH1	75	85.714	ENSHGLG00100002141	IFIH1	76	85.714	Heterocephalus_glaber_male
ENSSARG00000002581	IFIH1	66	61.957	ENSHCOG00000016423	ifih1	69	61.957	Hippocampus_comes
ENSSARG00000002581	IFIH1	67	72.826	ENSIPUG00000013367	ifih1	68	72.826	Ictalurus_punctatus
ENSSARG00000002581	IFIH1	75	84.694	ENSSTOG00000004953	IFIH1	73	84.694	Ictidomys_tridecemlineatus
ENSSARG00000002581	IFIH1	75	82.022	ENSJJAG00000018669	Ifih1	73	82.022	Jaculus_jaculus
ENSSARG00000002581	IFIH1	66	63.043	ENSKMAG00000014309	ifih1	68	63.043	Kryptolebias_marmoratus
ENSSARG00000002581	IFIH1	64	57.609	ENSLBEG00000005389	ifih1	66	57.609	Labrus_bergylta
ENSSARG00000002581	IFIH1	67	79.348	ENSLOCG00000008460	ifih1	70	79.348	Lepisosteus_oculatus
ENSSARG00000002581	IFIH1	75	88.776	ENSLAFG00000009997	IFIH1	77	88.776	Loxodonta_africana
ENSSARG00000002581	IFIH1	75	87.755	ENSMFAG00000003848	IFIH1	76	87.755	Macaca_fascicularis
ENSSARG00000002581	IFIH1	75	87.755	ENSMMUG00000003202	IFIH1	76	87.755	Macaca_mulatta
ENSSARG00000002581	IFIH1	75	87.755	ENSMNEG00000032734	IFIH1	76	87.755	Macaca_nemestrina
ENSSARG00000002581	IFIH1	75	87.755	ENSMLEG00000000107	IFIH1	76	87.755	Mandrillus_leucophaeus
ENSSARG00000002581	IFIH1	74	63.043	ENSMAMG00000003380	ifih1	67	63.043	Mastacembelus_armatus
ENSSARG00000002581	IFIH1	66	63.043	ENSMZEG00005007158	ifih1	68	63.043	Maylandia_zebra
ENSSARG00000002581	IFIH1	75	82.474	ENSMGAG00000010882	IFIH1	77	82.474	Meleagris_gallopavo
ENSSARG00000002581	IFIH1	73	86.735	ENSMICG00000005405	IFIH1	73	86.735	Microcebus_murinus
ENSSARG00000002581	IFIH1	75	86.735	ENSMOCG00000011565	Ifih1	76	86.735	Microtus_ochrogaster
ENSSARG00000002581	IFIH1	65	66.304	ENSMMOG00000003652	ifih1	69	66.304	Mola_mola
ENSSARG00000002581	IFIH1	70	82.653	ENSMODG00000005628	IFIH1	72	82.653	Monodelphis_domestica
ENSSARG00000002581	IFIH1	62	63.043	ENSMALG00000015489	ifih1	65	63.043	Monopterus_albus
ENSSARG00000002581	IFIH1	75	85.567	MGP_CAROLIEiJ_G0023594	Ifih1	75	85.567	Mus_caroli
ENSSARG00000002581	IFIH1	75	85.567	ENSMUSG00000026896	Ifih1	75	85.567	Mus_musculus
ENSSARG00000002581	IFIH1	75	85.567	MGP_PahariEiJ_G0025045	Ifih1	75	85.567	Mus_pahari
ENSSARG00000002581	IFIH1	75	85.567	MGP_SPRETEiJ_G0024516	Ifih1	75	85.567	Mus_spretus
ENSSARG00000002581	IFIH1	75	85.714	ENSMPUG00000000564	IFIH1	75	85.714	Mustela_putorius_furo
ENSSARG00000002581	IFIH1	75	89.796	ENSMLUG00000009505	IFIH1	76	89.796	Myotis_lucifugus
ENSSARG00000002581	IFIH1	75	85.714	ENSNGAG00000012752	Ifih1	75	85.714	Nannospalax_galili
ENSSARG00000002581	IFIH1	67	63.043	ENSNBRG00000014585	ifih1	70	63.043	Neolamprologus_brichardi
