EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000003330 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
YER146W
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Minus strand
Length
48237 bases
Position
chrGeneScaffold_1521:41114-89350
Accession
17162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000002988LSMPF01423.221.7e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000003299LSM5-201276-ENSSARP0000000298891 (aa)-UPI00015819B1
Gene Model
Click here to download ENSSARG00000003330's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003330's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000003330LSM510071.429ENSG00000106355LSM510071.429Homo_sapiens
ENSSARG00000003330LSM56292.857ENSAPOG00000011743LSM510056.452Acanthochromis_polyacanthus
ENSSARG00000003330LSM510067.033ENSAPOG00000020779LSM510067.033Acanthochromis_polyacanthus
ENSSARG00000003330LSM510071.429ENSAMEG00000006700LSM510071.429Ailuropoda_melanoleuca
ENSSARG00000003330LSM510067.033ENSAOCG00000001636lsm510067.033Amphiprion_ocellaris
ENSSARG00000003330LSM56856.452ENSAPEG00000008201lsm510056.452Amphiprion_percula
ENSSARG00000003330LSM510067.033ENSAPEG00000008151lsm510067.033Amphiprion_percula
ENSSARG00000003330LSM58166.216ENSAPLG00000008171LSM510066.216Anas_platyrhynchos
ENSSARG00000003330LSM56298.214ENSACAG00000009530LSM59398.214Anolis_carolinensis
ENSSARG00000003330LSM510070.330ENSANAG00000034409-10070.330Aotus_nancymaae
ENSSARG00000003330LSM59970.000ENSANAG00000024192-8285.455Aotus_nancymaae
ENSSARG00000003330LSM510052.747ENSANAG00000037758-10052.747Aotus_nancymaae
ENSSARG00000003330LSM59666.667ENSACLG00000012891lsm59966.667Astatotilapia_calliptera
ENSSARG00000003330LSM510054.255ENSAMXG00000035543lsm510054.255Astyanax_mexicanus
ENSSARG00000003330LSM55379.167ENSBTAG00000052014-6379.167Bos_taurus
ENSSARG00000003330LSM510071.429ENSBTAG00000002332LSM510071.429Bos_taurus
ENSSARG00000003330LSM510053.846WBGene00003079lsm-510053.846Caenorhabditis_elegans
ENSSARG00000003330LSM59962.222ENSCJAG00000005678-10062.222Callithrix_jacchus
ENSSARG00000003330LSM510071.429ENSCJAG00000047379LSM58190.385Callithrix_jacchus
ENSSARG00000003330LSM510071.429ENSCAFG00000019261-10071.429Canis_familiaris
ENSSARG00000003330LSM55592.000ENSCAFG00000030781-5892.000Canis_familiaris
ENSSARG00000003330LSM510071.429ENSCAFG00020004946LSM510071.429Canis_lupus_dingo
ENSSARG00000003330LSM510070.330ENSCHIG00000004079-10070.330Capra_hircus
ENSSARG00000003330LSM56269.643ENSCHIG00000021428-6469.643Capra_hircus
ENSSARG00000003330LSM510071.429ENSCHIG00000024539LSM510071.429Capra_hircus
ENSSARG00000003330LSM510054.945ENSTSYG00000026530-9154.945Carlito_syrichta
ENSSARG00000003330LSM510062.637ENSTSYG00000036637-10062.637Carlito_syrichta
ENSSARG00000003330LSM510071.429ENSTSYG00000006449-8092.157Carlito_syrichta
ENSSARG00000003330LSM510061.538ENSTSYG00000028728-10061.538Carlito_syrichta
ENSSARG00000003330LSM510071.429ENSCPOG00000036386LSM58097.872Cavia_porcellus
ENSSARG00000003330LSM510045.055ENSCCAG00000037334-10045.055Cebus_capucinus
