EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000002892 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 41827 bases
Position: chrGeneScaffold_604:21580-63406
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002691	RRM_4	PF10598.9	1.7e-48	1	1
ENSSARP00000002691	U5_2-snRNA_bdg	PF10597.9	3.1e-74	1	1
ENSSARP00000002691	PRO8NT	PF08082.11	2.7e-87	1	1
ENSSARP00000002691	U6-snRNA_bdg	PF10596.9	7.8e-90	1	1
ENSSARP00000002691	PROCN	PF08083.11	1.9e-147	1	1
ENSSARP00000002691	PRP8_domainIV	PF12134.8	1.6e-130	1	1
ENSSARP00000002691	PROCT	PF08084.11	6.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000002972	PRPF8-201	6999	-	ENSSARP00000002691	2332 (aa)	-	UPI0001582363

Gene Model

Click here to download ENSSARG00000002892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000002892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000002892	PRPF8	87	99.395	ENSG00000174231	PRPF8	87	99.395	Homo_sapiens
ENSSARG00000002892	PRPF8	87	94.626	ENSAPOG00000010079	prpf8	87	94.626	Acanthochromis_polyacanthus
ENSSARG00000002892	PRPF8	87	99.395	ENSAMEG00000007940	PRPF8	87	99.395	Ailuropoda_melanoleuca
ENSSARG00000002892	PRPF8	87	93.058	ENSACIG00000018280	prpf8	87	93.058	Amphilophus_citrinellus
ENSSARG00000002892	PRPF8	87	94.626	ENSAOCG00000010725	prpf8	87	94.626	Amphiprion_ocellaris
ENSSARG00000002892	PRPF8	87	94.626	ENSAPEG00000014397	prpf8	87	94.626	Amphiprion_percula
ENSSARG00000002892	PRPF8	87	94.691	ENSATEG00000010062	prpf8	87	94.691	Anabas_testudineus
ENSSARG00000002892	PRPF8	83	98.084	ENSAPLG00000010357	PRPF8	87	98.084	Anas_platyrhynchos
ENSSARG00000002892	PRPF8	70	96.842	ENSACAG00000014784	PRPF8	85	96.842	Anolis_carolinensis
ENSSARG00000002892	PRPF8	87	99.395	ENSANAG00000032629	PRPF8	87	99.395	Aotus_nancymaae
ENSSARG00000002892	PRPF8	86	96.178	ENSACLG00000020858	prpf8	87	96.178	Astatotilapia_calliptera
ENSSARG00000002892	PRPF8	87	94.411	ENSAMXG00000020291	prpf8	87	94.411	Astyanax_mexicanus
ENSSARG00000002892	PRPF8	87	99.395	ENSBTAG00000011488	PRPF8	87	99.395	Bos_taurus
ENSSARG00000002892	PRPF8	87	83.974	WBGene00004187	prp-8	87	83.974	Caenorhabditis_elegans
ENSSARG00000002892	PRPF8	87	99.395	ENSCJAG00000001911	PRPF8	87	99.395	Callithrix_jacchus
ENSSARG00000002892	PRPF8	87	99.395	ENSCAFG00000019221	PRPF8	87	99.395	Canis_familiaris
ENSSARG00000002892	PRPF8	83	99.295	ENSCAFG00020009943	PRPF8	87	99.295	Canis_lupus_dingo
ENSSARG00000002892	PRPF8	87	99.395	ENSCHIG00000017499	PRPF8	87	99.395	Capra_hircus
ENSSARG00000002892	PRPF8	87	99.395	ENSTSYG00000014120	PRPF8	87	99.395	Carlito_syrichta
ENSSARG00000002892	PRPF8	83	99.299	ENSCAPG00000009459	PRPF8	86	99.299	Cavia_aperea
