EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000003907 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 31033 bases
Position: chrGeneScaffold_6123:12322-43354
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003540	LSM14	PF12701.7	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003906	EDC3-201	1521	-	ENSSARP00000003540	506 (aa)	-	UPI0001580CB7

Gene Model

Click here to download ENSSARG00000003907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003907	EDC3	80	95.565	ENSG00000179151	EDC3	100	93.750	Homo_sapiens
ENSSARG00000003907	EDC3	80	79.839	ENSAPOG00000010791	edc3	79	79.839	Acanthochromis_polyacanthus
ENSSARG00000003907	EDC3	68	73.128	ENSAPOG00000008655	EDC3	61	73.134	Acanthochromis_polyacanthus
ENSSARG00000003907	EDC3	80	95.161	ENSAMEG00000008963	EDC3	81	95.161	Ailuropoda_melanoleuca
ENSSARG00000003907	EDC3	80	78.226	ENSACIG00000017751	edc3	79	78.226	Amphilophus_citrinellus
ENSSARG00000003907	EDC3	66	76.518	ENSACIG00000005330	EDC3	63	76.518	Amphilophus_citrinellus
ENSSARG00000003907	EDC3	80	79.839	ENSAOCG00000005431	edc3	79	79.839	Amphiprion_ocellaris
ENSSARG00000003907	EDC3	72	73.387	ENSAOCG00000009103	-	78	73.387	Amphiprion_ocellaris
ENSSARG00000003907	EDC3	80	79.839	ENSAPEG00000000968	edc3	79	79.839	Amphiprion_percula
ENSSARG00000003907	EDC3	62	76.119	ENSAPEG00000007841	EDC3	66	76.119	Amphiprion_percula
ENSSARG00000003907	EDC3	80	80.242	ENSATEG00000015505	edc3	79	80.242	Anabas_testudineus
ENSSARG00000003907	EDC3	79	73.790	ENSATEG00000004205	-	88	73.790	Anabas_testudineus
ENSSARG00000003907	EDC3	70	89.516	ENSAPLG00000008957	EDC3	78	89.516	Anas_platyrhynchos
ENSSARG00000003907	EDC3	58	88.321	ENSACAG00000000460	-	75	88.321	Anolis_carolinensis
ENSSARG00000003907	EDC3	80	96.774	ENSANAG00000024078	EDC3	81	96.774	Aotus_nancymaae
ENSSARG00000003907	EDC3	73	75.304	ENSACLG00000018776	-	82	75.304	Astatotilapia_calliptera
ENSSARG00000003907	EDC3	80	77.823	ENSACLG00000007232	edc3	79	77.823	Astatotilapia_calliptera
ENSSARG00000003907	EDC3	80	81.855	ENSAMXG00000001589	edc3	80	81.855	Astyanax_mexicanus
ENSSARG00000003907	EDC3	80	95.565	ENSBTAG00000007308	EDC3	81	95.565	Bos_taurus
ENSSARG00000003907	EDC3	80	96.371	ENSCJAG00000017681	EDC3	81	96.371	Callithrix_jacchus
ENSSARG00000003907	EDC3	80	95.161	ENSCAFG00000017935	EDC3	81	95.161	Canis_familiaris
ENSSARG00000003907	EDC3	80	95.161	ENSCAFG00020003909	EDC3	81	95.161	Canis_lupus_dingo
ENSSARG00000003907	EDC3	80	96.371	ENSCHIG00000023658	EDC3	81	96.371	Capra_hircus
ENSSARG00000003907	EDC3	80	96.774	ENSTSYG00000004822	EDC3	81	96.774	Carlito_syrichta
ENSSARG00000003907	EDC3	80	96.371	ENSCPOG00000015595	EDC3	81	96.371	Cavia_porcellus
ENSSARG00000003907	EDC3	80	96.371	ENSCCAG00000021663	EDC3	81	96.371	Cebus_capucinus
