EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000003958 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 60334 bases
Position: chrGeneScaffold_6235:40913-101246
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003625	R3H	PF01424.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003997	R3HDM2-201	2880	-	ENSSARP00000003625	960 (aa)	-	UPI0001581A70

Gene Model

Click here to download ENSSARG00000003958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000003958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000003958	R3HDM2	51	46.886	ENSSARG00000007992	ARPP21	55	53.211
ENSSARG00000003958	R3HDM2	64	50.862	ENSSARG00000000352	-	52	54.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000003958	R3HDM2	94	90.221	ENSG00000179912	R3HDM2	90	90.221	Homo_sapiens
ENSSARG00000003958	R3HDM2	97	53.908	ENSAPOG00000020341	r3hdm2	96	53.755	Acanthochromis_polyacanthus
ENSSARG00000003958	R3HDM2	94	89.908	ENSAMEG00000004812	R3HDM2	90	90.459	Ailuropoda_melanoleuca
ENSSARG00000003958	R3HDM2	88	61.199	ENSACIG00000016146	r3hdm2	92	61.456	Amphilophus_citrinellus
ENSSARG00000003958	R3HDM2	97	54.043	ENSAOCG00000023694	r3hdm2	96	54.545	Amphiprion_ocellaris
ENSSARG00000003958	R3HDM2	89	62.545	ENSAPEG00000008851	r3hdm2	94	62.909	Amphiprion_percula
ENSSARG00000003958	R3HDM2	89	59.402	ENSATEG00000025024	r3hdm2	94	61.416	Anabas_testudineus
ENSSARG00000003958	R3HDM2	94	79.228	ENSAPLG00000004298	R3HDM2	86	79.228	Anas_platyrhynchos
ENSSARG00000003958	R3HDM2	100	65.787	ENSACAG00000006388	R3HDM2	93	75.923	Anolis_carolinensis
ENSSARG00000003958	R3HDM2	94	89.852	ENSANAG00000025397	-	93	89.852	Aotus_nancymaae
ENSSARG00000003958	R3HDM2	93	86.900	ENSANAG00000031310	-	94	86.900	Aotus_nancymaae
ENSSARG00000003958	R3HDM2	79	71.111	ENSACLG00000019106	r3hdm2	90	60.580	Astatotilapia_calliptera
ENSSARG00000003958	R3HDM2	88	62.662	ENSAMXG00000017180	r3hdm2	93	61.688	Astyanax_mexicanus
ENSSARG00000003958	R3HDM2	94	90.406	ENSBTAG00000018361	R3HDM2	93	90.406	Bos_taurus
ENSSARG00000003958	R3HDM2	94	90.037	ENSCJAG00000007365	R3HDM2	93	90.037	Callithrix_jacchus
ENSSARG00000003958	R3HDM2	94	90.406	ENSCAFG00000000215	R3HDM2	93	89.908	Canis_familiaris
ENSSARG00000003958	R3HDM2	94	90.406	ENSCAFG00020023713	R3HDM2	93	90.406	Canis_lupus_dingo
ENSSARG00000003958	R3HDM2	94	89.668	ENSCHIG00000014022	R3HDM2	93	89.668	Capra_hircus
ENSSARG00000003958	R3HDM2	94	89.114	ENSTSYG00000001449	R3HDM2	93	89.114	Carlito_syrichta
ENSSARG00000003958	R3HDM2	94	87.823	ENSCPOG00000009217	R3HDM2	93	87.823	Cavia_porcellus
ENSSARG00000003958	R3HDM2	82	89.744	ENSCCAG00000026083	R3HDM2	92	89.744	Cebus_capucinus
ENSSARG00000003958	R3HDM2	94	89.852	ENSCATG00000036929	R3HDM2	90	89.852	Cercocebus_atys
ENSSARG00000003958	R3HDM2	94	88.376	ENSCLAG00000011997	R3HDM2	93	88.376	Chinchilla_lanigera
