EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000003055 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 210833 bases
Position: chrGeneScaffold_3103:54590-265422
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002795	PUF	PF00806.19	2e-70	1	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	2	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	3	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	4	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	5	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	6	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	7	8
ENSSARP00000002795	PUF	PF00806.19	2e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003086	PUM1-201	3675	-	ENSSARP00000002795	1224 (aa)	-	UPI000158274D

Gene Model

Click here to download ENSSARG00000003055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000003055	PUM1	78	80.000	ENSSARG00000010992	PUM2	78	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003055	PUM1	94	98.206	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSSARG00000003055	PUM1	78	91.566	ENSAPOG00000021632	pum1	92	91.084	Acanthochromis_polyacanthus
ENSSARG00000003055	PUM1	94	98.210	ENSAMEG00000017656	PUM1	94	98.210	Ailuropoda_melanoleuca
ENSSARG00000003055	PUM1	88	79.627	ENSACIG00000021013	pum1	93	80.111	Amphilophus_citrinellus
ENSSARG00000003055	PUM1	78	91.566	ENSAOCG00000003944	pum1	92	85.577	Amphiprion_ocellaris
ENSSARG00000003055	PUM1	78	91.566	ENSAPEG00000014550	pum1	92	85.577	Amphiprion_percula
ENSSARG00000003055	PUM1	81	91.566	ENSATEG00000016004	pum1	93	91.084	Anabas_testudineus
ENSSARG00000003055	PUM1	91	96.865	ENSAPLG00000009351	PUM1	94	96.865	Anas_platyrhynchos
ENSSARG00000003055	PUM1	92	95.179	ENSACAG00000000682	PUM1	92	95.179	Anolis_carolinensis
ENSSARG00000003055	PUM1	91	100.000	ENSANAG00000027865	PUM1	99	100.000	Aotus_nancymaae
ENSSARG00000003055	PUM1	78	82.692	ENSACLG00000019354	pum1	93	85.577	Astatotilapia_calliptera
ENSSARG00000003055	PUM1	92	81.229	ENSAMXG00000020607	pum1	90	81.341	Astyanax_mexicanus
ENSSARG00000003055	PUM1	91	100.000	ENSBTAG00000018979	PUM1	99	100.000	Bos_taurus
ENSSARG00000003055	PUM1	91	100.000	ENSCJAG00000006035	PUM1	99	100.000	Callithrix_jacchus
ENSSARG00000003055	PUM1	91	100.000	ENSCAFG00000011205	PUM1	94	100.000	Canis_familiaris
ENSSARG00000003055	PUM1	84	97.882	ENSCAFG00020024616	PUM1	97	99.242	Canis_lupus_dingo
ENSSARG00000003055	PUM1	91	100.000	ENSCHIG00000012952	PUM1	97	98.094	Capra_hircus
ENSSARG00000003055	PUM1	91	99.558	ENSTSYG00000008868	PUM1	99	99.306	Carlito_syrichta
ENSSARG00000003055	PUM1	91	99.558	ENSCPOG00000031613	PUM1	99	99.306	Cavia_porcellus
ENSSARG00000003055	PUM1	91	100.000	ENSCATG00000017991	PUM1	99	100.000	Cercocebus_atys
ENSSARG00000003055	PUM1	91	99.558	ENSCLAG00000007662	PUM1	99	99.306	Chinchilla_lanigera
ENSSARG00000003055	PUM1	91	100.000	ENSCSAG00000001028	PUM1	94	100.000	Chlorocebus_sabaeus
ENSSARG00000003055	PUM1	85	99.563	ENSCHOG00000010245	PUM1	87	99.563	Choloepus_hoffmanni
ENSSARG00000003055	PUM1	92	96.973	ENSCPBG00000009288	PUM1	99	97.727	Chrysemys_picta_bellii
ENSSARG00000003055	PUM1	94	98.206	ENSCANG00000042606	PUM1	99	100.000	Colobus_angolensis_palliatus