ENSSARG00000003907	EDC3	80	96.371	ENSCATG00000037511	EDC3	81	96.371	Cercocebus_atys
ENSSARG00000003907	EDC3	80	95.968	ENSCLAG00000005700	EDC3	81	95.968	Chinchilla_lanigera
ENSSARG00000003907	EDC3	80	96.371	ENSCSAG00000014239	EDC3	81	96.371	Chlorocebus_sabaeus
ENSSARG00000003907	EDC3	80	89.516	ENSCPBG00000024239	EDC3	81	89.516	Chrysemys_picta_bellii
ENSSARG00000003907	EDC3	65	47.083	ENSCING00000022142	-	65	47.083	Ciona_intestinalis
ENSSARG00000003907	EDC3	80	96.371	ENSCANG00000028699	EDC3	81	96.371	Colobus_angolensis_palliatus
ENSSARG00000003907	EDC3	80	97.177	ENSCGRG00001013874	Edc3	81	97.177	Cricetulus_griseus_chok1gshd
ENSSARG00000003907	EDC3	80	97.177	ENSCGRG00000011885	Edc3	81	97.177	Cricetulus_griseus_crigri
ENSSARG00000003907	EDC3	80	77.733	ENSCSEG00000012996	edc3	79	77.733	Cynoglossus_semilaevis
ENSSARG00000003907	EDC3	80	78.226	ENSCVAG00000008023	edc3	79	78.226	Cyprinodon_variegatus
ENSSARG00000003907	EDC3	80	79.352	ENSDARG00000051931	edc3	80	79.352	Danio_rerio
ENSSARG00000003907	EDC3	78	97.436	ENSDNOG00000030661	EDC3	77	97.436	Dasypus_novemcinctus
ENSSARG00000003907	EDC3	80	96.774	ENSEASG00005005071	EDC3	81	96.774	Equus_asinus_asinus
ENSSARG00000003907	EDC3	80	96.774	ENSECAG00000017994	EDC3	81	96.774	Equus_caballus
ENSSARG00000003907	EDC3	62	77.823	ENSELUG00000007607	EDC3	67	77.823	Esox_lucius
ENSSARG00000003907	EDC3	80	77.419	ENSELUG00000005794	edc3	78	77.419	Esox_lucius
ENSSARG00000003907	EDC3	80	95.565	ENSFCAG00000002014	EDC3	81	95.565	Felis_catus
ENSSARG00000003907	EDC3	79	86.611	ENSFALG00000004543	EDC3	77	86.611	Ficedula_albicollis
ENSSARG00000003907	EDC3	80	95.161	ENSFDAG00000012582	EDC3	81	95.161	Fukomys_damarensis
ENSSARG00000003907	EDC3	80	78.629	ENSFHEG00000009375	edc3	79	78.629	Fundulus_heteroclitus
ENSSARG00000003907	EDC3	80	78.226	ENSGMOG00000002715	edc3	79	78.226	Gadus_morhua
ENSSARG00000003907	EDC3	80	89.516	ENSGALG00000040181	EDC3	80	89.516	Gallus_gallus
ENSSARG00000003907	EDC3	80	77.016	ENSGAFG00000014433	edc3	79	77.016	Gambusia_affinis
ENSSARG00000003907	EDC3	62	71.774	ENSGACG00000014671	EDC3	62	71.774	Gasterosteus_aculeatus
ENSSARG00000003907	EDC3	80	79.435	ENSGACG00000009783	edc3	79	79.435	Gasterosteus_aculeatus
ENSSARG00000003907	EDC3	80	89.516	ENSGAGG00000023477	EDC3	80	89.516	Gopherus_agassizii
ENSSARG00000003907	EDC3	80	95.565	ENSGGOG00000003552	EDC3	81	95.565	Gorilla_gorilla
ENSSARG00000003907	EDC3	80	77.823	ENSHBUG00000003635	edc3	79	77.823	Haplochromis_burtoni
ENSSARG00000003907	EDC3	73	75.304	ENSHBUG00000020817	EDC3	82	75.304	Haplochromis_burtoni
ENSSARG00000003907	EDC3	80	77.419	ENSHCOG00000016834	edc3	78	77.419	Hippocampus_comes
ENSSARG00000003907	EDC3	80	79.352	ENSIPUG00000005695	edc3	80	79.352	Ictalurus_punctatus
ENSSARG00000003907	EDC3	80	97.177	ENSSTOG00000013936	EDC3	81	97.177	Ictidomys_tridecemlineatus