ENSSARG00000002581	IFIH1	75	87.755	ENSNLEG00000026782	IFIH1	73	87.755	Nomascus_leucogenys
ENSSARG00000002581	IFIH1	57	78.652	ENSMEUG00000003310	IFIH1	57	78.652	Notamacropus_eugenii
ENSSARG00000002581	IFIH1	71	85.714	ENSOPRG00000015760	IFIH1	66	85.714	Ochotona_princeps
ENSSARG00000002581	IFIH1	75	85.714	ENSODEG00000013586	IFIH1	75	85.714	Octodon_degus
ENSSARG00000002581	IFIH1	65	61.702	ENSONIG00000008901	ifih1	66	61.702	Oreochromis_niloticus
ENSSARG00000002581	IFIH1	67	86.735	ENSOANG00000006194	IFIH1	65	86.735	Ornithorhynchus_anatinus
ENSSARG00000002581	IFIH1	75	84.694	ENSOCUG00000002863	IFIH1	76	84.694	Oryctolagus_cuniculus
ENSSARG00000002581	IFIH1	66	60.870	ENSORLG00000016902	ifih1	66	60.870	Oryzias_latipes
ENSSARG00000002581	IFIH1	66	60.870	ENSORLG00020022369	ifih1	66	60.870	Oryzias_latipes_hni
ENSSARG00000002581	IFIH1	66	60.870	ENSORLG00015017957	ifih1	66	60.870	Oryzias_latipes_hsok
ENSSARG00000002581	IFIH1	64	61.111	ENSOMEG00000002513	ifih1	67	60.870	Oryzias_melastigma
ENSSARG00000002581	IFIH1	75	86.598	ENSOGAG00000012611	IFIH1	75	86.598	Otolemur_garnettii
ENSSARG00000002581	IFIH1	70	90.816	ENSOARG00000006142	IFIH1	70	90.816	Ovis_aries
ENSSARG00000002581	IFIH1	75	87.755	ENSPPAG00000038665	IFIH1	76	87.755	Pan_paniscus
ENSSARG00000002581	IFIH1	75	86.735	ENSPPRG00000024685	IFIH1	76	86.735	Panthera_pardus
ENSSARG00000002581	IFIH1	75	86.735	ENSPTIG00000019898	IFIH1	70	86.735	Panthera_tigris_altaica
ENSSARG00000002581	IFIH1	75	87.755	ENSPTRG00000012582	IFIH1	76	87.755	Pan_troglodytes
ENSSARG00000002581	IFIH1	73	87.755	ENSPANG00000023890	IFIH1	72	87.755	Papio_anubis
ENSSARG00000002581	IFIH1	64	68.478	ENSPKIG00000001054	ifih1	64	68.478	Paramormyrops_kingsleyae
ENSSARG00000002581	IFIH1	75	84.946	ENSPSIG00000007364	IFIH1	76	84.946	Pelodiscus_sinensis
ENSSARG00000002581	IFIH1	65	67.391	ENSPMGG00000006236	ifih1	76	59.933	Periophthalmus_magnuspinnatus
ENSSARG00000002581	IFIH1	75	86.735	ENSPEMG00000014586	Ifih1	76	86.735	Peromyscus_maniculatus_bairdii
ENSSARG00000002581	IFIH1	69	84.946	ENSPCIG00000030338	IFIH1	69	84.946	Phascolarctos_cinereus
ENSSARG00000002581	IFIH1	64	60.702	ENSPFOG00000017223	ifih1	66	60.279	Poecilia_formosa
ENSSARG00000002581	IFIH1	64	60.351	ENSPLAG00000000949	ifih1	66	59.930	Poecilia_latipinna
ENSSARG00000002581	IFIH1	64	60.702	ENSPMEG00000016070	ifih1	66	60.279	Poecilia_mexicana
ENSSARG00000002581	IFIH1	64	60.870	ENSPREG00000007796	ifih1	66	60.870	Poecilia_reticulata
ENSSARG00000002581	IFIH1	75	87.755	ENSPPYG00000012887	IFIH1	75	87.755	Pongo_abelii
ENSSARG00000002581	IFIH1	62	94.000	ENSPCAG00000007680	IFIH1	68	94.000	Procavia_capensis
