EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000003584 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 115345 bases
Position: chrGeneScaffold_6366:601-115945
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003251	CMS1	PF14617.6	5.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003592	CMSS1-201	840	-	ENSSARP00000003251	279 (aa)	-	UPI00015817B2

Gene Model

Click here to download ENSSARG00000003584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003584	CMSS1	100	75.357	ENSG00000184220	CMSS1	99	90.123	Homo_sapiens
ENSSARG00000003584	CMSS1	72	51.485	ENSAPOG00000010604	cmss1	99	46.964	Acanthochromis_polyacanthus
ENSSARG00000003584	CMSS1	92	73.745	ENSAMEG00000004092	CMSS1	100	73.745	Ailuropoda_melanoleuca
ENSSARG00000003584	CMSS1	72	43.284	ENSACIG00000021854	cmss1	91	42.739	Amphilophus_citrinellus
ENSSARG00000003584	CMSS1	100	43.599	ENSAOCG00000013361	cmss1	100	43.667	Amphiprion_ocellaris
ENSSARG00000003584	CMSS1	100	43.448	ENSAPEG00000005829	cmss1	100	43.793	Amphiprion_percula
ENSSARG00000003584	CMSS1	100	43.960	ENSATEG00000008209	cmss1	100	46.021	Anabas_testudineus
ENSSARG00000003584	CMSS1	82	57.391	ENSAPLG00000010542	CMSS1	100	57.391	Anas_platyrhynchos
ENSSARG00000003584	CMSS1	83	58.228	ENSACAG00000011065	CMSS1	87	58.650	Anolis_carolinensis
ENSSARG00000003584	CMSS1	100	73.665	ENSANAG00000023565	CMSS1	100	73.665	Aotus_nancymaae
ENSSARG00000003584	CMSS1	100	42.193	ENSACLG00000027294	cmss1	100	44.330	Astatotilapia_calliptera
ENSSARG00000003584	CMSS1	100	39.057	ENSAMXG00000002046	cmss1	100	40.404	Astyanax_mexicanus
ENSSARG00000003584	CMSS1	100	74.286	ENSBTAG00000013663	CMSS1	100	74.286	Bos_taurus
ENSSARG00000003584	CMSS1	100	73.310	ENSCJAG00000000610	CMSS1	100	73.310	Callithrix_jacchus
ENSSARG00000003584	CMSS1	95	72.659	ENSCAFG00000009230	CMSS1	97	72.659	Canis_familiaris
ENSSARG00000003584	CMSS1	82	67.241	ENSCAFG00020024156	-	72	67.241	Canis_lupus_dingo
ENSSARG00000003584	CMSS1	92	74.131	ENSCAFG00020009464	-	95	74.131	Canis_lupus_dingo
ENSSARG00000003584	CMSS1	92	74.319	ENSCHIG00000013003	CMSS1	99	71.691	Capra_hircus
ENSSARG00000003584	CMSS1	96	69.853	ENSTSYG00000009266	CMSS1	99	72.093	Carlito_syrichta
ENSSARG00000003584	CMSS1	80	57.759	ENSCAPG00000013584	CMSS1	88	59.596	Cavia_aperea
ENSSARG00000003584	CMSS1	100	73.929	ENSCPOG00000014680	CMSS1	100	73.929	Cavia_porcellus
ENSSARG00000003584	CMSS1	100	74.733	ENSCCAG00000034685	CMSS1	100	74.733	Cebus_capucinus
ENSSARG00000003584	CMSS1	100	74.643	ENSCATG00000031980	CMSS1	100	74.643	Cercocebus_atys
ENSSARG00000003584	CMSS1	82	76.419	ENSCLAG00000011241	CMSS1	98	76.419	Chinchilla_lanigera
ENSSARG00000003584	CMSS1	87	75.918	ENSCSAG00000006024	CMSS1	100	75.918	Chlorocebus_sabaeus
