EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000003136 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Minus strand
Length
110013 bases
Position
chrGeneScaffold_500:4201-114213
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000002940RNA_pol_Rpb1_5PF04998.176.8e-6613
ENSSARP00000002940RNA_pol_Rpb1_5PF04998.176.8e-6623
ENSSARP00000002940RNA_pol_Rpb1_5PF04998.176.8e-6633
ENSSARP00000002940RNA_pol_Rpb1_4PF05000.172.8e-2411
ENSSARP00000002940RNA_pol_Rpb1_2PF00623.204.9e-0811
ENSSARP00000002940RNA_pol_Rpb1_3PF04983.188.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000003246-5016-ENSSARP000000029401672 (aa)-UPI000158232F
Gene Model
Click here to download ENSSARG00000003136's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003136's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000003136-7696.809ENSG00000068654POLR1A7896.809Homo_sapiens
ENSSARG00000003136-5197.561ENSAPOG00000017945polr1a7997.561Acanthochromis_polyacanthus
ENSSARG00000003136-7698.936ENSAMEG00000005807POLR1A7598.936Ailuropoda_melanoleuca
ENSSARG00000003136-7195.122ENSACIG00000022147polr1a7095.122Amphilophus_citrinellus
ENSSARG00000003136-7195.122ENSAOCG00000017336polr1a7195.122Amphiprion_ocellaris
ENSSARG00000003136-7195.122ENSAPEG00000016105polr1a7195.122Amphiprion_percula
ENSSARG00000003136-7195.122ENSATEG00000016773polr1a7195.122Anabas_testudineus
ENSSARG00000003136-6292.683ENSAPLG00000013871POLR1A7192.683Anas_platyrhynchos
ENSSARG00000003136-7192.683ENSACAG00000012141POLR1A6792.683Anolis_carolinensis
ENSSARG00000003136-7694.681ENSANAG00000033927POLR1A7594.681Aotus_nancymaae
ENSSARG00000003136-7195.122ENSACLG00000020541polr1a7095.122Astatotilapia_calliptera
ENSSARG00000003136-7696.809ENSBTAG00000006481POLR1A7596.809Bos_taurus
ENSSARG00000003136-7172.500WBGene00012999rpoa-16872.500Caenorhabditis_elegans
ENSSARG00000003136-7694.681ENSCJAG00000019547POLR1A7594.681Callithrix_jacchus
ENSSARG00000003136-7697.872ENSCAFG00000007613POLR1A7597.872Canis_familiaris
ENSSARG00000003136-7697.872ENSCAFG00020014752POLR1A7597.872Canis_lupus_dingo
ENSSARG00000003136-7694.681ENSCHIG00000018204POLR1A7694.681Capra_hircus
ENSSARG00000003136-7494.681ENSTSYG00000002761POLR1A7494.681Carlito_syrichta
ENSSARG00000003136-7495.745ENSCAPG00000010132POLR1A7295.745Cavia_aperea
ENSSARG00000003136-7695.745ENSCPOG00000012350POLR1A7395.745Cavia_porcellus
ENSSARG00000003136-7695.745ENSCCAG00000019839POLR1A7595.745Cebus_capucinus
ENSSARG00000003136-7697.872ENSCATG00000029786POLR1A7597.872Cercocebus_atys
ENSSARG00000003136-7697.872ENSCLAG00000005187POLR1A7397.872Chinchilla_lanigera
ENSSARG00000003136-7697.872ENSCSAG00000016251POLR1A7597.872Chlorocebus_sabaeus
ENSSARG00000003136-7197.561ENSCPBG00000001115POLR1A7297.561Chrysemys_picta_bellii
ENSSARG00000003136-7182.927ENSCSAVG00000007184-6882.927Ciona_savignyi
ENSSARG00000003136-7696.809ENSCANG00000031785POLR1A7596.809Colobus_angolensis_palliatus