ENSSARG00000002892	PRPF8	87	99.395	ENSCPOG00000010379	PRPF8	87	99.395	Cavia_porcellus
ENSSARG00000002892	PRPF8	87	99.395	ENSCCAG00000031983	-	87	99.395	Cebus_capucinus
ENSSARG00000002892	PRPF8	87	99.395	ENSCATG00000038595	PRPF8	87	99.395	Cercocebus_atys
ENSSARG00000002892	PRPF8	87	99.395	ENSCLAG00000004388	PRPF8	87	99.395	Chinchilla_lanigera
ENSSARG00000002892	PRPF8	87	99.395	ENSCSAG00000013929	PRPF8	87	99.395	Chlorocebus_sabaeus
ENSSARG00000002892	PRPF8	67	100.000	ENSCHOG00000008590	PRPF8	73	100.000	Choloepus_hoffmanni
ENSSARG00000002892	PRPF8	87	98.336	ENSCPBG00000020409	PRPF8	87	98.336	Chrysemys_picta_bellii
ENSSARG00000002892	PRPF8	86	92.901	ENSCSAVG00000007825	-	84	92.901	Ciona_savignyi
ENSSARG00000002892	PRPF8	87	99.395	ENSCANG00000043088	PRPF8	87	99.395	Colobus_angolensis_palliatus
ENSSARG00000002892	PRPF8	59	99.409	ENSCGRG00000005129	Prpf8	80	99.409	Cricetulus_griseus_crigri
ENSSARG00000002892	PRPF8	87	94.408	ENSCSEG00000007905	prpf8	87	94.408	Cynoglossus_semilaevis
ENSSARG00000002892	PRPF8	87	94.336	ENSDARG00000026180	prpf8	87	94.336	Danio_rerio
ENSSARG00000002892	PRPF8	78	99.914	ENSDNOG00000018471	PRPF8	83	99.914	Dasypus_novemcinctus
ENSSARG00000002892	PRPF8	65	100.000	ENSDORG00000006185	Prpf8	78	100.000	Dipodomys_ordii
ENSSARG00000002892	PRPF8	87	89.623	FBgn0033688	Prp8	86	89.623	Drosophila_melanogaster
ENSSARG00000002892	PRPF8	83	98.197	ENSETEG00000017592	PRPF8	83	98.197	Echinops_telfairi
ENSSARG00000002892	PRPF8	87	90.826	ENSEBUG00000006548	prpf8	87	90.826	Eptatretus_burgeri
ENSSARG00000002892	PRPF8	87	99.395	ENSEASG00005009514	PRPF8	87	100.000	Equus_asinus_asinus
ENSSARG00000002892	PRPF8	85	99.334	ENSECAG00000021318	PRPF8	87	99.334	Equus_caballus
ENSSARG00000002892	PRPF8	63	100.000	ENSEEUG00000012120	-	63	100.000	Erinaceus_europaeus
ENSSARG00000002892	PRPF8	85	94.277	ENSELUG00000007120	prpf8	86	94.277	Esox_lucius
ENSSARG00000002892	PRPF8	87	99.395	ENSFCAG00000006297	PRPF8	87	99.395	Felis_catus
ENSSARG00000002892	PRPF8	87	98.033	ENSFALG00000006628	PRPF8	87	98.033	Ficedula_albicollis
ENSSARG00000002892	PRPF8	87	99.395	ENSFDAG00000004711	PRPF8	87	99.395	Fukomys_damarensis
ENSSARG00000002892	PRPF8	87	94.263	ENSFHEG00000021084	prpf8	87	94.263	Fundulus_heteroclitus
ENSSARG00000002892	PRPF8	87	93.524	ENSGMOG00000002028	prpf8	87	93.524	Gadus_morhua
ENSSARG00000002892	PRPF8	87	97.882	ENSGALG00000002943	PRPF8	87	97.882	Gallus_gallus
ENSSARG00000002892	PRPF8	87	94.336	ENSGAFG00000010337	prpf8	87	94.336	Gambusia_affinis
ENSSARG00000002892	PRPF8	87	94.481	ENSGACG00000008504	prpf8	87	94.481	Gasterosteus_aculeatus
ENSSARG00000002892	PRPF8	87	98.336	ENSGAGG00000008350	PRPF8	87	98.336	Gopherus_agassizii
