EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000003108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 7100 bases
Position: chrGeneScaffold_4689:981-8080
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000002859	Nop52	PF05997.12	4.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003157	-	1884	-	ENSSARP00000002859	628 (aa)	-	UPI000157FCE9

Gene Model

Click here to download ENSSARG00000003108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003108	-	79	66.667	ENSG00000160208	RRP1B	77	66.667	Homo_sapiens
ENSSARG00000003108	-	61	72.093	ENSAMEG00000011401	RRP1B	57	74.615	Ailuropoda_melanoleuca
ENSSARG00000003108	-	52	48.649	ENSAOCG00000017894	-	83	50.515	Amphiprion_ocellaris
ENSSARG00000003108	-	59	57.983	ENSAPLG00000004310	RRP1B	60	51.613	Anas_platyrhynchos
ENSSARG00000003108	-	70	51.408	ENSACAG00000017851	RRP1B	52	56.115	Anolis_carolinensis
ENSSARG00000003108	-	79	65.614	ENSANAG00000034889	RRP1B	77	65.614	Aotus_nancymaae
ENSSARG00000003108	-	75	64.211	ENSBTAG00000017418	RRP1B	76	64.211	Bos_taurus
ENSSARG00000003108	-	80	62.414	ENSCJAG00000017077	RRP1B	78	62.414	Callithrix_jacchus
ENSSARG00000003108	-	75	63.380	ENSCAFG00000010621	RRP1B	72	63.380	Canis_familiaris
ENSSARG00000003108	-	75	63.380	ENSCAFG00020018901	RRP1B	78	63.380	Canis_lupus_dingo
ENSSARG00000003108	-	75	67.368	ENSCHIG00000021519	RRP1B	76	67.368	Capra_hircus
ENSSARG00000003108	-	75	58.099	ENSCPOG00000002396	RRP1B	80	56.604	Cavia_porcellus
ENSSARG00000003108	-	79	64.211	ENSCCAG00000029384	RRP1B	76	64.211	Cebus_capucinus
ENSSARG00000003108	-	79	66.667	ENSCATG00000017423	RRP1B	77	66.667	Cercocebus_atys
ENSSARG00000003108	-	78	63.732	ENSCLAG00000005622	RRP1B	73	63.732	Chinchilla_lanigera
ENSSARG00000003108	-	79	66.667	ENSCSAG00000007961	RRP1B	77	66.667	Chlorocebus_sabaeus
ENSSARG00000003108	-	75	57.706	ENSCPBG00000010310	RRP1B	69	57.706	Chrysemys_picta_bellii
ENSSARG00000003108	-	79	66.667	ENSCANG00000040952	RRP1B	77	66.667	Colobus_angolensis_palliatus
ENSSARG00000003108	-	80	61.837	ENSCGRG00001010889	-	77	61.837	Cricetulus_griseus_chok1gshd
ENSSARG00000003108	-	80	63.309	ENSCGRG00001023882	-	77	63.309	Cricetulus_griseus_chok1gshd
ENSSARG00000003108	-	80	61.837	ENSCGRG00000001553	Rrp1b	80	61.837	Cricetulus_griseus_crigri
ENSSARG00000003108	-	53	52.809	ENSCSEG00000020711	-	78	41.135	Cynoglossus_semilaevis
ENSSARG00000003108	-	60	40.076	ENSDARG00000103337	rrp1	53	40.076	Danio_rerio
ENSSARG00000003108	-	79	65.141	ENSDNOG00000032774	RRP1B	78	65.141	Dasypus_novemcinctus
ENSSARG00000003108	-	73	66.154	ENSDORG00000005496	Rrp1b	82	66.154	Dipodomys_ordii
ENSSARG00000003108	-	54	78.571	ENSETEG00000019489	RRP1B	50	78.571	Echinops_telfairi
ENSSARG00000003108	-	75	63.509	ENSEASG00005001687	RRP1B	71	63.509	Equus_asinus_asinus
ENSSARG00000003108	-	75	63.860	ENSECAG00000018018	RRP1B	71	63.860	Equus_caballus
ENSSARG00000003108	-	59	52.846	ENSELUG00000015885	-	76	39.350	Esox_lucius
ENSSARG00000003108	-	79	65.845	ENSFCAG00000010272	RRP1B	76	65.845	Felis_catus
ENSSARG00000003108	-	62	51.724	ENSFALG00000002024	RRP1B	57	52.941	Ficedula_albicollis
ENSSARG00000003108	-	79	61.268	ENSFDAG00000010899	RRP1B	78	61.620	Fukomys_damarensis
