EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000003016 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 206875 bases
Position: chrGeneScaffold_626:4807-211681
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002843	TUDOR	PF00567.24	6.6e-64	1	5
ENSSARP00000002843	TUDOR	PF00567.24	6.6e-64	2	5
ENSSARP00000002843	TUDOR	PF00567.24	6.6e-64	3	5
ENSSARP00000002843	TUDOR	PF00567.24	6.6e-64	4	5
ENSSARP00000002843	TUDOR	PF00567.24	6.6e-64	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003140	RNF17-201	4998	-	ENSSARP00000002843	1665 (aa)	-	UPI00015824C5

Gene Model

Click here to download ENSSARG00000003016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003016	RNF17	94	71.429	ENSG00000132972	RNF17	100	71.429	Homo_sapiens
ENSSARG00000003016	RNF17	57	33.333	ENSAPOG00000017034	rnf17	74	33.333	Acanthochromis_polyacanthus
ENSSARG00000003016	RNF17	94	75.314	ENSAMEG00000017340	RNF17	100	75.657	Ailuropoda_melanoleuca
ENSSARG00000003016	RNF17	63	35.077	ENSAOCG00000018283	rnf17	80	35.077	Amphiprion_ocellaris
ENSSARG00000003016	RNF17	63	33.922	ENSAPEG00000022338	rnf17	79	33.922	Amphiprion_percula
ENSSARG00000003016	RNF17	60	34.906	ENSATEG00000002067	rnf17	73	34.906	Anabas_testudineus
ENSSARG00000003016	RNF17	69	54.514	ENSAPLG00000003969	RNF17	83	54.514	Anas_platyrhynchos
ENSSARG00000003016	RNF17	74	49.477	ENSACAG00000001418	RNF17	81	47.181	Anolis_carolinensis
ENSSARG00000003016	RNF17	75	70.404	ENSANAG00000029969	RNF17	88	69.869	Aotus_nancymaae
ENSSARG00000003016	RNF17	63	34.234	ENSACLG00000018279	rnf17	70	34.234	Astatotilapia_calliptera
ENSSARG00000003016	RNF17	62	35.165	ENSAMXG00000011002	rnf17	70	35.165	Astyanax_mexicanus
ENSSARG00000003016	RNF17	94	70.400	ENSCJAG00000018937	RNF17	100	70.400	Callithrix_jacchus
ENSSARG00000003016	RNF17	92	75.534	ENSCAFG00000007418	RNF17	100	75.621	Canis_familiaris
ENSSARG00000003016	RNF17	84	73.829	ENSCHIG00000026716	RNF17	98	73.829	Capra_hircus
ENSSARG00000003016	RNF17	89	68.457	ENSTSYG00000000365	RNF17	98	68.457	Carlito_syrichta
ENSSARG00000003016	RNF17	62	72.648	ENSCAPG00000012908	RNF17	80	72.648	Cavia_aperea
ENSSARG00000003016	RNF17	94	71.314	ENSCCAG00000026725	RNF17	99	71.314	Cebus_capucinus
ENSSARG00000003016	RNF17	94	71.314	ENSCATG00000040352	RNF17	100	71.314	Cercocebus_atys
ENSSARG00000003016	RNF17	94	72.082	ENSCLAG00000004127	RNF17	100	72.082	Chinchilla_lanigera
ENSSARG00000003016	RNF17	94	70.400	ENSCSAG00000018019	RNF17	100	71.314	Chlorocebus_sabaeus
ENSSARG00000003016	RNF17	70	78.390	ENSCHOG00000013310	RNF17	71	78.814	Choloepus_hoffmanni
ENSSARG00000003016	RNF17	79	59.494	ENSCPBG00000020920	RNF17	90	59.494	Chrysemys_picta_bellii
ENSSARG00000003016	RNF17	94	71.167	ENSCANG00000032927	RNF17	99	71.167	Colobus_angolensis_palliatus
ENSSARG00000003016	RNF17	94	71.005	ENSCGRG00001022658	Rnf17	100	71.005	Cricetulus_griseus_chok1gshd