ENSSARG00000003055	PUM1	91	99.115	ENSCGRG00001024949	Pum1	99	99.306	Cricetulus_griseus_chok1gshd
ENSSARG00000003055	PUM1	91	99.115	ENSCGRG00000014197	Pum1	99	99.306	Cricetulus_griseus_crigri
ENSSARG00000003055	PUM1	78	81.731	ENSCSEG00000015981	pum1	93	84.615	Cynoglossus_semilaevis
ENSSARG00000003055	PUM1	89	78.251	ENSCVAG00000007043	pum1	94	79.222	Cyprinodon_variegatus
ENSSARG00000003055	PUM1	91	81.229	ENSDARG00000099256	pum1	94	82.011	Danio_rerio
ENSSARG00000003055	PUM1	91	100.000	ENSDNOG00000010939	PUM1	94	100.000	Dasypus_novemcinctus
ENSSARG00000003055	PUM1	77	99.034	ENSDORG00000001875	Pum1	93	99.034	Dipodomys_ordii
ENSSARG00000003055	PUM1	82	98.095	ENSETEG00000004355	PUM1	81	98.095	Echinops_telfairi
ENSSARG00000003055	PUM1	91	100.000	ENSEASG00005010813	PUM1	94	100.000	Equus_asinus_asinus
ENSSARG00000003055	PUM1	91	99.558	ENSECAG00000021369	PUM1	94	99.558	Equus_caballus
ENSSARG00000003055	PUM1	70	99.556	ENSEEUG00000003871	PUM1	70	99.556	Erinaceus_europaeus
ENSSARG00000003055	PUM1	88	81.515	ENSELUG00000002409	pum1	97	83.718	Esox_lucius
ENSSARG00000003055	PUM1	91	100.000	ENSFCAG00000010374	PUM1	99	100.000	Felis_catus
ENSSARG00000003055	PUM1	93	93.653	ENSFALG00000001214	PUM1	94	93.653	Ficedula_albicollis
ENSSARG00000003055	PUM1	91	99.558	ENSFDAG00000011319	PUM1	99	99.306	Fukomys_damarensis
ENSSARG00000003055	PUM1	61	88.973	ENSGMOG00000010491	pum1	94	78.603	Gadus_morhua
ENSSARG00000003055	PUM1	91	97.088	ENSGALG00000042598	PUM1	97	97.088	Gallus_gallus
ENSSARG00000003055	PUM1	88	79.045	ENSGAFG00000015617	pum1	92	81.731	Gambusia_affinis
ENSSARG00000003055	PUM1	91	77.384	ENSGACG00000005717	pum1	94	79.425	Gasterosteus_aculeatus
ENSSARG00000003055	PUM1	91	96.753	ENSGAGG00000001290	PUM1	93	98.583	Gopherus_agassizii
ENSSARG00000003055	PUM1	94	98.206	ENSGGOG00000011983	PUM1	99	100.000	Gorilla_gorilla
ENSSARG00000003055	PUM1	88	79.234	ENSHBUG00000018718	pum1	94	79.667	Haplochromis_burtoni
ENSSARG00000003055	PUM1	91	99.115	ENSHGLG00000013819	Pum1	99	98.611	Heterocephalus_glaber_female
ENSSARG00000003055	PUM1	91	99.115	ENSHGLG00100008621	Pum1	99	98.611	Heterocephalus_glaber_male
ENSSARG00000003055	PUM1	91	79.578	ENSIPUG00000020421	pum1	92	86.275	Ictalurus_punctatus
ENSSARG00000003055	PUM1	91	100.000	ENSSTOG00000010757	PUM1	99	100.000	Ictidomys_tridecemlineatus
ENSSARG00000003055	PUM1	91	100.000	ENSJJAG00000000530	Pum1	99	100.000	Jaculus_jaculus
ENSSARG00000003055	PUM1	91	76.726	ENSKMAG00000003481	pum1	94	79.222	Kryptolebias_marmoratus
ENSSARG00000003055	PUM1	91	76.254	ENSLBEG00000002527	pum1	94	79.088	Labrus_bergylta
ENSSARG00000003055	PUM1	92	87.500	ENSLACG00000017188	PUM1	93	87.500	Latimeria_chalumnae
ENSSARG00000003055	PUM1	92	89.821	ENSLOCG00000005210	pum1	94	90.045	Lepisosteus_oculatus
ENSSARG00000003055	PUM1	91	98.673	ENSLAFG00000003178	PUM1	94	98.673	Loxodonta_africana
ENSSARG00000003055	PUM1	91	100.000	ENSMFAG00000010291	PUM1	99	100.000	Macaca_fascicularis
ENSSARG00000003055	PUM1	91	100.000	ENSMMUG00000013520	PUM1	99	100.000	Macaca_mulatta
ENSSARG00000003055	PUM1	91	100.000	ENSMNEG00000034639	PUM1	99	100.000	Macaca_nemestrina
ENSSARG00000003055	PUM1	94	98.473	ENSMLEG00000038743	PUM1	99	100.000	Mandrillus_leucophaeus