ENSSARG00000002892	PRPF8	87	99.395	ENSGGOG00000005516	PRPF8	87	99.395	Gorilla_gorilla
ENSSARG00000002892	PRPF8	87	94.553	ENSHBUG00000016192	prpf8	87	94.553	Haplochromis_burtoni
ENSSARG00000002892	PRPF8	87	99.395	ENSHGLG00000012029	PRPF8	87	99.395	Heterocephalus_glaber_female
ENSSARG00000002892	PRPF8	87	99.395	ENSHGLG00100016494	PRPF8	87	99.395	Heterocephalus_glaber_male
ENSSARG00000002892	PRPF8	87	94.408	ENSHCOG00000016414	prpf8	87	94.408	Hippocampus_comes
ENSSARG00000002892	PRPF8	87	94.481	ENSIPUG00000023230	prpf8	87	94.481	Ictalurus_punctatus
ENSSARG00000002892	PRPF8	87	99.395	ENSSTOG00000005128	PRPF8	87	99.395	Ictidomys_tridecemlineatus
ENSSARG00000002892	PRPF8	87	99.395	ENSJJAG00000021159	Prpf8	87	99.395	Jaculus_jaculus
ENSSARG00000002892	PRPF8	87	95.378	ENSKMAG00000016118	prpf8	87	95.378	Kryptolebias_marmoratus
ENSSARG00000002892	PRPF8	87	94.408	ENSLBEG00000026903	prpf8	87	94.408	Labrus_bergylta
ENSSARG00000002892	PRPF8	82	94.193	ENSLACG00000010479	PRPF8	86	95.534	Latimeria_chalumnae
ENSSARG00000002892	PRPF8	87	94.412	ENSLOCG00000005409	prpf8	87	94.412	Lepisosteus_oculatus
ENSSARG00000002892	PRPF8	87	99.395	ENSLAFG00000015445	PRPF8	87	99.395	Loxodonta_africana
ENSSARG00000002892	PRPF8	87	99.395	ENSMFAG00000039995	PRPF8	87	99.395	Macaca_fascicularis
ENSSARG00000002892	PRPF8	87	99.395	ENSMMUG00000004820	PRPF8	87	99.395	Macaca_mulatta
ENSSARG00000002892	PRPF8	87	99.395	ENSMNEG00000035713	PRPF8	87	99.395	Macaca_nemestrina
ENSSARG00000002892	PRPF8	87	99.395	ENSMLEG00000037937	PRPF8	87	99.395	Mandrillus_leucophaeus
ENSSARG00000002892	PRPF8	87	94.553	ENSMAMG00000008919	prpf8	87	94.553	Mastacembelus_armatus
ENSSARG00000002892	PRPF8	87	94.553	ENSMZEG00005015073	prpf8	87	94.553	Maylandia_zebra
ENSSARG00000002892	PRPF8	87	97.882	ENSMGAG00000004769	PRPF8	87	97.882	Meleagris_gallopavo
ENSSARG00000002892	PRPF8	87	99.395	ENSMICG00000010320	PRPF8	87	99.395	Microcebus_murinus
ENSSARG00000002892	PRPF8	87	99.395	ENSMOCG00000016838	Prpf8	87	99.395	Microtus_ochrogaster
ENSSARG00000002892	PRPF8	87	94.553	ENSMMOG00000011887	prpf8	87	94.553	Mola_mola
ENSSARG00000002892	PRPF8	87	99.244	ENSMODG00000010480	PRPF8	87	99.244	Monodelphis_domestica
ENSSARG00000002892	PRPF8	84	94.277	ENSMALG00000003558	prpf8	87	94.277	Monopterus_albus
ENSSARG00000002892	PRPF8	87	99.395	MGP_CAROLIEiJ_G0016740	Prpf8	87	99.395	Mus_caroli
ENSSARG00000002892	PRPF8	87	99.395	ENSMUSG00000020850	Prpf8	87	99.395	Mus_musculus
ENSSARG00000002892	PRPF8	87	99.244	MGP_PahariEiJ_G0017877	Prpf8	87	99.244	Mus_pahari
ENSSARG00000002892	PRPF8	87	99.395	MGP_SPRETEiJ_G0017583	Prpf8	87	99.395	Mus_spretus
ENSSARG00000002892	PRPF8	87	99.395	ENSMPUG00000013227	PRPF8	87	99.395	Mustela_putorius_furo