ENSSARG00000002581	IFIH1	75	86.735	ENSPCOG00000021673	IFIH1	75	86.735	Propithecus_coquereli
ENSSARG00000002581	IFIH1	75	86.735	ENSPVAG00000002643	IFIH1	69	86.735	Pteropus_vampyrus
ENSSARG00000002581	IFIH1	66	63.043	ENSPNYG00000002971	ifih1	68	63.043	Pundamilia_nyererei
ENSSARG00000002581	IFIH1	66	71.739	ENSPNAG00000023802	ifih1	65	71.739	Pygocentrus_nattereri
ENSSARG00000002581	IFIH1	75	85.567	ENSRNOG00000006227	Ifih1	75	85.567	Rattus_norvegicus
ENSSARG00000002581	IFIH1	74	85.714	ENSRBIG00000029188	IFIH1	74	85.714	Rhinopithecus_bieti
ENSSARG00000002581	IFIH1	75	86.735	ENSRROG00000030959	IFIH1	76	86.735	Rhinopithecus_roxellana
ENSSARG00000002581	IFIH1	75	86.735	ENSSBOG00000026205	IFIH1	76	86.735	Saimiri_boliviensis_boliviensis
ENSSARG00000002581	IFIH1	70	84.694	ENSSHAG00000017981	IFIH1	70	84.694	Sarcophilus_harrisii
ENSSARG00000002581	IFIH1	66	74.194	ENSSFOG00015022705	ifih1	72	74.194	Scleropages_formosus
ENSSARG00000002581	IFIH1	64	61.268	ENSSMAG00000012345	ifih1	69	61.268	Scophthalmus_maximus
ENSSARG00000002581	IFIH1	74	65.217	ENSSDUG00000019000	ifih1	65	65.217	Seriola_dumerili
ENSSARG00000002581	IFIH1	74	65.217	ENSSLDG00000016351	ifih1	65	65.217	Seriola_lalandi_dorsalis
ENSSARG00000002581	IFIH1	75	83.505	ENSSPUG00000017377	IFIH1	77	83.505	Sphenodon_punctatus
ENSSARG00000002581	IFIH1	60	60.638	ENSSPAG00000000528	ifih1	68	60.638	Stegastes_partitus
ENSSARG00000002581	IFIH1	76	90.816	ENSSSCG00000015897	IFIH1	73	90.816	Sus_scrofa
ENSSARG00000002581	IFIH1	75	78.351	ENSTGUG00000006914	IFIH1	69	78.351	Taeniopygia_guttata
ENSSARG00000002581	IFIH1	64	61.268	ENSTRUG00000001413	ifih1	67	61.268	Takifugu_rubripes
ENSSARG00000002581	IFIH1	68	57.609	ENSTNIG00000016500	ifih1	69	57.609	Tetraodon_nigroviridis
ENSSARG00000002581	IFIH1	72	89.796	ENSTBEG00000005625	IFIH1	66	89.796	Tupaia_belangeri
ENSSARG00000002581	IFIH1	71	81.250	ENSTTRG00000013780	IFIH1	65	83.686	Tursiops_truncatus
ENSSARG00000002581	IFIH1	75	85.714	ENSUAMG00000015811	IFIH1	76	85.714	Ursus_americanus
ENSSARG00000002581	IFIH1	69	94.000	ENSUMAG00000012031	IFIH1	73	94.000	Ursus_maritimus
ENSSARG00000002581	IFIH1	52	93.750	ENSVPAG00000010823	IFIH1	60	93.750	Vicugna_pacos
ENSSARG00000002581	IFIH1	75	85.714	ENSVVUG00000018569	IFIH1	75	85.714	Vulpes_vulpes
ENSSARG00000002581	IFIH1	67	70.968	ENSXETG00000013176	ifih1	67	70.968	Xenopus_tropicalis
ENSSARG00000002581	IFIH1	64	61.957	ENSXCOG00000019338	ifih1	68	61.957	Xiphophorus_couchianus
ENSSARG00000002581	IFIH1	66	61.957	ENSXMAG00000011536	ifih1	70	61.957	Xiphophorus_maculatus