ENSSARG00000003584	CMSS1	100	55.714	ENSCHOG00000012098	CMSS1	100	55.714	Choloepus_hoffmanni
ENSSARG00000003584	CMSS1	70	31.500	ENSCING00000014848	-	100	32.086	Ciona_intestinalis
ENSSARG00000003584	CMSS1	100	74.643	ENSCANG00000031337	CMSS1	100	74.643	Colobus_angolensis_palliatus
ENSSARG00000003584	CMSS1	100	67.972	ENSCGRG00001014305	Cmss1	100	67.972	Cricetulus_griseus_chok1gshd
ENSSARG00000003584	CMSS1	91	68.482	ENSCGRG00000006722	Cmss1	100	68.482	Cricetulus_griseus_crigri
ENSSARG00000003584	CMSS1	100	39.667	ENSCSEG00000004958	cmss1	100	41.156	Cynoglossus_semilaevis
ENSSARG00000003584	CMSS1	100	43.448	ENSCVAG00000005039	cmss1	100	43.403	Cyprinodon_variegatus
ENSSARG00000003584	CMSS1	100	38.206	ENSDARG00000112579	cmss1	100	39.597	Danio_rerio
ENSSARG00000003584	CMSS1	93	70.229	ENSDNOG00000040418	CMSS1	92	70.656	Dasypus_novemcinctus
ENSSARG00000003584	CMSS1	100	71.429	ENSDORG00000010461	Cmss1	100	71.429	Dipodomys_ordii
ENSSARG00000003584	CMSS1	82	74.236	ENSEASG00005010966	CMSS1	99	73.973	Equus_asinus_asinus
ENSSARG00000003584	CMSS1	92	72.763	ENSECAG00000015662	CMSS1	99	73.894	Equus_caballus
ENSSARG00000003584	CMSS1	100	45.000	ENSEEUG00000007624	-	100	44.643	Erinaceus_europaeus
ENSSARG00000003584	CMSS1	100	41.333	ENSELUG00000019459	cmss1	100	41.000	Esox_lucius
ENSSARG00000003584	CMSS1	100	76.429	ENSFCAG00000044577	CMSS1	100	76.429	Felis_catus
ENSSARG00000003584	CMSS1	82	55.459	ENSFALG00000005816	CMSS1	97	55.459	Ficedula_albicollis
ENSSARG00000003584	CMSS1	81	73.684	ENSFDAG00000012577	CMSS1	100	73.684	Fukomys_damarensis
ENSSARG00000003584	CMSS1	81	48.918	ENSFHEG00000012008	cmss1	95	48.918	Fundulus_heteroclitus
ENSSARG00000003584	CMSS1	99	44.251	ENSGMOG00000016729	cmss1	100	45.296	Gadus_morhua
ENSSARG00000003584	CMSS1	84	57.627	ENSGALG00000015267	CMSS1	90	57.627	Gallus_gallus
ENSSARG00000003584	CMSS1	75	52.133	ENSGAFG00000021217	cmss1	77	52.970	Gambusia_affinis
ENSSARG00000003584	CMSS1	99	41.935	ENSGACG00000002798	cmss1	100	41.935	Gasterosteus_aculeatus
ENSSARG00000003584	CMSS1	85	59.494	ENSGAGG00000019861	CMSS1	92	59.494	Gopherus_agassizii
ENSSARG00000003584	CMSS1	93	74.615	ENSGGOG00000014125	CMSS1	99	74.806	Gorilla_gorilla
ENSSARG00000003584	CMSS1	100	42.333	ENSHBUG00000008431	cmss1	100	44.138	Haplochromis_burtoni
ENSSARG00000003584	CMSS1	90	70.356	ENSHGLG00000019481	CMSS1	100	70.356	Heterocephalus_glaber_female
ENSSARG00000003584	CMSS1	92	70.039	ENSHGLG00100010314	CMSS1	100	70.039	Heterocephalus_glaber_male
ENSSARG00000003584	CMSS1	100	42.623	ENSHCOG00000003222	cmss1	100	42.904	Hippocampus_comes
ENSSARG00000003584	CMSS1	100	40.690	ENSIPUG00000011591	cmss1	100	40.136	Ictalurus_punctatus