ENSSARG00000003330LSM510053.846ENSCCAG00000032792-10053.846Cebus_capucinus
ENSSARG00000003330LSM510071.429ENSCCAG00000037808-10071.429Cebus_capucinus
ENSSARG00000003330LSM510070.330ENSCCAG00000000821-10070.330Cebus_capucinus
ENSSARG00000003330LSM510069.231ENSCCAG00000032123-10069.231Cebus_capucinus
ENSSARG00000003330LSM510071.429ENSCATG00000040218LSM510071.429Cercocebus_atys
ENSSARG00000003330LSM59968.889ENSCATG00000014790-9596.364Cercocebus_atys
ENSSARG00000003330LSM510062.637ENSCLAG00000005062-9062.637Chinchilla_lanigera
ENSSARG00000003330LSM510071.429ENSCLAG00000000202LSM58097.872Chinchilla_lanigera
ENSSARG00000003330LSM56298.214ENSCHOG00000005335LSM57498.214Choloepus_hoffmanni
ENSSARG00000003330LSM510071.429ENSCPBG00000013685LSM510071.429Chrysemys_picta_bellii
ENSSARG00000003330LSM59865.169ENSCING00000020625-9965.169Ciona_intestinalis
ENSSARG00000003330LSM59563.953ENSCSAVG00000001439-9863.953Ciona_savignyi
ENSSARG00000003330LSM510071.429ENSCANG00000039909LSM510071.429Colobus_angolensis_palliatus
ENSSARG00000003330LSM510071.429ENSCGRG00001015461Lsm58097.872Cricetulus_griseus_chok1gshd
ENSSARG00000003330LSM58266.667ENSCGRG00000007677Lsm510066.667Cricetulus_griseus_crigri
ENSSARG00000003330LSM510065.934ENSCVAG00000004262lsm510065.934Cyprinodon_variegatus
ENSSARG00000003330LSM510065.934ENSDARG00000071573lsm510065.934Danio_rerio
ENSSARG00000003330LSM510071.429ENSDNOG00000034958LSM510071.429Dasypus_novemcinctus
ENSSARG00000003330LSM56287.500ENSDNOG00000049495-6287.500Dasypus_novemcinctus
ENSSARG00000003330LSM510071.429ENSDORG00000009422Lsm510071.429Dipodomys_ordii
ENSSARG00000003330LSM59257.143FBgn0035675CG66109257.143Drosophila_melanogaster
ENSSARG00000003330LSM56262.500ENSETEG00000000777-6362.500Echinops_telfairi
ENSSARG00000003330LSM59952.222ENSETEG00000001469-9952.222Echinops_telfairi
ENSSARG00000003330LSM58152.703ENSETEG00000016074-9852.703Echinops_telfairi
ENSSARG00000003330LSM510053.846ENSETEG00000010651-10053.846Echinops_telfairi
ENSSARG00000003330LSM510071.429ENSETEG00000018068LSM510071.429Echinops_telfairi
ENSSARG00000003330LSM510065.934ENSEBUG00000008540lsm510065.934Eptatretus_burgeri
ENSSARG00000003330LSM510071.429ENSEASG00005003500LSM510071.429Equus_asinus_asinus
ENSSARG00000003330LSM510062.637ENSECAG00000018445LSM510062.637Equus_caballus
ENSSARG00000003330LSM56354.386ENSEEUG00000004102LSM59554.386Erinaceus_europaeus
ENSSARG00000003330LSM510065.934ENSELUG00000007792lsm510065.934Esox_lucius
ENSSARG00000003330LSM510071.429ENSFCAG00000000230LSM510071.429Felis_catus
ENSSARG00000003330LSM58467.105ENSFALG00000001892LSM59267.105Ficedula_albicollis
ENSSARG00000003330LSM510071.429ENSFDAG00000008767LSM58097.872Fukomys_damarensis
ENSSARG00000003330LSM58453.947ENSFHEG00000004011lsm58253.947Fundulus_heteroclitus
ENSSARG00000003330LSM59965.556ENSGMOG00000018235lsm510065.556Gadus_morhua
ENSSARG00000003330LSM510070.330ENSGALG00000041625LSM510070.330Gallus_gallus
ENSSARG00000003330LSM56856.452ENSGAFG00000016824lsm510056.452Gambusia_affinis