ENSSARG00000003136-7196.809ENSCGRG00001006651Polr1a7496.809Cricetulus_griseus_chok1gshd
ENSSARG00000003136-7195.122ENSCSEG00000020190polr1a7095.122Cynoglossus_semilaevis
ENSSARG00000003136-7195.122ENSCVAG00000020941polr1a6995.122Cyprinodon_variegatus
ENSSARG00000003136-7095.122ENSDARG00000098375polr1a7095.122Danio_rerio
ENSSARG00000003136-7684.000ENSDNOG00000010829POLR1A7584.000Dasypus_novemcinctus
ENSSARG00000003136-7697.872ENSDORG00000008298Polr1a7597.872Dipodomys_ordii
ENSSARG00000003136-6772.500FBgn0019938RpI16972.500Drosophila_melanogaster
ENSSARG00000003136-5692.000ENSETEG00000000412-5692.000Echinops_telfairi
ENSSARG00000003136-7066.667ENSEBUG00000005667-7466.667Eptatretus_burgeri
ENSSARG00000003136-7697.872ENSEASG00005001625POLR1A7597.872Equus_asinus_asinus
ENSSARG00000003136-7697.872ENSECAG00000036306-7597.872Equus_caballus
ENSSARG00000003136-7697.872ENSECAG00000010092POLR1A7597.872Equus_caballus
ENSSARG00000003136-7697.872ENSECAG00000030510-7897.872Equus_caballus
ENSSARG00000003136-5697.561ENSEEUG00000000676POLR1A5597.561Erinaceus_europaeus
ENSSARG00000003136-7195.122ENSELUG00000012769polr1a7095.122Esox_lucius
ENSSARG00000003136-7696.809ENSFCAG00000008966POLR1A7596.809Felis_catus
ENSSARG00000003136-7584.043ENSFALG00000010082POLR1A7484.043Ficedula_albicollis
ENSSARG00000003136-7697.872ENSFDAG00000013726POLR1A7397.872Fukomys_damarensis
ENSSARG00000003136-6895.122ENSFHEG00000005996polr1a6895.122Fundulus_heteroclitus
ENSSARG00000003136-7087.805ENSGMOG00000002230polr1a6887.805Gadus_morhua
ENSSARG00000003136-6592.683ENSGALG00000038160-6892.683Gallus_gallus
ENSSARG00000003136-7195.122ENSGAFG00000015266polr1a6795.122Gambusia_affinis
ENSSARG00000003136-7095.122ENSGACG00000018791polr1a6995.122Gasterosteus_aculeatus
ENSSARG00000003136-6697.561ENSGAGG00000004984-7397.561Gopherus_agassizii
ENSSARG00000003136-7697.872ENSGGOG00000001788POLR1A7597.872Gorilla_gorilla
ENSSARG00000003136-6095.122ENSHBUG00000020021polr1a6595.122Haplochromis_burtoni
ENSSARG00000003136-7697.872ENSHGLG00000006334POLR1A7597.872Heterocephalus_glaber_female
ENSSARG00000003136-7697.872ENSHGLG00100006614POLR1A7597.872Heterocephalus_glaber_male
ENSSARG00000003136-7195.122ENSHCOG00000003345polr1a6995.122Hippocampus_comes
ENSSARG00000003136-7192.683ENSIPUG00000013174polr1a7192.683Ictalurus_punctatus
ENSSARG00000003136-7495.745ENSSTOG00000012580POLR1A7495.745Ictidomys_tridecemlineatus
ENSSARG00000003136-7494.681ENSJJAG00000013113Polr1a7494.681Jaculus_jaculus
ENSSARG00000003136-7195.122ENSKMAG00000007399polr1a7195.122Kryptolebias_marmoratus
ENSSARG00000003136-6592.683ENSLBEG00000015401polr1a6892.683Labrus_bergylta
ENSSARG00000003136-7195.122ENSLOCG00000010881polr1a7195.122Lepisosteus_oculatus
ENSSARG00000003136-7698.936ENSLAFG00000014948POLR1A7598.936Loxodonta_africana
ENSSARG00000003136-7697.872ENSMFAG00000046097POLR1A7597.872Macaca_fascicularis
