EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000003786 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 12176 bases
Position: chrGeneScaffold_3344:8178-20353
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003484	Anticodon_1	PF08264.13	7e-09	1	1
ENSSARP00000003484	tRNA-synt_1	PF00133.22	1.8e-91	1	2
ENSSARP00000003484	tRNA-synt_1	PF00133.22	1.8e-91	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003849	-	2604	-	ENSSARP00000003484	868 (aa)	-	UPI00015806FE

Gene Model

Click here to download ENSSARG00000003786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003786	-	61	58.519	ENSAPOG00000007396	vars2	51	58.519	Acanthochromis_polyacanthus
ENSSARG00000003786	-	69	90.511	ENSAMEG00000012997	VARS2	56	90.511	Ailuropoda_melanoleuca
ENSSARG00000003786	-	60	59.259	ENSACIG00000004344	vars2	50	59.259	Amphilophus_citrinellus
ENSSARG00000003786	-	61	57.037	ENSAOCG00000000476	vars2	51	57.037	Amphiprion_ocellaris
ENSSARG00000003786	-	61	59.259	ENSATEG00000012291	vars2	50	59.259	Anabas_testudineus
ENSSARG00000003786	-	61	69.403	ENSACAG00000022093	VARS2	50	69.403	Anolis_carolinensis
ENSSARG00000003786	-	70	92.701	ENSANAG00000038018	VARS2	57	92.701	Aotus_nancymaae
ENSSARG00000003786	-	61	60.000	ENSAMXG00000017773	vars2	53	60.000	Astyanax_mexicanus
ENSSARG00000003786	-	68	93.431	ENSBTAG00000010698	VARS2	57	93.431	Bos_taurus
ENSSARG00000003786	-	70	89.051	ENSCJAG00000019826	VARS2	57	89.051	Callithrix_jacchus
ENSSARG00000003786	-	69	86.131	ENSCAFG00000000454	VARS2	57	86.131	Canis_familiaris
ENSSARG00000003786	-	61	86.131	ENSCAFG00020019387	VARS2	55	86.131	Canis_lupus_dingo
ENSSARG00000003786	-	69	92.701	ENSCHIG00000007847	VARS2	57	92.701	Capra_hircus
ENSSARG00000003786	-	70	89.781	ENSTSYG00000009904	VARS2	57	89.781	Carlito_syrichta
ENSSARG00000003786	-	69	86.861	ENSCAPG00000017770	VARS2	65	86.861	Cavia_aperea
ENSSARG00000003786	-	69	86.861	ENSCPOG00000021834	VARS2	57	86.861	Cavia_porcellus
ENSSARG00000003786	-	70	92.701	ENSCCAG00000037907	VARS2	57	92.701	Cebus_capucinus
ENSSARG00000003786	-	70	90.511	ENSCATG00000032554	VARS2	57	90.511	Cercocebus_atys
ENSSARG00000003786	-	69	87.591	ENSCLAG00000002889	VARS2	57	87.591	Chinchilla_lanigera
ENSSARG00000003786	-	70	89.781	ENSCSAG00000008327	VARS2	57	89.781	Chlorocebus_sabaeus
ENSSARG00000003786	-	61	70.370	ENSCPBG00000021502	VARS2	57	69.630	Chrysemys_picta_bellii
ENSSARG00000003786	-	70	90.511	ENSCANG00000014991	VARS2	57	90.511	Colobus_angolensis_palliatus
ENSSARG00000003786	-	69	83.212	ENSCGRG00001021535	Vars2	57	83.212	Cricetulus_griseus_chok1gshd
ENSSARG00000003786	-	69	83.212	ENSCGRG00000014112	Vars2	57	83.212	Cricetulus_griseus_crigri
ENSSARG00000003786	-	65	88.462	ENSDORG00000008516	Vars2	67	88.462	Dipodomys_ordii
ENSSARG00000003786	-	69	86.131	ENSETEG00000014844	VARS2	57	86.131	Echinops_telfairi
ENSSARG00000003786	-	69	90.511	ENSEASG00005019997	VARS2	57	90.511	Equus_asinus_asinus
ENSSARG00000003786	-	69	90.511	ENSECAG00000018202	VARS2	57	90.511	Equus_caballus
ENSSARG00000003786	-	63	81.373	ENSEEUG00000012591	-	52	81.373	Erinaceus_europaeus