ENSSARG00000003330LSM510067.033ENSGACG00000005528lsm510067.033Gasterosteus_aculeatus
ENSSARG00000003330LSM510071.429ENSGAGG00000015593LSM510071.429Gopherus_agassizii
ENSSARG00000003330LSM510071.429ENSGGOG00000043469LSM510071.429Gorilla_gorilla
ENSSARG00000003330LSM59666.667ENSHBUG00000013773lsm59966.667Haplochromis_burtoni
ENSSARG00000003330LSM510071.429ENSHGLG00000011765LSM58097.872Heterocephalus_glaber_female
ENSSARG00000003330LSM510068.132ENSHGLG00100015610LSM57991.489Heterocephalus_glaber_male
ENSSARG00000003330LSM510064.835ENSIPUG00000021095LSM510064.835Ictalurus_punctatus
ENSSARG00000003330LSM59256.977ENSSTOG00000033886-9756.977Ictidomys_tridecemlineatus
ENSSARG00000003330LSM510071.429ENSSTOG00000012662LSM58097.872Ictidomys_tridecemlineatus
ENSSARG00000003330LSM510070.330ENSJJAG00000012145-10070.330Jaculus_jaculus
ENSSARG00000003330LSM56266.071ENSJJAG00000016144-5266.071Jaculus_jaculus
ENSSARG00000003330LSM56291.071ENSJJAG00000004475-7191.071Jaculus_jaculus
ENSSARG00000003330LSM510067.033ENSKMAG00000021861lsm510067.033Kryptolebias_marmoratus
ENSSARG00000003330LSM56278.571ENSLBEG00000017379lsm59278.571Labrus_bergylta
ENSSARG00000003330LSM510067.033ENSLACG00000022448LSM510067.033Latimeria_chalumnae
ENSSARG00000003330LSM510065.934ENSLOCG00000012903lsm510065.934Lepisosteus_oculatus
ENSSARG00000003330LSM510046.154ENSLAFG00000027938-10046.154Loxodonta_africana
ENSSARG00000003330LSM510071.429ENSLAFG00000029579LSM510071.429Loxodonta_africana
ENSSARG00000003330LSM510068.132ENSMFAG00000030152-10068.132Macaca_fascicularis
ENSSARG00000003330LSM510071.429ENSMFAG00000038508LSM510071.429Macaca_fascicularis
ENSSARG00000003330LSM55395.833ENSMFAG00000031187-8195.833Macaca_fascicularis
ENSSARG00000003330LSM510068.132ENSMMUG00000030131-10068.132Macaca_mulatta
ENSSARG00000003330LSM55790.385ENSMMUG00000045129-8190.385Macaca_mulatta
ENSSARG00000003330LSM59970.000ENSMMUG00000039822-10070.000Macaca_mulatta
ENSSARG00000003330LSM510071.429ENSMNEG00000015331LSM510071.429Macaca_nemestrina
ENSSARG00000003330LSM510068.132ENSMNEG00000037935-10068.132Macaca_nemestrina
ENSSARG00000003330LSM510071.429ENSMLEG00000024945LSM510071.429Mandrillus_leucophaeus
ENSSARG00000003330LSM59870.787ENSMLEG00000034037-8388.000Mandrillus_leucophaeus
ENSSARG00000003330LSM510064.835ENSMAMG00000012869lsm510064.835Mastacembelus_armatus
ENSSARG00000003330LSM59666.667ENSMZEG00005019554lsm59966.667Maylandia_zebra
ENSSARG00000003330LSM510070.330ENSMGAG00000012117LSM510070.330Meleagris_gallopavo
ENSSARG00000003330LSM510071.429ENSMAUG00000012222Lsm58097.872Mesocricetus_auratus
ENSSARG00000003330LSM510070.330ENSMAUG00000008132-10070.330Mesocricetus_auratus
ENSSARG00000003330LSM59948.889ENSMICG00000033928-9648.889Microcebus_murinus
ENSSARG00000003330LSM510071.429ENSMICG00000005353LSM510071.429Microcebus_murinus
ENSSARG00000003330LSM510071.429ENSMOCG00000012018Lsm58097.872Microtus_ochrogaster
ENSSARG00000003330LSM58464.474ENSMMOG00000004026lsm58764.474Mola_mola
ENSSARG00000003330LSM56859.677ENSMODG00000013274-10059.677Monodelphis_domestica