ENSSARG00000003108	-	67	37.370	ENSFHEG00000016314	-	57	37.370	Fundulus_heteroclitus
ENSSARG00000003108	-	58	48.182	ENSGMOG00000001953	-	55	48.182	Gadus_morhua
ENSSARG00000003108	-	65	51.613	ENSGALG00000035696	RRP1B	56	52.330	Gallus_gallus
ENSSARG00000003108	-	61	48.062	ENSGACG00000001438	rrp1	60	48.062	Gasterosteus_aculeatus
ENSSARG00000003108	-	63	57.348	ENSGAGG00000000375	RRP1B	55	57.348	Gopherus_agassizii
ENSSARG00000003108	-	79	66.667	ENSGGOG00000012069	RRP1B	77	66.667	Gorilla_gorilla
ENSSARG00000003108	-	74	59.930	ENSHGLG00000004968	RRP1B	76	59.930	Heterocephalus_glaber_female
ENSSARG00000003108	-	73	54.839	ENSHGLG00100002232	RRP1B	76	54.839	Heterocephalus_glaber_male
ENSSARG00000003108	-	61	42.336	ENSHCOG00000018388	-	52	41.606	Hippocampus_comes
ENSSARG00000003108	-	57	48.624	ENSIPUG00000000673	-	57	37.793	Ictalurus_punctatus
ENSSARG00000003108	-	74	64.211	ENSSTOG00000011790	RRP1B	67	64.211	Ictidomys_tridecemlineatus
ENSSARG00000003108	-	78	55.517	ENSJJAG00000021279	Rrp1b	71	55.631	Jaculus_jaculus
ENSSARG00000003108	-	59	50.806	ENSKMAG00000005539	rrp1	61	50.000	Kryptolebias_marmoratus
ENSSARG00000003108	-	61	49.624	ENSLACG00000017332	-	56	49.624	Latimeria_chalumnae
ENSSARG00000003108	-	60	46.923	ENSLOCG00000004064	-	57	46.512	Lepisosteus_oculatus
ENSSARG00000003108	-	67	58.776	ENSLAFG00000000766	RRP1B	73	58.776	Loxodonta_africana
ENSSARG00000003108	-	79	66.667	ENSMFAG00000039152	RRP1B	77	66.667	Macaca_fascicularis
ENSSARG00000003108	-	79	66.667	ENSMMUG00000000104	RRP1B	77	66.667	Macaca_mulatta
ENSSARG00000003108	-	79	66.667	ENSMNEG00000034269	RRP1B	77	66.667	Macaca_nemestrina
ENSSARG00000003108	-	79	66.667	ENSMLEG00000040044	RRP1B	81	66.316	Mandrillus_leucophaeus
ENSSARG00000003108	-	65	51.971	ENSMGAG00000014591	RRP1B	53	53.047	Meleagris_gallopavo
ENSSARG00000003108	-	80	64.029	ENSMAUG00000021508	Rrp1b	78	64.388	Mesocricetus_auratus
ENSSARG00000003108	-	78	64.912	ENSMICG00000004686	RRP1B	78	64.912	Microcebus_murinus
ENSSARG00000003108	-	60	69.048	ENSMOCG00000001117	Rrp1b	78	57.042	Microtus_ochrogaster
ENSSARG00000003108	-	76	60.627	ENSMODG00000021033	RRP1B	70	61.754	Monodelphis_domestica
ENSSARG00000003108	-	75	63.538	MGP_CAROLIEiJ_G0021376	Rrp1b	76	63.309	Mus_caroli
ENSSARG00000003108	-	75	62.230	ENSMUSG00000058392	Rrp1b	77	62.230	Mus_musculus
ENSSARG00000003108	-	75	63.669	MGP_PahariEiJ_G0023695	Rrp1b	76	63.669	Mus_pahari
ENSSARG00000003108	-	75	62.816	MGP_SPRETEiJ_G0022290	Rrp1b	75	62.590	Mus_spretus
ENSSARG00000003108	-	62	62.782	ENSMPUG00000009810	RRP1B	78	62.782	Mustela_putorius_furo
ENSSARG00000003108	-	74	64.311	ENSMLUG00000007738	RRP1B	76	64.311	Myotis_lucifugus
ENSSARG00000003108	-	75	60.071	ENSNGAG00000021073	Rrp1b	79	60.071	Nannospalax_galili
ENSSARG00000003108	-	69	66.316	ENSNLEG00000001490	RRP1B	75	66.316	Nomascus_leucogenys
ENSSARG00000003108	-	78	57.143	ENSODEG00000013177	RRP1B	78	57.143	Octodon_degus
ENSSARG00000003108	-	57	49.123	ENSONIG00000004264	rrp1	54	48.246	Oreochromis_niloticus
ENSSARG00000003108	-	62	63.121	ENSOANG00000006470	RRP1B	68	57.914	Ornithorhynchus_anatinus