ENSSARG00000003907	EDC3	80	96.371	ENSJJAG00000008074	Edc3	81	96.371	Jaculus_jaculus
ENSSARG00000003907	EDC3	80	78.226	ENSKMAG00000001243	edc3	79	78.226	Kryptolebias_marmoratus
ENSSARG00000003907	EDC3	76	70.161	ENSKMAG00000001987	EDC3	82	70.161	Kryptolebias_marmoratus
ENSSARG00000003907	EDC3	80	78.226	ENSLBEG00000013435	edc3	79	78.226	Labrus_bergylta
ENSSARG00000003907	EDC3	62	72.581	ENSLBEG00000017984	EDC3	66	72.581	Labrus_bergylta
ENSSARG00000003907	EDC3	80	87.097	ENSLACG00000014149	EDC3	81	87.097	Latimeria_chalumnae
ENSSARG00000003907	EDC3	80	72.000	ENSLOCG00000014625	edc3	79	72.000	Lepisosteus_oculatus
ENSSARG00000003907	EDC3	80	95.968	ENSLAFG00000002992	EDC3	80	95.968	Loxodonta_africana
ENSSARG00000003907	EDC3	80	96.371	ENSMFAG00000043074	EDC3	81	96.371	Macaca_fascicularis
ENSSARG00000003907	EDC3	80	96.371	ENSMMUG00000011071	EDC3	81	96.371	Macaca_mulatta
ENSSARG00000003907	EDC3	80	96.371	ENSMNEG00000035316	EDC3	81	96.371	Macaca_nemestrina
ENSSARG00000003907	EDC3	80	96.371	ENSMLEG00000030372	EDC3	81	96.371	Mandrillus_leucophaeus
ENSSARG00000003907	EDC3	80	79.032	ENSMAMG00000000505	edc3	79	79.032	Mastacembelus_armatus
ENSSARG00000003907	EDC3	72	73.171	ENSMAMG00000005423	-	77	73.171	Mastacembelus_armatus
ENSSARG00000003907	EDC3	72	75.304	ENSMZEG00005005654	EDC3	76	75.304	Maylandia_zebra
ENSSARG00000003907	EDC3	80	77.823	ENSMZEG00005004892	edc3	79	77.823	Maylandia_zebra
ENSSARG00000003907	EDC3	80	89.516	ENSMGAG00000002617	EDC3	80	89.516	Meleagris_gallopavo
ENSSARG00000003907	EDC3	80	96.774	ENSMICG00000043190	EDC3	81	96.774	Microcebus_murinus
ENSSARG00000003907	EDC3	80	96.774	ENSMOCG00000016205	Edc3	81	96.774	Microtus_ochrogaster
ENSSARG00000003907	EDC3	80	79.352	ENSMMOG00000012278	edc3	79	79.352	Mola_mola
ENSSARG00000003907	EDC3	80	91.935	ENSMODG00000009442	EDC3	81	91.935	Monodelphis_domestica
ENSSARG00000003907	EDC3	80	80.242	ENSMALG00000008658	edc3	79	80.242	Monopterus_albus
ENSSARG00000003907	EDC3	80	96.774	MGP_CAROLIEiJ_G0032280	Edc3	100	93.846	Mus_caroli
ENSSARG00000003907	EDC3	80	96.774	ENSMUSG00000038957	Edc3	100	93.846	Mus_musculus
ENSSARG00000003907	EDC3	80	96.774	MGP_PahariEiJ_G0015146	Edc3	100	93.846	Mus_pahari
ENSSARG00000003907	EDC3	80	96.774	MGP_SPRETEiJ_G0033420	Edc3	100	93.846	Mus_spretus
ENSSARG00000003907	EDC3	80	95.161	ENSMPUG00000017293	EDC3	81	95.161	Mustela_putorius_furo
ENSSARG00000003907	EDC3	80	96.400	ENSMLUG00000016382	EDC3	81	96.400	Myotis_lucifugus
ENSSARG00000003907	EDC3	80	96.371	ENSNGAG00000010923	Edc3	81	96.371	Nannospalax_galili
ENSSARG00000003907	EDC3	72	75.304	ENSNBRG00000007881	EDC3	75	75.304	Neolamprologus_brichardi
ENSSARG00000003907	EDC3	80	77.823	ENSNBRG00000002434	edc3	79	77.823	Neolamprologus_brichardi