ENSSARG00000003330LSM56853.226ENSMALG00000010343lsm510053.226Monopterus_albus
ENSSARG00000003330LSM510071.429MGP_CAROLIEiJ_G0028421Lsm5100100.000Mus_caroli
ENSSARG00000003330LSM510071.429ENSMUSG00000091625Lsm5100100.000Mus_musculus
ENSSARG00000003330LSM510071.429MGP_PahariEiJ_G0022171Lsm5100100.000Mus_pahari
ENSSARG00000003330LSM510071.429MGP_SPRETEiJ_G0029423Lsm5100100.000Mus_spretus
ENSSARG00000003330LSM510071.429ENSMLUG00000017028LSM510071.429Myotis_lucifugus
ENSSARG00000003330LSM510060.215ENSNGAG00000017707-10060.215Nannospalax_galili
ENSSARG00000003330LSM510071.429ENSNGAG00000024142Lsm58097.872Nannospalax_galili
ENSSARG00000003330LSM59951.111ENSNGAG00000022569-9651.111Nannospalax_galili
ENSSARG00000003330LSM56352.632ENSNBRG00000011386lsm57652.632Neolamprologus_brichardi
ENSSARG00000003330LSM510071.429ENSNLEG00000015268LSM510071.429Nomascus_leucogenys
ENSSARG00000003330LSM58266.667ENSOPRG00000002443LSM510066.667Ochotona_princeps
ENSSARG00000003330LSM510071.429ENSODEG00000019072-10071.429Octodon_degus
ENSSARG00000003330LSM510071.429ENSODEG00000008258-10071.429Octodon_degus
ENSSARG00000003330LSM58246.667ENSOANG00000014540-10046.667Ornithorhynchus_anatinus
ENSSARG00000003330LSM510071.429ENSOCUG00000029043LSM510071.429Oryctolagus_cuniculus
ENSSARG00000003330LSM510064.835ENSORLG00000027725lsm55864.835Oryzias_latipes
ENSSARG00000003330LSM56291.071ENSORLG00020003019lsm55591.071Oryzias_latipes_hni
ENSSARG00000003330LSM510064.835ENSORLG00015003338lsm510064.835Oryzias_latipes_hsok
ENSSARG00000003330LSM510063.736ENSOMEG00000001078lsm510063.736Oryzias_melastigma
ENSSARG00000003330LSM510071.429ENSOGAG00000013892LSM510071.429Otolemur_garnettii
ENSSARG00000003330LSM510071.429ENSOARG00000006944LSM510071.429Ovis_aries
ENSSARG00000003330LSM510071.429ENSPPAG00000003697-10071.429Pan_paniscus
ENSSARG00000003330LSM510071.429ENSPPRG00000002550LSM510071.429Panthera_pardus
ENSSARG00000003330LSM510071.429ENSPTIG00000015604LSM510071.429Panthera_tigris_altaica
ENSSARG00000003330LSM510071.429ENSPTRG00000019057LSM510071.429Pan_troglodytes
ENSSARG00000003330LSM510062.637ENSPTRG00000049488-10062.637Pan_troglodytes
ENSSARG00000003330LSM510067.033ENSPANG00000033477-10067.033Papio_anubis
ENSSARG00000003330LSM59970.000ENSPANG00000032538-10070.000Papio_anubis
ENSSARG00000003330LSM510071.429ENSPANG00000032179-10071.429Papio_anubis
ENSSARG00000003330LSM510065.934ENSPKIG00000011910lsm510065.934Paramormyrops_kingsleyae
ENSSARG00000003330LSM58166.216ENSPSIG00000014796LSM510066.216Pelodiscus_sinensis
ENSSARG00000003330LSM56856.452ENSPMGG00000011699lsm510056.452Periophthalmus_magnuspinnatus
ENSSARG00000003330LSM55297.872ENSPEMG00000019994-8097.872Peromyscus_maniculatus_bairdii
ENSSARG00000003330LSM55574.000ENSPEMG00000022375-6174.000Peromyscus_maniculatus_bairdii
ENSSARG00000003330LSM510065.934ENSPFOG00000001433lsm510065.934Poecilia_formosa
ENSSARG00000003330LSM510065.934ENSPLAG00000009665lsm510065.934Poecilia_latipinna
ENSSARG00000003330LSM510065.934ENSPMEG00000022265lsm510065.934Poecilia_mexicana