ENSSARG00000003136-7697.872ENSMMUG00000015815POLR1A7597.872Macaca_mulatta
ENSSARG00000003136-7697.872ENSMNEG00000043313POLR1A7597.872Macaca_nemestrina
ENSSARG00000003136-7697.872ENSMLEG00000042428POLR1A7597.872Mandrillus_leucophaeus
ENSSARG00000003136-7197.561ENSMAMG00000016565polr1a6897.561Mastacembelus_armatus
ENSSARG00000003136-7195.122ENSMZEG00005004915polr1a7195.122Maylandia_zebra
ENSSARG00000003136-7584.043ENSMGAG00000013111POLR1A7184.043Meleagris_gallopavo
ENSSARG00000003136-7296.809ENSMAUG00000008497Polr1a7796.809Mesocricetus_auratus
ENSSARG00000003136-7695.745ENSMICG00000000757POLR1A7595.745Microcebus_murinus
ENSSARG00000003136-7496.809ENSMOCG00000000122Polr1a7696.809Microtus_ochrogaster
ENSSARG00000003136-7195.122ENSMMOG00000010216polr1a6995.122Mola_mola
ENSSARG00000003136-69100.000ENSMODG00000009335POLR1A67100.000Monodelphis_domestica
ENSSARG00000003136-7195.122ENSMALG00000013363polr1a7495.122Monopterus_albus
ENSSARG00000003136-7595.745MGP_CAROLIEiJ_G0028494Polr1a7595.745Mus_caroli
ENSSARG00000003136-7595.745ENSMUSG00000049553Polr1a7595.745Mus_musculus
ENSSARG00000003136-7493.617MGP_PahariEiJ_G0022230Polr1a7593.617Mus_pahari
ENSSARG00000003136-7595.745MGP_SPRETEiJ_G0029499Polr1a7495.745Mus_spretus
ENSSARG00000003136-7696.809ENSMPUG00000009135POLR1A7596.809Mustela_putorius_furo
ENSSARG00000003136-7696.809ENSMLUG00000015723POLR1A7596.809Myotis_lucifugus
ENSSARG00000003136-7496.809ENSNGAG00000017907Polr1a7496.809Nannospalax_galili
ENSSARG00000003136-7195.122ENSNBRG00000000519polr1a7195.122Neolamprologus_brichardi
ENSSARG00000003136-7688.000ENSNLEG00000002264POLR1A7488.000Nomascus_leucogenys
ENSSARG00000003136-5993.617ENSMEUG00000011665-5693.617Notamacropus_eugenii
ENSSARG00000003136-7396.809ENSOPRG00000008269POLR1A7196.809Ochotona_princeps
ENSSARG00000003136-7696.809ENSODEG00000003542POLR1A7396.809Octodon_degus
ENSSARG00000003136-7195.122ENSONIG00000015895polr1a7095.122Oreochromis_niloticus
ENSSARG00000003136-7697.872ENSOCUG00000010138POLR1A7597.872Oryctolagus_cuniculus
ENSSARG00000003136-7197.561ENSORLG00000008753polr1a7097.561Oryzias_latipes
ENSSARG00000003136-7197.561ENSORLG00020020726polr1a6997.561Oryzias_latipes_hni
ENSSARG00000003136-6697.561ENSORLG00015016071polr1a6797.561Oryzias_latipes_hsok
ENSSARG00000003136-7697.872ENSOGAG00000004031POLR1A7597.872Otolemur_garnettii
ENSSARG00000003136-7695.745ENSOARG00000020601POLR1A7595.745Ovis_aries
ENSSARG00000003136-7696.809ENSPPAG00000042450POLR1A7596.809Pan_paniscus
ENSSARG00000003136-7696.809ENSPPRG00000006702POLR1A7596.809Panthera_pardus
ENSSARG00000003136-7696.809ENSPTIG00000018783POLR1A7596.809Panthera_tigris_altaica
ENSSARG00000003136-7697.872ENSPTRG00000012147POLR1A7597.872Pan_troglodytes
ENSSARG00000003136-7697.872ENSPANG00000025908POLR1A7597.872Papio_anubis
ENSSARG00000003136-7197.561ENSPKIG00000005468polr1a6897.561Paramormyrops_kingsleyae