ENSSARG00000003055	PUM1	88	79.395	ENSMAMG00000011606	pum1	94	85.577	Mastacembelus_armatus
ENSSARG00000003055	PUM1	88	79.234	ENSMZEG00005005834	pum1	94	79.667	Maylandia_zebra
ENSSARG00000003055	PUM1	92	96.957	ENSMGAG00000000724	PUM1	97	96.753	Meleagris_gallopavo
ENSSARG00000003055	PUM1	91	99.115	ENSMAUG00000022090	Pum1	99	99.306	Mesocricetus_auratus
ENSSARG00000003055	PUM1	92	96.653	ENSMICG00000012213	-	94	98.230	Microcebus_murinus
ENSSARG00000003055	PUM1	91	99.558	ENSMICG00000007713	-	99	99.306	Microcebus_murinus
ENSSARG00000003055	PUM1	91	99.115	ENSMOCG00000015463	Pum1	99	98.611	Microtus_ochrogaster
ENSSARG00000003055	PUM1	81	88.276	ENSMMOG00000019817	pum1	96	90.843	Mola_mola
ENSSARG00000003055	PUM1	91	96.916	ENSMODG00000017067	PUM1	94	96.916	Monodelphis_domestica
ENSSARG00000003055	PUM1	81	88.506	ENSMALG00000016399	pum1	92	91.084	Monopterus_albus
ENSSARG00000003055	PUM1	91	99.115	MGP_CAROLIEiJ_G0026549	Pum1	99	98.611	Mus_caroli
ENSSARG00000003055	PUM1	91	99.558	ENSMUSG00000028580	Pum1	99	99.306	Mus_musculus
ENSSARG00000003055	PUM1	91	99.115	MGP_PahariEiJ_G0028881	Pum1	99	99.306	Mus_pahari
ENSSARG00000003055	PUM1	91	99.558	MGP_SPRETEiJ_G0027529	Pum1	99	99.306	Mus_spretus
ENSSARG00000003055	PUM1	91	100.000	ENSMPUG00000015454	PUM1	94	100.000	Mustela_putorius_furo
ENSSARG00000003055	PUM1	91	100.000	ENSMLUG00000006490	PUM1	94	100.000	Myotis_lucifugus
ENSSARG00000003055	PUM1	91	99.115	ENSNGAG00000002378	Pum1	99	99.242	Nannospalax_galili
ENSSARG00000003055	PUM1	75	81.130	ENSNBRG00000010689	pum1	97	83.376	Neolamprologus_brichardi
ENSSARG00000003055	PUM1	94	98.092	ENSNLEG00000001151	PUM1	99	99.306	Nomascus_leucogenys
ENSSARG00000003055	PUM1	71	100.000	ENSMEUG00000000976	-	74	93.878	Notamacropus_eugenii
ENSSARG00000003055	PUM1	76	99.563	ENSOPRG00000001776	PUM1	67	99.563	Ochotona_princeps
ENSSARG00000003055	PUM1	91	99.115	ENSODEG00000003465	PUM1	99	98.611	Octodon_degus
ENSSARG00000003055	PUM1	89	79.815	ENSONIG00000002290	pum1	94	80.111	Oreochromis_niloticus
ENSSARG00000003055	PUM1	73	100.000	ENSOANG00000004902	-	93	100.000	Ornithorhynchus_anatinus
ENSSARG00000003055	PUM1	91	99.558	ENSOCUG00000008641	PUM1	94	99.558	Oryctolagus_cuniculus
ENSSARG00000003055	PUM1	91	78.508	ENSORLG00000011482	pum1	93	80.000	Oryzias_latipes
ENSSARG00000003055	PUM1	91	78.619	ENSORLG00020019461	pum1	93	80.000	Oryzias_latipes_hni
ENSSARG00000003055	PUM1	91	78.619	ENSORLG00015011375	pum1	93	80.111	Oryzias_latipes_hsok
ENSSARG00000003055	PUM1	80	92.771	ENSOMEG00000009312	pum1	64	82.692	Oryzias_melastigma
ENSSARG00000003055	PUM1	91	99.558	ENSOGAG00000011063	PUM1	94	99.558	Otolemur_garnettii
ENSSARG00000003055	PUM1	91	100.000	ENSOARG00000001899	PUM1	94	100.000	Ovis_aries
ENSSARG00000003055	PUM1	94	98.206	ENSPPAG00000044003	PUM1	99	100.000	Pan_paniscus
ENSSARG00000003055	PUM1	94	98.430	ENSPPRG00000001370	PUM1	99	100.000	Panthera_pardus
ENSSARG00000003055	PUM1	94	98.206	ENSPTIG00000010798	PUM1	99	100.000	Panthera_tigris_altaica
ENSSARG00000003055	PUM1	94	98.206	ENSPTRG00000000453	PUM1	99	100.000	Pan_troglodytes
ENSSARG00000003055	PUM1	91	100.000	ENSPANG00000016338	PUM1	99	100.000	Papio_anubis