ENSSARG00000003907	EDC3	68	96.721	ENSNLEG00000014577	EDC3	75	96.721	Nomascus_leucogenys
ENSSARG00000003907	EDC3	80	91.935	ENSMEUG00000009077	EDC3	80	91.935	Notamacropus_eugenii
ENSSARG00000003907	EDC3	60	92.593	ENSOPRG00000009540	-	59	92.593	Ochotona_princeps
ENSSARG00000003907	EDC3	80	78.226	ENSONIG00000008434	edc3	79	78.226	Oreochromis_niloticus
ENSSARG00000003907	EDC3	78	76.210	ENSONIG00000002932	-	78	76.210	Oreochromis_niloticus
ENSSARG00000003907	EDC3	58	94.161	ENSOCUG00000017740	EDC3	65	94.161	Oryctolagus_cuniculus
ENSSARG00000003907	EDC3	80	79.839	ENSORLG00000004883	edc3	79	79.839	Oryzias_latipes
ENSSARG00000003907	EDC3	62	72.177	ENSORLG00000014399	-	65	72.177	Oryzias_latipes
ENSSARG00000003907	EDC3	80	79.839	ENSORLG00020012262	edc3	79	79.839	Oryzias_latipes_hni
ENSSARG00000003907	EDC3	62	71.774	ENSORLG00020019446	-	67	71.774	Oryzias_latipes_hni
ENSSARG00000003907	EDC3	80	79.839	ENSORLG00015005634	edc3	79	79.839	Oryzias_latipes_hsok
ENSSARG00000003907	EDC3	62	71.774	ENSORLG00015017635	-	64	71.774	Oryzias_latipes_hsok
ENSSARG00000003907	EDC3	80	80.645	ENSOMEG00000014026	edc3	79	80.645	Oryzias_melastigma
ENSSARG00000003907	EDC3	62	72.177	ENSOMEG00000017354	EDC3	67	72.177	Oryzias_melastigma
ENSSARG00000003907	EDC3	80	96.774	ENSOGAG00000014441	EDC3	81	96.774	Otolemur_garnettii
ENSSARG00000003907	EDC3	80	96.371	ENSOARG00000003476	EDC3	80	96.371	Ovis_aries
ENSSARG00000003907	EDC3	80	95.565	ENSPPAG00000040143	EDC3	81	95.565	Pan_paniscus
ENSSARG00000003907	EDC3	80	95.565	ENSPPRG00000006257	EDC3	81	95.565	Panthera_pardus
ENSSARG00000003907	EDC3	80	95.565	ENSPTIG00000017424	EDC3	81	95.565	Panthera_tigris_altaica
ENSSARG00000003907	EDC3	80	95.565	ENSPTRG00000007279	EDC3	81	95.565	Pan_troglodytes
ENSSARG00000003907	EDC3	80	96.371	ENSPANG00000015997	EDC3	81	96.371	Papio_anubis
ENSSARG00000003907	EDC3	80	79.435	ENSPKIG00000019810	EDC3	79	79.435	Paramormyrops_kingsleyae
ENSSARG00000003907	EDC3	80	81.452	ENSPKIG00000004416	edc3	80	81.452	Paramormyrops_kingsleyae
ENSSARG00000003907	EDC3	71	89.899	ENSPSIG00000008474	EDC3	74	89.899	Pelodiscus_sinensis
ENSSARG00000003907	EDC3	80	75.806	ENSPMGG00000007223	edc3	79	75.806	Periophthalmus_magnuspinnatus
ENSSARG00000003907	EDC3	80	97.581	ENSPEMG00000015260	Edc3	81	97.581	Peromyscus_maniculatus_bairdii
ENSSARG00000003907	EDC3	80	91.935	ENSPCIG00000006276	EDC3	56	92.308	Phascolarctos_cinereus
ENSSARG00000003907	EDC3	80	79.032	ENSPFOG00000012204	edc3	79	79.032	Poecilia_formosa
ENSSARG00000003907	EDC3	80	79.032	ENSPLAG00000014420	edc3	79	79.032	Poecilia_latipinna
ENSSARG00000003907	EDC3	80	79.032	ENSPMEG00000023289	edc3	79	79.032	Poecilia_mexicana
ENSSARG00000003907	EDC3	80	78.629	ENSPREG00000016022	edc3	79	78.629	Poecilia_reticulata
ENSSARG00000003907	EDC3	80	93.145	ENSPPYG00000006642	EDC3	80	93.145	Pongo_abelii