ENSSARG00000003584	CMSS1	100	74.643	ENSSTOG00000019366	CMSS1	100	74.643	Ictidomys_tridecemlineatus
ENSSARG00000003584	CMSS1	100	70.000	ENSJJAG00000014894	Cmss1	100	70.000	Jaculus_jaculus
ENSSARG00000003584	CMSS1	72	42.289	ENSKMAG00000002390	cmss1	81	42.289	Kryptolebias_marmoratus
ENSSARG00000003584	CMSS1	72	48.276	ENSLBEG00000006298	cmss1	83	48.276	Labrus_bergylta
ENSSARG00000003584	CMSS1	81	51.304	ENSLACG00000009293	CMSS1	100	51.304	Latimeria_chalumnae
ENSSARG00000003584	CMSS1	100	41.463	ENSLOCG00000009391	cmss1	100	42.958	Lepisosteus_oculatus
ENSSARG00000003584	CMSS1	81	74.123	ENSLAFG00000017509	CMSS1	100	74.123	Loxodonta_africana
ENSSARG00000003584	CMSS1	100	75.357	ENSMFAG00000045006	CMSS1	100	75.357	Macaca_fascicularis
ENSSARG00000003584	CMSS1	100	75.000	ENSMMUG00000002939	CMSS1	100	75.000	Macaca_mulatta
ENSSARG00000003584	CMSS1	100	75.357	ENSMNEG00000031315	CMSS1	100	75.357	Macaca_nemestrina
ENSSARG00000003584	CMSS1	100	74.643	ENSMLEG00000033660	CMSS1	100	74.643	Mandrillus_leucophaeus
ENSSARG00000003584	CMSS1	100	43.624	ENSMAMG00000017176	cmss1	100	43.960	Mastacembelus_armatus
ENSSARG00000003584	CMSS1	100	42.193	ENSMZEG00005021886	cmss1	100	44.330	Maylandia_zebra
ENSSARG00000003584	CMSS1	81	57.018	ENSMGAG00000014360	CMSS1	100	57.018	Meleagris_gallopavo
ENSSARG00000003584	CMSS1	100	48.029	ENSMAUG00000020609	Cmss1	100	50.538	Mesocricetus_auratus
ENSSARG00000003584	CMSS1	100	73.571	ENSMICG00000048977	CMSS1	100	73.571	Microcebus_murinus
ENSSARG00000003584	CMSS1	100	67.143	ENSMOCG00000021937	Cmss1	100	67.143	Microtus_ochrogaster
ENSSARG00000003584	CMSS1	72	50.495	ENSMMOG00000019794	cmss1	84	50.495	Mola_mola
ENSSARG00000003584	CMSS1	94	64.122	ENSMODG00000002275	CMSS1	98	64.122	Monodelphis_domestica
ENSSARG00000003584	CMSS1	100	43.299	ENSMALG00000004250	cmss1	100	42.809	Monopterus_albus
ENSSARG00000003584	CMSS1	100	67.972	MGP_CAROLIEiJ_G0020824	Cmss1	100	67.972	Mus_caroli
ENSSARG00000003584	CMSS1	100	68.683	ENSMUSG00000022748	Cmss1	100	68.683	Mus_musculus
ENSSARG00000003584	CMSS1	100	66.904	MGP_PahariEiJ_G0016524	Cmss1	100	66.904	Mus_pahari
ENSSARG00000003584	CMSS1	100	67.972	MGP_SPRETEiJ_G0021724	Cmss1	100	67.972	Mus_spretus
ENSSARG00000003584	CMSS1	87	77.459	ENSMPUG00000011324	CMSS1	99	75.676	Mustela_putorius_furo
ENSSARG00000003584	CMSS1	92	74.615	ENSMLUG00000001131	CMSS1	99	74.615	Myotis_lucifugus
ENSSARG00000003584	CMSS1	100	70.000	ENSNGAG00000020316	Cmss1	100	70.000	Nannospalax_galili
ENSSARG00000003584	CMSS1	100	42.955	ENSNBRG00000003095	cmss1	100	43.986	Neolamprologus_brichardi
ENSSARG00000003584	CMSS1	100	75.357	ENSNLEG00000034172	CMSS1	100	75.357	Nomascus_leucogenys
ENSSARG00000003584	CMSS1	81	78.509	ENSMEUG00000014505	CMSS1	100	78.509	Notamacropus_eugenii