ENSSARG00000003055	PUM1	91	80.684	ENSPKIG00000010578	pum1	94	79.801	Paramormyrops_kingsleyae
ENSSARG00000003055	PUM1	91	97.309	ENSPSIG00000014118	PUM1	97	96.976	Pelodiscus_sinensis
ENSSARG00000003055	PUM1	75	79.288	ENSPMGG00000005836	pum1	97	81.772	Periophthalmus_magnuspinnatus
ENSSARG00000003055	PUM1	91	99.558	ENSPEMG00000010009	Pum1	99	99.306	Peromyscus_maniculatus_bairdii
ENSSARG00000003055	PUM1	91	96.976	ENSPCIG00000014151	PUM1	99	97.982	Phascolarctos_cinereus
ENSSARG00000003055	PUM1	83	81.808	ENSPFOG00000007289	pum1	99	82.722	Poecilia_formosa
ENSSARG00000003055	PUM1	88	80.952	ENSPLAG00000007256	pum1	98	79.667	Poecilia_latipinna
ENSSARG00000003055	PUM1	78	80.952	ENSPMEG00000019543	pum1	92	80.909	Poecilia_mexicana
ENSSARG00000003055	PUM1	90	78.305	ENSPREG00000005195	pum1	97	80.803	Poecilia_reticulata
ENSSARG00000003055	PUM1	91	100.000	ENSPPYG00000001621	PUM1	94	100.000	Pongo_abelii
ENSSARG00000003055	PUM1	72	99.383	ENSPCAG00000001979	PUM1	72	99.383	Procavia_capensis
ENSSARG00000003055	PUM1	91	99.558	ENSPCOG00000004398	PUM1	99	99.306	Propithecus_coquereli
ENSSARG00000003055	PUM1	94	95.291	ENSPVAG00000005207	PUM1	94	95.291	Pteropus_vampyrus
ENSSARG00000003055	PUM1	88	79.234	ENSPNYG00000009518	pum1	92	85.577	Pundamilia_nyererei
ENSSARG00000003055	PUM1	91	81.564	ENSPNAG00000026728	pum1	96	81.453	Pygocentrus_nattereri
ENSSARG00000003055	PUM1	91	99.558	ENSRNOG00000011709	Pum1	94	99.558	Rattus_norvegicus
ENSSARG00000003055	PUM1	93	98.206	ENSRBIG00000042521	PUM1	99	100.000	Rhinopithecus_bieti
ENSSARG00000003055	PUM1	93	98.206	ENSRROG00000020156	PUM1	99	100.000	Rhinopithecus_roxellana
ENSSARG00000003055	PUM1	91	100.000	ENSSBOG00000032037	PUM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSSARG00000003055	PUM1	91	96.753	ENSSHAG00000010918	PUM1	94	96.753	Sarcophilus_harrisii
ENSSARG00000003055	PUM1	81	88.506	ENSSMAG00000010918	pum1	92	91.084	Scophthalmus_maximus
ENSSARG00000003055	PUM1	88	79.395	ENSSDUG00000009021	pum1	94	80.111	Seriola_dumerili
ENSSARG00000003055	PUM1	85	79.395	ENSSLDG00000009667	pum1	98	80.111	Seriola_lalandi_dorsalis
ENSSARG00000003055	PUM1	91	96.749	ENSSPUG00000006267	PUM1	94	96.749	Sphenodon_punctatus
ENSSARG00000003055	PUM1	78	91.566	ENSSPAG00000016636	pum1	92	85.577	Stegastes_partitus
ENSSARG00000003055	PUM1	91	100.000	ENSSSCG00000003591	PUM1	98	100.000	Sus_scrofa
ENSSARG00000003055	PUM1	88	79.162	ENSTRUG00000013121	pum1	97	82.992	Takifugu_rubripes
ENSSARG00000003055	PUM1	89	79.070	ENSTNIG00000016983	pum1	93	79.578	Tetraodon_nigroviridis
ENSSARG00000003055	PUM1	79	99.563	ENSTBEG00000013810	PUM1	83	99.558	Tupaia_belangeri
ENSSARG00000003055	PUM1	86	100.000	ENSTTRG00000007436	PUM1	84	100.000	Tursiops_truncatus
ENSSARG00000003055	PUM1	90	100.000	ENSUAMG00000018262	-	94	100.000	Ursus_americanus
ENSSARG00000003055	PUM1	87	100.000	ENSUMAG00000009211	PUM1	97	99.758	Ursus_maritimus
ENSSARG00000003055	PUM1	83	99.621	ENSVPAG00000005902	PUM1	86	99.621	Vicugna_pacos
ENSSARG00000003055	PUM1	91	100.000	ENSVVUG00000014631	PUM1	97	98.320	Vulpes_vulpes
ENSSARG00000003055	PUM1	92	87.025	ENSXETG00000012904	pum1	94	87.025	Xenopus_tropicalis
ENSSARG00000003055	PUM1	88	79.045	ENSXMAG00000002945	pum1	98	79.444	Xiphophorus_maculatus