ENSSARG00000002892	PRPF8	87	99.244	ENSMLUG00000002666	PRPF8	87	99.244	Myotis_lucifugus
ENSSARG00000002892	PRPF8	87	99.395	ENSNGAG00000005305	Prpf8	87	99.395	Nannospalax_galili
ENSSARG00000002892	PRPF8	87	94.553	ENSNBRG00000013127	prpf8	87	94.553	Neolamprologus_brichardi
ENSSARG00000002892	PRPF8	87	94.251	ENSNLEG00000000897	PRPF8	88	94.251	Nomascus_leucogenys
ENSSARG00000002892	PRPF8	86	99.362	ENSMEUG00000015999	PRPF8	87	99.362	Notamacropus_eugenii
ENSSARG00000002892	PRPF8	87	95.570	ENSOPRG00000003102	PRPF8	87	95.570	Ochotona_princeps
ENSSARG00000002892	PRPF8	87	99.395	ENSODEG00000008468	PRPF8	87	99.395	Octodon_degus
ENSSARG00000002892	PRPF8	87	94.626	ENSONIG00000008153	prpf8	87	94.626	Oreochromis_niloticus
ENSSARG00000002892	PRPF8	69	99.012	ENSOANG00000004250	PRPF8	82	99.012	Ornithorhynchus_anatinus
ENSSARG00000002892	PRPF8	87	99.395	ENSOCUG00000000081	PRPF8	87	99.395	Oryctolagus_cuniculus
ENSSARG00000002892	PRPF8	87	94.408	ENSORLG00000008036	prpf8	87	94.408	Oryzias_latipes
ENSSARG00000002892	PRPF8	87	94.402	ENSORLG00020021070	prpf8	87	94.402	Oryzias_latipes_hni
ENSSARG00000002892	PRPF8	87	94.408	ENSORLG00015002340	prpf8	87	94.408	Oryzias_latipes_hsok
ENSSARG00000002892	PRPF8	84	96.970	ENSOMEG00000016866	prpf8	85	96.970	Oryzias_melastigma
ENSSARG00000002892	PRPF8	87	99.395	ENSOARG00000013312	PRPF8	87	99.395	Ovis_aries
ENSSARG00000002892	PRPF8	87	99.395	ENSPPAG00000042753	PRPF8	87	99.395	Pan_paniscus
ENSSARG00000002892	PRPF8	87	99.395	ENSPPRG00000008746	PRPF8	87	99.395	Panthera_pardus
ENSSARG00000002892	PRPF8	87	99.395	ENSPTIG00000019200	PRPF8	87	99.395	Panthera_tigris_altaica
ENSSARG00000002892	PRPF8	87	99.395	ENSPTRG00000039576	PRPF8	87	99.395	Pan_troglodytes
ENSSARG00000002892	PRPF8	87	96.049	ENSPANG00000024607	PRPF8	87	96.049	Papio_anubis
ENSSARG00000002892	PRPF8	87	94.626	ENSPKIG00000011201	prpf8	87	94.626	Paramormyrops_kingsleyae
ENSSARG00000002892	PRPF8	87	98.336	ENSPSIG00000013393	PRPF8	87	98.336	Pelodiscus_sinensis
ENSSARG00000002892	PRPF8	87	99.395	ENSPEMG00000021699	Prpf8	87	99.395	Peromyscus_maniculatus_bairdii
ENSSARG00000002892	PRPF8	83	91.794	ENSPMAG00000005438	prpf8	87	91.794	Petromyzon_marinus
ENSSARG00000002892	PRPF8	87	99.244	ENSPCIG00000022603	PRPF8	87	99.295	Phascolarctos_cinereus
ENSSARG00000002892	PRPF8	87	94.336	ENSPFOG00000007005	prpf8	87	94.336	Poecilia_formosa
ENSSARG00000002892	PRPF8	87	94.336	ENSPLAG00000020777	prpf8	87	94.336	Poecilia_latipinna
ENSSARG00000002892	PRPF8	87	94.336	ENSPMEG00000004051	prpf8	87	94.336	Poecilia_mexicana
ENSSARG00000002892	PRPF8	87	94.554	ENSPREG00000021902	prpf8	87	94.554	Poecilia_reticulata