ENSSARG00000003330LSM56856.452ENSPREG00000022452lsm510056.452Poecilia_reticulata
ENSSARG00000003330LSM510068.132ENSPPYG00000017661LSM510068.132Pongo_abelii
ENSSARG00000003330LSM56298.214ENSPCAG00000013740LSM56998.214Procavia_capensis
ENSSARG00000003330LSM510071.429ENSPVAG00000009786LSM510071.429Pteropus_vampyrus
ENSSARG00000003330LSM59666.667ENSPNYG00000022236lsm59966.667Pundamilia_nyererei
ENSSARG00000003330LSM510064.835ENSPNAG00000001887lsm510064.835Pygocentrus_nattereri
ENSSARG00000003330LSM510067.391ENSRNOG00000027305AABR07065089.110067.391Rattus_norvegicus
ENSSARG00000003330LSM510071.429ENSRNOG00000042126Lsm510071.429Rattus_norvegicus
ENSSARG00000003330LSM510071.429ENSRBIG00000027803-8388.889Rhinopithecus_bieti
ENSSARG00000003330LSM510071.429ENSRBIG00000030714-10071.429Rhinopithecus_bieti
ENSSARG00000003330LSM510071.429ENSRBIG00000030340-10071.429Rhinopithecus_bieti
ENSSARG00000003330LSM510071.429ENSRBIG00000024431-10071.429Rhinopithecus_bieti
ENSSARG00000003330LSM510071.429ENSRROG00000004655-10071.429Rhinopithecus_roxellana
ENSSARG00000003330LSM510071.429ENSRROG00000042782-8388.889Rhinopithecus_roxellana
ENSSARG00000003330LSM510071.429ENSRROG00000023884-10071.429Rhinopithecus_roxellana
ENSSARG00000003330LSM510071.429ENSSBOG00000012312LSM510071.429Saimiri_boliviensis_boliviensis
ENSSARG00000003330LSM510052.747ENSSBOG00000034794-10052.747Saimiri_boliviensis_boliviensis
ENSSARG00000003330LSM510069.231ENSSBOG00000019124-10069.231Saimiri_boliviensis_boliviensis
ENSSARG00000003330LSM510065.934ENSSFOG00015010099lsm510065.934Scleropages_formosus
ENSSARG00000003330LSM56856.452ENSSDUG00000010762lsm510056.452Seriola_dumerili
ENSSARG00000003330LSM55278.723ENSSLDG00000008014-5678.723Seriola_lalandi_dorsalis
ENSSARG00000003330LSM510065.934ENSSLDG00000025242lsm510065.934Seriola_lalandi_dorsalis
ENSSARG00000003330LSM510069.231ENSSPUG00000002690LSM510069.231Sphenodon_punctatus
ENSSARG00000003330LSM510071.429ENSSSCG00000026064-10071.429Sus_scrofa
ENSSARG00000003330LSM56287.500ENSSSCG00000029661-7887.500Sus_scrofa
ENSSARG00000003330LSM510068.132ENSTGUG00000017539LSM510068.132Taeniopygia_guttata
ENSSARG00000003330LSM59667.816ENSTNIG00000008695lsm59967.816Tetraodon_nigroviridis
ENSSARG00000003330LSM510071.429ENSTBEG00000004876LSM510071.429Tupaia_belangeri
ENSSARG00000003330LSM510071.429ENSTTRG00000004237LSM510071.429Tursiops_truncatus
ENSSARG00000003330LSM55790.385ENSUAMG00000009786LSM56890.385Ursus_americanus
ENSSARG00000003330LSM59971.111ENSUMAG00000002625LSM56571.111Ursus_maritimus
ENSSARG00000003330LSM510071.429ENSVPAG00000009985LSM510071.429Vicugna_pacos
ENSSARG00000003330LSM510071.429ENSVVUG00000021311LSM510071.429Vulpes_vulpes
ENSSARG00000003330LSM56292.857ENSXETG00000026465lsm56892.857Xenopus_tropicalis
ENSSARG00000003330LSM56856.452ENSXCOG00000015348lsm510056.452Xiphophorus_couchianus
ENSSARG00000003330LSM510065.934ENSXMAG00000029988lsm510065.934Xiphophorus_maculatus

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