ENSSARG00000003907	EDC3	69	95.968	ENSPCAG00000002802	EDC3	68	95.968	Procavia_capensis
ENSSARG00000003907	EDC3	80	96.371	ENSPCOG00000013364	EDC3	81	96.371	Propithecus_coquereli
ENSSARG00000003907	EDC3	80	96.774	ENSPVAG00000014733	EDC3	81	96.774	Pteropus_vampyrus
ENSSARG00000003907	EDC3	80	77.823	ENSPNYG00000021797	edc3	79	77.823	Pundamilia_nyererei
ENSSARG00000003907	EDC3	73	75.304	ENSPNYG00000009669	EDC3	82	75.304	Pundamilia_nyererei
ENSSARG00000003907	EDC3	80	80.242	ENSPNAG00000019657	edc3	80	80.242	Pygocentrus_nattereri
ENSSARG00000003907	EDC3	80	97.177	ENSRNOG00000019579	Edc3	80	97.177	Rattus_norvegicus
ENSSARG00000003907	EDC3	80	96.371	ENSRBIG00000019488	EDC3	81	96.371	Rhinopithecus_bieti
ENSSARG00000003907	EDC3	80	96.371	ENSRROG00000034959	EDC3	81	96.371	Rhinopithecus_roxellana
ENSSARG00000003907	EDC3	80	96.371	ENSSBOG00000004896	EDC3	81	96.371	Saimiri_boliviensis_boliviensis
ENSSARG00000003907	EDC3	77	92.140	ENSSHAG00000015075	EDC3	76	92.140	Sarcophilus_harrisii
ENSSARG00000003907	EDC3	62	82.090	ENSSFOG00015002439	edc3	82	81.048	Scleropages_formosus
ENSSARG00000003907	EDC3	80	80.242	ENSSFOG00015016939	edc3	79	80.242	Scleropages_formosus
ENSSARG00000003907	EDC3	80	80.242	ENSSMAG00000010695	edc3	79	80.242	Scophthalmus_maximus
ENSSARG00000003907	EDC3	75	75.203	ENSSMAG00000010176	-	81	75.203	Scophthalmus_maximus
ENSSARG00000003907	EDC3	74	75.806	ENSSDUG00000007671	EDC3	79	75.806	Seriola_dumerili
ENSSARG00000003907	EDC3	80	79.435	ENSSDUG00000021844	edc3	79	79.435	Seriola_dumerili
ENSSARG00000003907	EDC3	80	79.435	ENSSLDG00000022046	edc3	79	79.435	Seriola_lalandi_dorsalis
ENSSARG00000003907	EDC3	80	88.306	ENSSPUG00000008232	EDC3	81	88.306	Sphenodon_punctatus
ENSSARG00000003907	EDC3	74	72.984	ENSSPAG00000020327	EDC3	79	72.984	Stegastes_partitus
ENSSARG00000003907	EDC3	80	80.242	ENSSPAG00000010009	edc3	79	80.242	Stegastes_partitus
ENSSARG00000003907	EDC3	80	96.371	ENSSSCG00000001903	EDC3	83	96.371	Sus_scrofa
ENSSARG00000003907	EDC3	80	88.710	ENSTGUG00000004007	EDC3	80	88.710	Taeniopygia_guttata
ENSSARG00000003907	EDC3	80	79.435	ENSTRUG00000017078	edc3	79	79.435	Takifugu_rubripes
ENSSARG00000003907	EDC3	80	77.823	ENSTNIG00000016047	edc3	79	77.823	Tetraodon_nigroviridis
ENSSARG00000003907	EDC3	80	97.177	ENSTTRG00000007990	EDC3	81	97.177	Tursiops_truncatus
ENSSARG00000003907	EDC3	80	95.161	ENSUAMG00000026710	-	81	95.161	Ursus_americanus
ENSSARG00000003907	EDC3	80	95.161	ENSUMAG00000005006	EDC3	77	95.161	Ursus_maritimus
ENSSARG00000003907	EDC3	60	81.481	ENSVPAG00000003499	-	59	81.481	Vicugna_pacos
ENSSARG00000003907	EDC3	80	95.161	ENSVVUG00000018601	EDC3	81	95.161	Vulpes_vulpes
ENSSARG00000003907	EDC3	80	78.629	ENSXMAG00000007377	edc3	79	78.629	Xiphophorus_maculatus