ENSSARG00000003016	RNF17	94	71.005	ENSCGRG00000009924	Rnf17	100	71.005	Cricetulus_griseus_crigri
ENSSARG00000003016	RNF17	54	37.063	ENSCSEG00000008626	rnf17	68	37.063	Cynoglossus_semilaevis
ENSSARG00000003016	RNF17	57	33.333	ENSCVAG00000017008	rnf17	78	33.333	Cyprinodon_variegatus
ENSSARG00000003016	RNF17	62	35.127	ENSDARG00000056387	rnf17	69	35.127	Danio_rerio
ENSSARG00000003016	RNF17	94	75.744	ENSDNOG00000006115	RNF17	98	75.744	Dasypus_novemcinctus
ENSSARG00000003016	RNF17	60	80.769	ENSETEG00000017874	-	61	80.769	Echinops_telfairi
ENSSARG00000003016	RNF17	94	76.773	ENSECAG00000017152	RNF17	99	76.773	Equus_caballus
ENSSARG00000003016	RNF17	74	75.704	ENSEEUG00000000332	RNF17	83	75.704	Erinaceus_europaeus
ENSSARG00000003016	RNF17	64	36.222	ENSELUG00000005626	rnf17	69	36.222	Esox_lucius
ENSSARG00000003016	RNF17	94	75.172	ENSFCAG00000004914	RNF17	100	75.515	Felis_catus
ENSSARG00000003016	RNF17	76	54.397	ENSFALG00000008766	RNF17	86	54.397	Ficedula_albicollis
ENSSARG00000003016	RNF17	94	71.233	ENSFDAG00000017857	RNF17	100	71.233	Fukomys_damarensis
ENSSARG00000003016	RNF17	63	34.146	ENSFHEG00000014822	rnf17	74	33.537	Fundulus_heteroclitus
ENSSARG00000003016	RNF17	58	37.931	ENSGAFG00000004463	rnf17	79	37.931	Gambusia_affinis
ENSSARG00000003016	RNF17	74	62.658	ENSGAGG00000016999	RNF17	82	62.658	Gopherus_agassizii
ENSSARG00000003016	RNF17	94	71.429	ENSGGOG00000014491	RNF17	100	71.429	Gorilla_gorilla
ENSSARG00000003016	RNF17	63	34.234	ENSHBUG00000003554	rnf17	70	34.234	Haplochromis_burtoni
ENSSARG00000003016	RNF17	94	72.146	ENSHGLG00000007270	RNF17	100	72.146	Heterocephalus_glaber_female
ENSSARG00000003016	RNF17	94	72.146	ENSHGLG00100017393	RNF17	100	72.146	Heterocephalus_glaber_male
ENSSARG00000003016	RNF17	50	40.580	ENSHCOG00000017676	rnf17	70	40.580	Hippocampus_comes
ENSSARG00000003016	RNF17	62	34.752	ENSIPUG00000001087	rnf17	71	34.752	Ictalurus_punctatus
ENSSARG00000003016	RNF17	94	71.347	ENSJJAG00000016584	Rnf17	100	71.347	Jaculus_jaculus
ENSSARG00000003016	RNF17	62	33.929	ENSKMAG00000013403	rnf17	66	33.929	Kryptolebias_marmoratus
ENSSARG00000003016	RNF17	57	35.357	ENSLBEG00000014910	rnf17	65	35.357	Labrus_bergylta
ENSSARG00000003016	RNF17	66	50.313	ENSLACG00000000323	RNF17	90	50.313	Latimeria_chalumnae
ENSSARG00000003016	RNF17	67	32.941	ENSLOCG00000010768	rnf17	66	41.350	Lepisosteus_oculatus
ENSSARG00000003016	RNF17	94	71.543	ENSMFAG00000032388	RNF17	100	71.543	Macaca_fascicularis
ENSSARG00000003016	RNF17	94	71.657	ENSMMUG00000014610	RNF17	100	71.657	Macaca_mulatta
ENSSARG00000003016	RNF17	94	71.429	ENSMNEG00000011234	RNF17	100	71.429	Macaca_nemestrina
ENSSARG00000003016	RNF17	94	70.971	ENSMLEG00000030227	RNF17	100	70.971	Mandrillus_leucophaeus
ENSSARG00000003016	RNF17	62	32.857	ENSMAMG00000020403	rnf17	80	32.857	Mastacembelus_armatus
ENSSARG00000003016	RNF17	63	34.535	ENSMZEG00005019166	rnf17	70	34.535	Maylandia_zebra
ENSSARG00000003016	RNF17	64	55.439	ENSMGAG00000015138	RNF17	90	55.439	Meleagris_gallopavo