ENSSARG00000002892	PRPF8	87	99.395	ENSPPYG00000007777	PRPF8	87	99.395	Pongo_abelii
ENSSARG00000002892	PRPF8	82	99.244	ENSPCAG00000008938	PRPF8	82	99.244	Procavia_capensis
ENSSARG00000002892	PRPF8	87	99.395	ENSPCOG00000015182	PRPF8	87	99.395	Propithecus_coquereli
ENSSARG00000002892	PRPF8	78	100.000	ENSPVAG00000002134	PRPF8	78	100.000	Pteropus_vampyrus
ENSSARG00000002892	PRPF8	87	94.553	ENSPNYG00000016356	prpf8	87	94.553	Pundamilia_nyererei
ENSSARG00000002892	PRPF8	87	94.408	ENSPNAG00000009247	prpf8	87	94.408	Pygocentrus_nattereri
ENSSARG00000002892	PRPF8	87	99.395	ENSRNOG00000003495	Prpf8	87	99.395	Rattus_norvegicus
ENSSARG00000002892	PRPF8	87	99.395	ENSRBIG00000031219	PRPF8	87	99.395	Rhinopithecus_bieti
ENSSARG00000002892	PRPF8	87	99.395	ENSRROG00000038014	PRPF8	87	99.395	Rhinopithecus_roxellana
ENSSARG00000002892	PRPF8	83	67.406	YHR165C	PRP8	80	67.406	Saccharomyces_cerevisiae
ENSSARG00000002892	PRPF8	87	99.395	ENSSBOG00000029717	PRPF8	87	99.395	Saimiri_boliviensis_boliviensis
ENSSARG00000002892	PRPF8	87	99.244	ENSSHAG00000006167	PRPF8	87	99.244	Sarcophilus_harrisii
ENSSARG00000002892	PRPF8	87	94.553	ENSSFOG00015013905	prpf8	87	94.553	Scleropages_formosus
ENSSARG00000002892	PRPF8	87	94.553	ENSSMAG00000017736	prpf8	87	94.553	Scophthalmus_maximus
ENSSARG00000002892	PRPF8	87	94.626	ENSSDUG00000003029	prpf8	87	94.626	Seriola_dumerili
ENSSARG00000002892	PRPF8	59	94.626	ENSSLDG00000017096	prpf8	86	94.626	Seriola_lalandi_dorsalis
ENSSARG00000002892	PRPF8	87	97.731	ENSSPUG00000007463	PRPF8	87	97.731	Sphenodon_punctatus
ENSSARG00000002892	PRPF8	87	94.436	ENSSPAG00000015639	prpf8	87	94.436	Stegastes_partitus
ENSSARG00000002892	PRPF8	87	99.395	ENSSSCG00000017817	PRPF8	87	99.395	Sus_scrofa
ENSSARG00000002892	PRPF8	87	98.033	ENSTGUG00000005648	-	87	98.033	Taeniopygia_guttata
ENSSARG00000002892	PRPF8	87	94.336	ENSTRUG00000015906	prpf8	87	94.336	Takifugu_rubripes
ENSSARG00000002892	PRPF8	82	94.408	ENSTNIG00000003460	prpf8	86	94.408	Tetraodon_nigroviridis
ENSSARG00000002892	PRPF8	77	100.000	ENSTBEG00000006431	PRPF8	77	100.000	Tupaia_belangeri
ENSSARG00000002892	PRPF8	87	99.092	ENSTTRG00000006869	PRPF8	87	99.092	Tursiops_truncatus
ENSSARG00000002892	PRPF8	87	98.487	ENSUMAG00000009385	PRPF8	87	98.487	Ursus_maritimus
ENSSARG00000002892	PRPF8	64	99.310	ENSVPAG00000006063	-	64	99.310	Vicugna_pacos
ENSSARG00000002892	PRPF8	87	99.395	ENSVVUG00000021695	PRPF8	86	99.395	Vulpes_vulpes
ENSSARG00000002892	PRPF8	87	96.823	ENSXETG00000022259	prpf8	87	96.823	Xenopus_tropicalis
ENSSARG00000002892	PRPF8	87	94.336	ENSXCOG00000012775	prpf8	87	94.336	Xiphophorus_couchianus
ENSSARG00000002892	PRPF8	87	94.263	ENSXMAG00000008505	prpf8	87	94.263	Xiphophorus_maculatus