ENSSARG00000003136-5289.362ENSPSIG00000009321-8389.362Pelodiscus_sinensis
ENSSARG00000003136-7496.809ENSPEMG00000022224Polr1a7596.809Peromyscus_maniculatus_bairdii
ENSSARG00000003136-67100.000ENSPCIG00000004222POLR1A67100.000Phascolarctos_cinereus
ENSSARG00000003136-7195.122ENSPFOG00000005025polr1a7195.122Poecilia_formosa
ENSSARG00000003136-7195.122ENSPLAG00000021389polr1a7195.122Poecilia_latipinna
ENSSARG00000003136-7195.122ENSPMEG00000006463polr1a6795.122Poecilia_mexicana
ENSSARG00000003136-7195.122ENSPREG00000002389polr1a7195.122Poecilia_reticulata
ENSSARG00000003136-7497.872ENSPPYG00000012217POLR1A7597.872Pongo_abelii
ENSSARG00000003136-6997.436ENSPCAG00000011582POLR1A6897.436Procavia_capensis
ENSSARG00000003136-7695.745ENSPCOG00000026987POLR1A7595.745Propithecus_coquereli
ENSSARG00000003136-6797.872ENSPVAG00000012674POLR1A6797.872Pteropus_vampyrus
ENSSARG00000003136-7195.122ENSPNYG00000000026polr1a7195.122Pundamilia_nyererei
ENSSARG00000003136-7190.244ENSPNAG00000019223polr1a7090.244Pygocentrus_nattereri
ENSSARG00000003136-7495.745ENSRNOG00000009545Polr1a7595.745Rattus_norvegicus
ENSSARG00000003136-7696.809ENSRBIG00000028335POLR1A7596.809Rhinopithecus_bieti
ENSSARG00000003136-7696.809ENSRROG00000031473POLR1A7796.809Rhinopithecus_roxellana
ENSSARG00000003136-7084.615YOR341WRPA1906784.615Saccharomyces_cerevisiae
ENSSARG00000003136-7695.745ENSSBOG00000030262POLR1A7595.745Saimiri_boliviensis_boliviensis
ENSSARG00000003136-70100.000ENSSHAG00000014739POLR1A70100.000Sarcophilus_harrisii
ENSSARG00000003136-7197.561ENSSFOG00015019716polr1a7197.561Scleropages_formosus
ENSSARG00000003136-7195.122ENSSMAG00000014342polr1a7095.122Scophthalmus_maximus
ENSSARG00000003136-7095.122ENSSDUG00000014631polr1a7095.122Seriola_dumerili
ENSSARG00000003136-7195.122ENSSLDG00000024095polr1a7095.122Seriola_lalandi_dorsalis
ENSSARG00000003136-7197.561ENSSPUG00000004215POLR1A7197.561Sphenodon_punctatus
ENSSARG00000003136-5195.122ENSSPAG00000016341polr1a7295.122Stegastes_partitus
ENSSARG00000003136-7092.000ENSSSCG00000008226POLR1A8392.000Sus_scrofa
ENSSARG00000003136-7584.043ENSTGUG00000010704POLR1A7384.043Taeniopygia_guttata
ENSSARG00000003136-7090.244ENSTRUG00000002210polr1a6790.244Takifugu_rubripes
ENSSARG00000003136-6884.043ENSTNIG00000010116polr1a6884.043Tetraodon_nigroviridis
ENSSARG00000003136-5197.436ENSTBEG00000008646POLR1A5197.436Tupaia_belangeri
ENSSARG00000003136-7196.809ENSTTRG00000008597POLR1A7196.809Tursiops_truncatus
ENSSARG00000003136-5398.936ENSUAMG00000012158-7298.936Ursus_americanus
ENSSARG00000003136-7698.936ENSUMAG00000006700POLR1A7598.936Ursus_maritimus
ENSSARG00000003136-7697.872ENSVVUG00000001245POLR1A7597.872Vulpes_vulpes
ENSSARG00000003136-7197.561ENSXETG00000001952polr1a7597.561Xenopus_tropicalis
ENSSARG00000003136-7095.122ENSXMAG00000004032polr1a7095.122Xiphophorus_maculatus

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