ENSSARG00000003016	RNF17	94	66.324	ENSMAUG00000004788	Rnf17	99	66.667	Mesocricetus_auratus
ENSSARG00000003016	RNF17	94	74.256	ENSMICG00000010364	RNF17	98	74.256	Microcebus_murinus
ENSSARG00000003016	RNF17	52	69.108	ENSMOCG00000011818	-	100	69.108	Microtus_ochrogaster
ENSSARG00000003016	RNF17	55	41.727	ENSMMOG00000019514	rnf17	77	41.727	Mola_mola
ENSSARG00000003016	RNF17	93	63.272	ENSMODG00000007827	RNF17	99	63.616	Monodelphis_domestica
ENSSARG00000003016	RNF17	56	34.906	ENSMALG00000016943	rnf17	75	34.906	Monopterus_albus
ENSSARG00000003016	RNF17	94	70.252	MGP_CAROLIEiJ_G0019337	Rnf17	100	70.252	Mus_caroli
ENSSARG00000003016	RNF17	94	69.908	ENSMUSG00000000365	Rnf17	100	69.908	Mus_musculus
ENSSARG00000003016	RNF17	94	69.863	MGP_PahariEiJ_G0030355	Rnf17	100	69.863	Mus_pahari
ENSSARG00000003016	RNF17	94	70.023	MGP_SPRETEiJ_G0020228	Rnf17	100	70.023	Mus_spretus
ENSSARG00000003016	RNF17	94	76.087	ENSMPUG00000013305	RNF17	100	76.430	Mustela_putorius_furo
ENSSARG00000003016	RNF17	94	76.087	ENSMLUG00000003903	RNF17	100	76.430	Myotis_lucifugus
ENSSARG00000003016	RNF17	94	70.957	ENSNGAG00000013553	Rnf17	100	70.957	Nannospalax_galili
ENSSARG00000003016	RNF17	62	33.488	ENSNBRG00000012006	rnf17	78	33.488	Neolamprologus_brichardi
ENSSARG00000003016	RNF17	94	70.971	ENSNLEG00000013780	RNF17	100	70.971	Nomascus_leucogenys
ENSSARG00000003016	RNF17	54	62.154	ENSMEUG00000003276	-	54	63.077	Notamacropus_eugenii
ENSSARG00000003016	RNF17	82	65.979	ENSOPRG00000016743	-	86	65.979	Ochotona_princeps
ENSSARG00000003016	RNF17	62	34.234	ENSONIG00000015746	rnf17	86	33.728	Oreochromis_niloticus
ENSSARG00000003016	RNF17	94	73.799	ENSOCUG00000007384	RNF17	100	73.799	Oryctolagus_cuniculus
ENSSARG00000003016	RNF17	62	34.043	ENSORLG00000012818	rnf17	77	34.043	Oryzias_latipes
ENSSARG00000003016	RNF17	62	33.333	ENSORLG00020009879	-	68	33.735	Oryzias_latipes_hni
ENSSARG00000003016	RNF17	62	33.636	ENSORLG00015013027	-	68	34.242	Oryzias_latipes_hsok
ENSSARG00000003016	RNF17	56	32.143	ENSOMEG00000009891	rnf17	85	32.281	Oryzias_melastigma
ENSSARG00000003016	RNF17	91	75.389	ENSOGAG00000014803	RNF17	96	76.166	Otolemur_garnettii
ENSSARG00000003016	RNF17	89	73.829	ENSOARG00000014641	RNF17	97	73.829	Ovis_aries
ENSSARG00000003016	RNF17	87	71.543	ENSPPAG00000028779	RNF17	100	71.543	Pan_paniscus
ENSSARG00000003016	RNF17	94	75.057	ENSPPRG00000009230	RNF17	100	75.400	Panthera_pardus
ENSSARG00000003016	RNF17	94	75.172	ENSPTIG00000001738	RNF17	100	75.515	Panthera_tigris_altaica
ENSSARG00000003016	RNF17	94	71.429	ENSPTRG00000005713	RNF17	100	71.429	Pan_troglodytes
ENSSARG00000003016	RNF17	94	71.771	ENSPANG00000007640	RNF17	100	71.771	Papio_anubis
ENSSARG00000003016	RNF17	63	37.895	ENSPKIG00000001648	rnf17	84	37.895	Paramormyrops_kingsleyae
ENSSARG00000003016	RNF17	64	63.732	ENSPSIG00000011245	RNF17	93	64.437	Pelodiscus_sinensis