ENSSARG00000003786	-	61	60.741	ENSELUG00000017824	vars2	51	60.741	Esox_lucius
ENSSARG00000003786	-	69	89.781	ENSFCAG00000010531	VARS2	57	89.781	Felis_catus
ENSSARG00000003786	-	70	85.401	ENSFDAG00000017216	VARS2	57	85.401	Fukomys_damarensis
ENSSARG00000003786	-	61	60.741	ENSGMOG00000018960	vars2	55	60.741	Gadus_morhua
ENSSARG00000003786	-	52	55.128	ENSGAFG00000004737	vars2	50	55.128	Gambusia_affinis
ENSSARG00000003786	-	60	61.481	ENSGACG00000001464	vars2	53	61.481	Gasterosteus_aculeatus
ENSSARG00000003786	-	67	68.889	ENSGAGG00000011652	VARS2	61	68.889	Gopherus_agassizii
ENSSARG00000003786	-	70	89.781	ENSGGOG00000014587	VARS2	57	89.781	Gorilla_gorilla
ENSSARG00000003786	-	59	58.519	ENSHBUG00000002448	vars2	50	58.519	Haplochromis_burtoni
ENSSARG00000003786	-	69	83.212	ENSHGLG00000012886	VARS2	55	83.212	Heterocephalus_glaber_female
ENSSARG00000003786	-	69	82.482	ENSHGLG00100016535	VARS2	58	82.482	Heterocephalus_glaber_male
ENSSARG00000003786	-	61	60.000	ENSIPUG00000015573	Vars2	50	60.000	Ictalurus_punctatus
ENSSARG00000003786	-	69	88.889	ENSSTOG00000009924	VARS2	57	88.889	Ictidomys_tridecemlineatus
ENSSARG00000003786	-	69	86.667	ENSJJAG00000011144	Vars2	57	86.667	Jaculus_jaculus
ENSSARG00000003786	-	61	58.519	ENSKMAG00000001393	vars2	51	58.519	Kryptolebias_marmoratus
ENSSARG00000003786	-	59	60.345	ENSLBEG00000011949	vars2	50	60.345	Labrus_bergylta
ENSSARG00000003786	-	58	51.053	ENSLACG00000001576	-	50	51.053	Latimeria_chalumnae
ENSSARG00000003786	-	68	86.861	ENSLAFG00000015183	VARS2	57	86.861	Loxodonta_africana
ENSSARG00000003786	-	70	90.511	ENSMFAG00000042367	VARS2	57	90.511	Macaca_fascicularis
ENSSARG00000003786	-	70	90.511	ENSMMUG00000018609	VARS2	57	90.511	Macaca_mulatta
ENSSARG00000003786	-	70	91.241	ENSMNEG00000043163	VARS2	57	91.241	Macaca_nemestrina
ENSSARG00000003786	-	70	91.241	ENSMLEG00000041728	VARS2	56	91.241	Mandrillus_leucophaeus
ENSSARG00000003786	-	60	57.037	ENSMAMG00000020339	vars2	50	57.037	Mastacembelus_armatus
ENSSARG00000003786	-	69	86.861	ENSMAUG00000018946	Vars2	57	86.861	Mesocricetus_auratus
ENSSARG00000003786	-	61	91.241	ENSMICG00000005365	VARS2	60	91.241	Microcebus_murinus
ENSSARG00000003786	-	65	85.401	ENSMOCG00000014607	Vars2	57	85.401	Microtus_ochrogaster
ENSSARG00000003786	-	61	61.481	ENSMMOG00000012122	vars2	51	61.481	Mola_mola
ENSSARG00000003786	-	69	83.212	ENSMODG00000015848	VARS2	56	83.212	Monodelphis_domestica
ENSSARG00000003786	-	59	57.983	ENSMALG00000009217	vars2	53	56.716	Monopterus_albus
ENSSARG00000003786	-	69	85.401	MGP_CAROLIEiJ_G0021529	Vars2	57	85.401	Mus_caroli
ENSSARG00000003786	-	69	84.672	ENSMUSG00000038838	Vars2	57	84.672	Mus_musculus
ENSSARG00000003786	-	69	85.401	MGP_PahariEiJ_G0020523	Vars2	57	85.401	Mus_pahari
ENSSARG00000003786	-	69	86.131	MGP_SPRETEiJ_G0022436	Vars2	57	86.131	Mus_spretus
ENSSARG00000003786	-	69	89.051	ENSMPUG00000011643	VARS2	57	89.051	Mustela_putorius_furo
ENSSARG00000003786	-	69	90.511	ENSMLUG00000002356	VARS2	56	90.511	Myotis_lucifugus
ENSSARG00000003786	-	69	69.095	ENSNGAG00000020607	Vars2	56	69.095	Nannospalax_galili