ENSSARG00000003584	CMSS1	100	75.357	ENSOPRG00000002986	CMSS1	100	75.357	Ochotona_princeps
ENSSARG00000003584	CMSS1	100	67.021	ENSODEG00000003558	-	100	67.021	Octodon_degus
ENSSARG00000003584	CMSS1	100	70.357	ENSODEG00000005226	-	100	70.357	Octodon_degus
ENSSARG00000003584	CMSS1	100	57.143	ENSODEG00000009446	-	100	57.143	Octodon_degus
ENSSARG00000003584	CMSS1	100	60.000	ENSODEG00000001853	-	100	60.000	Octodon_degus
ENSSARG00000003584	CMSS1	79	49.115	ENSONIG00000006678	cmss1	93	47.521	Oreochromis_niloticus
ENSSARG00000003584	CMSS1	91	61.004	ENSOANG00000007529	CMSS1	100	61.373	Ornithorhynchus_anatinus
ENSSARG00000003584	CMSS1	97	73.091	ENSOCUG00000025366	CMSS1	99	73.091	Oryctolagus_cuniculus
ENSSARG00000003584	CMSS1	100	43.478	ENSORLG00000020340	cmss1	100	45.965	Oryzias_latipes
ENSSARG00000003584	CMSS1	75	46.445	ENSORLG00020012235	cmss1	85	46.535	Oryzias_latipes_hni
ENSSARG00000003584	CMSS1	72	45.545	ENSORLG00015015551	cmss1	75	45.545	Oryzias_latipes_hsok
ENSSARG00000003584	CMSS1	100	43.729	ENSOMEG00000012555	cmss1	100	45.329	Oryzias_melastigma
ENSSARG00000003584	CMSS1	81	75.000	ENSOGAG00000002045	CMSS1	100	75.000	Otolemur_garnettii
ENSSARG00000003584	CMSS1	92	74.419	ENSOARG00000017899	CMSS1	89	74.419	Ovis_aries
ENSSARG00000003584	CMSS1	92	75.581	ENSPPAG00000038515	CMSS1	99	72.694	Pan_paniscus
ENSSARG00000003584	CMSS1	100	76.071	ENSPPRG00000016767	CMSS1	100	76.071	Panthera_pardus
ENSSARG00000003584	CMSS1	100	76.071	ENSPTIG00000018274	CMSS1	100	76.071	Panthera_tigris_altaica
ENSSARG00000003584	CMSS1	100	74.643	ENSPTRG00000015157	CMSS1	100	75.102	Pan_troglodytes
ENSSARG00000003584	CMSS1	92	72.868	ENSPANG00000019980	CMSS1	99	72.868	Papio_anubis
ENSSARG00000003584	CMSS1	80	52.863	ENSPKIG00000012609	cmss1	91	47.794	Paramormyrops_kingsleyae
ENSSARG00000003584	CMSS1	82	60.699	ENSPSIG00000003849	CMSS1	100	60.699	Pelodiscus_sinensis
ENSSARG00000003584	CMSS1	52	60.959	ENSPMGG00000010286	cmss1	64	60.959	Periophthalmus_magnuspinnatus
ENSSARG00000003584	CMSS1	100	67.857	ENSPEMG00000016384	Cmss1	100	67.857	Peromyscus_maniculatus_bairdii
ENSSARG00000003584	CMSS1	73	41.667	ENSPMAG00000001146	cmss1	99	42.079	Petromyzon_marinus
ENSSARG00000003584	CMSS1	89	66.935	ENSPCIG00000015656	CMSS1	94	66.935	Phascolarctos_cinereus
ENSSARG00000003584	CMSS1	100	44.056	ENSPFOG00000016849	cmss1	100	44.755	Poecilia_formosa
ENSSARG00000003584	CMSS1	100	44.056	ENSPLAG00000008323	cmss1	100	44.755	Poecilia_latipinna
ENSSARG00000003584	CMSS1	100	44.097	ENSPMEG00000021020	cmss1	100	45.329	Poecilia_mexicana
ENSSARG00000003584	CMSS1	72	51.980	ENSPREG00000007618	cmss1	69	51.980	Poecilia_reticulata