ENSSARG00000003016	RNF17	94	71.005	ENSPEMG00000008693	Rnf17	100	71.005	Peromyscus_maniculatus_bairdii
ENSSARG00000003016	RNF17	59	68.936	ENSPCIG00000009190	-	93	68.936	Phascolarctos_cinereus
ENSSARG00000003016	RNF17	65	32.965	ENSPFOG00000007124	rnf17	68	32.965	Poecilia_formosa
ENSSARG00000003016	RNF17	68	33.038	ENSPLAG00000006198	rnf17	77	33.038	Poecilia_latipinna
ENSSARG00000003016	RNF17	68	33.259	ENSPMEG00000022432	rnf17	77	33.544	Poecilia_mexicana
ENSSARG00000003016	RNF17	57	44.203	ENSPREG00000001414	rnf17	74	44.203	Poecilia_reticulata
ENSSARG00000003016	RNF17	94	71.200	ENSPPYG00000005215	RNF17	100	71.200	Pongo_abelii
ENSSARG00000003016	RNF17	60	83.193	ENSPCAG00000002665	RNF17	62	83.193	Procavia_capensis
ENSSARG00000003016	RNF17	75	69.792	ENSPCOG00000020211	RNF17	97	82.022	Propithecus_coquereli
ENSSARG00000003016	RNF17	89	76.056	ENSPVAG00000013021	RNF17	89	76.901	Pteropus_vampyrus
ENSSARG00000003016	RNF17	63	35.000	ENSPNAG00000027505	rnf17	79	35.000	Pygocentrus_nattereri
ENSSARG00000003016	RNF17	94	69.451	ENSRNOG00000008059	Rnf17	98	69.451	Rattus_norvegicus
ENSSARG00000003016	RNF17	94	68.114	ENSRBIG00000027010	RNF17	98	68.966	Rhinopithecus_bieti
ENSSARG00000003016	RNF17	94	71.429	ENSRROG00000022801	RNF17	98	71.429	Rhinopithecus_roxellana
ENSSARG00000003016	RNF17	93	70.514	ENSSBOG00000021661	RNF17	98	70.514	Saimiri_boliviensis_boliviensis
ENSSARG00000003016	RNF17	89	62.586	ENSSHAG00000005609	RNF17	96	62.929	Sarcophilus_harrisii
ENSSARG00000003016	RNF17	62	39.863	ENSSFOG00015023037	rnf17	83	39.863	Scleropages_formosus
ENSSARG00000003016	RNF17	60	34.643	ENSSMAG00000007429	rnf17	66	34.643	Scophthalmus_maximus
ENSSARG00000003016	RNF17	60	35.106	ENSSDUG00000013530	rnf17	69	35.106	Seriola_dumerili
ENSSARG00000003016	RNF17	57	34.397	ENSSLDG00000019577	rnf17	67	34.397	Seriola_lalandi_dorsalis
ENSSARG00000003016	RNF17	72	61.783	ENSSPUG00000008917	RNF17	86	61.783	Sphenodon_punctatus
ENSSARG00000003016	RNF17	56	32.979	ENSSPAG00000001925	rnf17	75	32.979	Stegastes_partitus
ENSSARG00000003016	RNF17	83	72.998	ENSSSCG00000009572	RNF17	100	72.998	Sus_scrofa
ENSSARG00000003016	RNF17	62	33.452	ENSTRUG00000015498	rnf17	70	33.452	Takifugu_rubripes
ENSSARG00000003016	RNF17	62	33.962	ENSTNIG00000015681	rnf17	87	33.962	Tetraodon_nigroviridis
ENSSARG00000003016	RNF17	85	64.874	ENSTBEG00000000282	RNF17	85	64.874	Tupaia_belangeri
ENSSARG00000003016	RNF17	90	69.222	ENSTTRG00000012698	RNF17	95	69.336	Tursiops_truncatus
ENSSARG00000003016	RNF17	74	93.548	ENSVPAG00000011388	RNF17	79	93.548	Vicugna_pacos
ENSSARG00000003016	RNF17	94	75.973	ENSVVUG00000006226	RNF17	97	80.808	Vulpes_vulpes
ENSSARG00000003016	RNF17	66	41.778	ENSXETG00000034020	RNF17	100	38.626	Xenopus_tropicalis
ENSSARG00000003016	RNF17	60	33.333	ENSXCOG00000018295	rnf17	68	33.929	Xiphophorus_couchianus
ENSSARG00000003016	RNF17	60	33.333	ENSXMAG00000014747	rnf17	69	33.929	Xiphophorus_maculatus