ENSSARG00000003786	-	70	90.511	ENSNLEG00000005625	VARS2	56	90.511	Nomascus_leucogenys
ENSSARG00000003786	-	69	87.591	ENSODEG00000017965	VARS2	57	87.591	Octodon_degus
ENSSARG00000003786	-	51	96.970	ENSOANG00000000398	-	56	96.970	Ornithorhynchus_anatinus
ENSSARG00000003786	-	70	87.770	ENSOGAG00000006087	VARS2	56	87.770	Otolemur_garnettii
ENSSARG00000003786	-	69	87.681	ENSOARG00000010844	VARS2	56	87.681	Ovis_aries
ENSSARG00000003786	-	70	88.321	ENSPPAG00000041141	VARS2	57	88.321	Pan_paniscus
ENSSARG00000003786	-	69	90.511	ENSPPRG00000006751	VARS2	55	90.511	Panthera_pardus
ENSSARG00000003786	-	69	90.511	ENSPTIG00000017799	VARS2	60	90.511	Panthera_tigris_altaica
ENSSARG00000003786	-	70	88.321	ENSPTRG00000034497	VARS2	57	88.321	Pan_troglodytes
ENSSARG00000003786	-	70	91.241	ENSPANG00000018481	VARS2	57	91.241	Papio_anubis
ENSSARG00000003786	-	53	71.111	ENSPSIG00000006206	VARS2	72	71.111	Pelodiscus_sinensis
ENSSARG00000003786	-	61	62.222	ENSPMGG00000000465	vars2	51	62.222	Periophthalmus_magnuspinnatus
ENSSARG00000003786	-	68	85.401	ENSPEMG00000014691	Vars2	56	85.401	Peromyscus_maniculatus_bairdii
ENSSARG00000003786	-	69	83.942	ENSPCIG00000015040	VARS2	57	88.000	Phascolarctos_cinereus
ENSSARG00000003786	-	70	90.511	ENSPPYG00000016424	VARS2	57	90.511	Pongo_abelii
ENSSARG00000003786	-	70	89.051	ENSPCOG00000014839	VARS2	56	89.051	Propithecus_coquereli
ENSSARG00000003786	-	70	90.511	ENSPVAG00000004197	VARS2	57	90.511	Pteropus_vampyrus
ENSSARG00000003786	-	61	60.000	ENSPNAG00000026793	vars2	50	60.000	Pygocentrus_nattereri
ENSSARG00000003786	-	69	85.401	ENSRNOG00000000833	Vars2	57	85.401	Rattus_norvegicus
ENSSARG00000003786	-	70	91.241	ENSRBIG00000032725	VARS2	57	91.241	Rhinopithecus_bieti
ENSSARG00000003786	-	70	91.241	ENSRROG00000043847	VARS2	59	91.241	Rhinopithecus_roxellana
ENSSARG00000003786	-	70	91.241	ENSSBOG00000033240	VARS2	57	91.241	Saimiri_boliviensis_boliviensis
ENSSARG00000003786	-	69	88.321	ENSSHAG00000009307	VARS2	57	88.321	Sarcophilus_harrisii
ENSSARG00000003786	-	61	60.741	ENSSFOG00015016187	vars2	50	60.741	Scleropages_formosus
ENSSARG00000003786	-	61	61.481	ENSSMAG00000020842	vars2	50	61.481	Scophthalmus_maximus
ENSSARG00000003786	-	61	62.222	ENSSDUG00000011598	vars2	51	62.222	Seriola_dumerili
ENSSARG00000003786	-	61	62.222	ENSSLDG00000015492	vars2	51	62.222	Seriola_lalandi_dorsalis
ENSSARG00000003786	-	61	68.148	ENSSPUG00000014700	VARS2	55	68.148	Sphenodon_punctatus
ENSSARG00000003786	-	60	57.778	ENSSPAG00000004654	vars2	51	57.778	Stegastes_partitus
ENSSARG00000003786	-	69	89.051	ENSSSCG00000001384	VARS2	57	89.051	Sus_scrofa
ENSSARG00000003786	-	61	59.259	ENSTRUG00000005264	vars2	51	59.259	Takifugu_rubripes
ENSSARG00000003786	-	61	61.940	ENSTNIG00000005916	vars2	50	61.940	Tetraodon_nigroviridis
ENSSARG00000003786	-	70	89.781	ENSUAMG00000026124	VARS2	66	89.781	Ursus_americanus
ENSSARG00000003786	-	69	89.781	ENSUMAG00000019894	VARS2	57	89.781	Ursus_maritimus
ENSSARG00000003786	-	69	86.131	ENSVVUG00000010754	VARS2	54	86.131	Vulpes_vulpes
ENSSARG00000003786	-	57	53.619	ENSXETG00000003036	vars2	53	53.619	Xenopus_tropicalis