ENSSARG00000003584	CMSS1	100	75.000	ENSPPYG00000013606	CMSS1	100	75.000	Pongo_abelii
ENSSARG00000003584	CMSS1	100	75.357	ENSPCOG00000020035	CMSS1	100	75.357	Propithecus_coquereli
ENSSARG00000003584	CMSS1	100	85.000	ENSPVAG00000017031	CMSS1	100	85.000	Pteropus_vampyrus
ENSSARG00000003584	CMSS1	80	49.145	ENSPNYG00000013428	cmss1	86	50.000	Pundamilia_nyererei
ENSSARG00000003584	CMSS1	100	39.274	ENSPNAG00000007912	cmss1	100	39.274	Pygocentrus_nattereri
ENSSARG00000003584	CMSS1	92	67.181	ENSRNOG00000027888	Cmss1	99	67.181	Rattus_norvegicus
ENSSARG00000003584	CMSS1	100	74.643	ENSRBIG00000037931	CMSS1	100	74.643	Rhinopithecus_bieti
ENSSARG00000003584	CMSS1	100	74.643	ENSRROG00000042910	CMSS1	100	74.643	Rhinopithecus_roxellana
ENSSARG00000003584	CMSS1	92	74.517	ENSSBOG00000030980	CMSS1	99	74.517	Saimiri_boliviensis_boliviensis
ENSSARG00000003584	CMSS1	88	64.940	ENSSHAG00000009321	CMSS1	99	64.940	Sarcophilus_harrisii
ENSSARG00000003584	CMSS1	100	42.712	ENSSFOG00015001509	cmss1	100	43.793	Scleropages_formosus
ENSSARG00000003584	CMSS1	100	43.537	ENSSMAG00000001653	cmss1	100	44.330	Scophthalmus_maximus
ENSSARG00000003584	CMSS1	100	44.097	ENSSDUG00000007719	cmss1	100	45.734	Seriola_dumerili
ENSSARG00000003584	CMSS1	74	51.208	ENSSLDG00000012300	cmss1	90	52.074	Seriola_lalandi_dorsalis
ENSSARG00000003584	CMSS1	81	57.522	ENSSPUG00000003865	CMSS1	100	57.522	Sphenodon_punctatus
ENSSARG00000003584	CMSS1	91	45.660	ENSSPAG00000019182	cmss1	82	45.660	Stegastes_partitus
ENSSARG00000003584	CMSS1	100	76.071	ENSSSCG00000011970	CMSS1	100	76.071	Sus_scrofa
ENSSARG00000003584	CMSS1	82	55.459	ENSTGUG00000013635	CMSS1	100	55.459	Taeniopygia_guttata
ENSSARG00000003584	CMSS1	100	41.118	ENSTRUG00000015265	cmss1	100	43.706	Takifugu_rubripes
ENSSARG00000003584	CMSS1	72	49.010	ENSTNIG00000002880	cmss1	73	49.010	Tetraodon_nigroviridis
ENSSARG00000003584	CMSS1	81	59.434	ENSTBEG00000016722	CMSS1	80	59.434	Tupaia_belangeri
ENSSARG00000003584	CMSS1	100	72.143	ENSTTRG00000001562	CMSS1	100	72.143	Tursiops_truncatus
ENSSARG00000003584	CMSS1	97	72.161	ENSUAMG00000024209	CMSS1	100	75.336	Ursus_americanus
ENSSARG00000003584	CMSS1	95	73.408	ENSUMAG00000001983	CMSS1	99	75.194	Ursus_maritimus
ENSSARG00000003584	CMSS1	100	53.214	ENSVPAG00000000263	CMSS1	100	53.214	Vicugna_pacos
ENSSARG00000003584	CMSS1	77	73.733	ENSVVUG00000007776	-	80	74.257	Vulpes_vulpes
ENSSARG00000003584	CMSS1	88	75.203	ENSVVUG00000021647	-	100	75.203	Vulpes_vulpes
ENSSARG00000003584	CMSS1	100	44.326	ENSXETG00000011858	cmss1	100	44.326	Xenopus_tropicalis
ENSSARG00000003584	CMSS1	74	51.923	ENSXCOG00000018724	cmss1	69	51.980	Xiphophorus_couchianus
ENSSARG00000003584	CMSS1	74	51.923	ENSXMAG00000011243	cmss1	76	51.980	Xiphophorus_maculatus