ENSSARG00000003108	-	75	56.584	ENSOCUG00000025931	RRP1B	77	58.029	Oryctolagus_cuniculus
ENSSARG00000003108	-	53	55.556	ENSOMEG00000016910	-	53	42.403	Oryzias_melastigma
ENSSARG00000003108	-	60	67.681	ENSOGAG00000009872	RRP1B	60	67.681	Otolemur_garnettii
ENSSARG00000003108	-	75	66.316	ENSOARG00000011314	RRP1B	81	67.368	Ovis_aries
ENSSARG00000003108	-	79	66.667	ENSPPAG00000035319	RRP1B	81	66.667	Pan_paniscus
ENSSARG00000003108	-	79	65.141	ENSPPRG00000010356	RRP1B	77	65.141	Panthera_pardus
ENSSARG00000003108	-	65	65.385	ENSPTIG00000016894	RRP1B	74	65.385	Panthera_tigris_altaica
ENSSARG00000003108	-	79	66.667	ENSPTRG00000013958	RRP1B	77	66.667	Pan_troglodytes
ENSSARG00000003108	-	79	66.667	ENSPANG00000011090	RRP1B	77	66.667	Papio_anubis
ENSSARG00000003108	-	61	50.365	ENSPKIG00000003422	-	51	50.365	Paramormyrops_kingsleyae
ENSSARG00000003108	-	65	58.065	ENSPSIG00000008152	RRP1B	54	58.065	Pelodiscus_sinensis
ENSSARG00000003108	-	78	63.899	ENSPEMG00000022490	Rrp1b	76	63.669	Peromyscus_maniculatus_bairdii
ENSSARG00000003108	-	74	60.915	ENSPCIG00000015513	RRP1B	73	60.915	Phascolarctos_cinereus
ENSSARG00000003108	-	61	44.681	ENSPFOG00000007424	-	54	43.972	Poecilia_formosa
ENSSARG00000003108	-	64	41.549	ENSPMEG00000007042	-	51	41.901	Poecilia_mexicana
ENSSARG00000003108	-	79	66.316	ENSPPYG00000011470	RRP1B	77	66.316	Pongo_abelii
ENSSARG00000003108	-	69	76.842	ENSPCAG00000013723	RRP1B	61	76.842	Procavia_capensis
ENSSARG00000003108	-	79	64.211	ENSPCOG00000017927	RRP1B	78	64.211	Propithecus_coquereli
ENSSARG00000003108	-	57	74.611	ENSPVAG00000001436	RRP1B	58	74.611	Pteropus_vampyrus
ENSSARG00000003108	-	78	64.260	ENSRNOG00000001194	Rrp1b	75	64.260	Rattus_norvegicus
ENSSARG00000003108	-	79	59.649	ENSRBIG00000041689	RRP1B	77	59.649	Rhinopithecus_bieti
ENSSARG00000003108	-	79	66.667	ENSRROG00000031499	RRP1B	77	66.667	Rhinopithecus_roxellana
ENSSARG00000003108	-	76	87.500	ENSSBOG00000034727	RRP1B	70	87.500	Saimiri_boliviensis_boliviensis
ENSSARG00000003108	-	75	60.279	ENSSHAG00000017789	RRP1B	69	60.702	Sarcophilus_harrisii
ENSSARG00000003108	-	59	46.032	ENSSFOG00015003932	-	60	40.461	Scleropages_formosus
ENSSARG00000003108	-	64	46.875	ENSSMAG00000016847	-	71	40.909	Scophthalmus_maximus
ENSSARG00000003108	-	62	52.518	ENSSPUG00000002834	RRP1B	55	51.079	Sphenodon_punctatus
ENSSARG00000003108	-	75	61.268	ENSSSCG00000021698	RRP1B	82	61.268	Sus_scrofa
ENSSARG00000003108	-	62	53.676	ENSTGUG00000005926	RRP1B	58	53.763	Taeniopygia_guttata
ENSSARG00000003108	-	54	47.191	ENSTNIG00000005053	rrp1	76	40.876	Tetraodon_nigroviridis
ENSSARG00000003108	-	78	64.789	ENSTBEG00000000422	RRP1B	94	64.789	Tupaia_belangeri
ENSSARG00000003108	-	75	64.057	ENSTTRG00000000723	RRP1B	77	64.057	Tursiops_truncatus
ENSSARG00000003108	-	75	64.085	ENSUAMG00000026765	RRP1B	78	64.085	Ursus_americanus
ENSSARG00000003108	-	61	71.212	ENSUMAG00000025510	RRP1B	76	73.684	Ursus_maritimus
ENSSARG00000003108	-	79	63.732	ENSVVUG00000024509	RRP1B	80	63.732	Vulpes_vulpes
ENSSARG00000003108	-	57	48.669	ENSXETG00000013683	rrp1b	59	48.669	Xenopus_tropicalis
ENSSARG00000003108	-	53	52.688	ENSXMAG00000023123	-	52	39.796	Xiphophorus_maculatus