ENSSARG00000003958	R3HDM2	94	90.037	ENSCSAG00000004911	R3HDM2	89	90.037	Chlorocebus_sabaeus
ENSSARG00000003958	R3HDM2	68	86.644	ENSCHOG00000005636	R3HDM2	79	86.644	Choloepus_hoffmanni
ENSSARG00000003958	R3HDM2	94	74.431	ENSCPBG00000013922	R3HDM2	94	74.431	Chrysemys_picta_bellii
ENSSARG00000003958	R3HDM2	94	89.852	ENSCANG00000043807	R3HDM2	93	89.852	Colobus_angolensis_palliatus
ENSSARG00000003958	R3HDM2	94	88.192	ENSCGRG00001017324	R3hdm2	93	88.192	Cricetulus_griseus_chok1gshd
ENSSARG00000003958	R3HDM2	94	88.192	ENSCGRG00000003862	R3hdm2	92	88.192	Cricetulus_griseus_crigri
ENSSARG00000003958	R3HDM2	90	59.520	ENSCSEG00000010925	r3hdm2	89	62.039	Cynoglossus_semilaevis
ENSSARG00000003958	R3HDM2	91	59.272	ENSCVAG00000009058	r3hdm2	93	61.062	Cyprinodon_variegatus
ENSSARG00000003958	R3HDM2	87	58.576	ENSDARG00000102610	r3hdm2	92	57.092	Danio_rerio
ENSSARG00000003958	R3HDM2	94	89.299	ENSDNOG00000015033	R3HDM2	89	89.299	Dasypus_novemcinctus
ENSSARG00000003958	R3HDM2	89	88.561	ENSDORG00000011462	R3hdm2	93	88.561	Dipodomys_ordii
ENSSARG00000003958	R3HDM2	93	90.406	ENSEASG00005007091	R3HDM2	93	90.406	Equus_asinus_asinus
ENSSARG00000003958	R3HDM2	94	90.406	ENSECAG00000003157	R3HDM2	93	90.406	Equus_caballus
ENSSARG00000003958	R3HDM2	68	85.321	ENSELUG00000015969	r3hdm2	90	59.483	Esox_lucius
ENSSARG00000003958	R3HDM2	94	91.144	ENSFCAG00000000192	R3HDM2	93	91.144	Felis_catus
ENSSARG00000003958	R3HDM2	82	85.714	ENSFALG00000000255	R3HDM2	89	85.714	Ficedula_albicollis
ENSSARG00000003958	R3HDM2	94	88.930	ENSFDAG00000019385	R3HDM2	92	88.930	Fukomys_damarensis
ENSSARG00000003958	R3HDM2	80	70.175	ENSFHEG00000016484	r3hdm2	90	60.381	Fundulus_heteroclitus
ENSSARG00000003958	R3HDM2	81	63.090	ENSGMOG00000007961	r3hdm2	81	62.876	Gadus_morhua
ENSSARG00000003958	R3HDM2	94	74.081	ENSGALG00000043736	R3HDM2	90	73.905	Gallus_gallus
ENSSARG00000003958	R3HDM2	91	59.549	ENSGAFG00000013887	r3hdm2	94	60.590	Gambusia_affinis
ENSSARG00000003958	R3HDM2	89	60.885	ENSGACG00000006442	r3hdm2	90	62.301	Gasterosteus_aculeatus
ENSSARG00000003958	R3HDM2	94	74.301	ENSGAGG00000017797	R3HDM2	93	74.126	Gopherus_agassizii
ENSSARG00000003958	R3HDM2	94	89.852	ENSGGOG00000015007	R3HDM2	90	89.852	Gorilla_gorilla
ENSSARG00000003958	R3HDM2	94	88.376	ENSHGLG00000010434	-	93	88.376	Heterocephalus_glaber_female
ENSSARG00000003958	R3HDM2	83	79.330	ENSHGLG00000010421	-	90	79.330	Heterocephalus_glaber_female
ENSSARG00000003958	R3HDM2	94	88.192	ENSHGLG00100004183	-	93	88.192	Heterocephalus_glaber_male
ENSSARG00000003958	R3HDM2	91	74.038	ENSHGLG00100018871	-	93	74.038	Heterocephalus_glaber_male
ENSSARG00000003958	R3HDM2	90	57.812	ENSHCOG00000001142	r3hdm2	88	60.354	Hippocampus_comes
ENSSARG00000003958	R3HDM2	94	57.672	ENSIPUG00000023873	r3hdm2	85	60.494	Ictalurus_punctatus
ENSSARG00000003958	R3HDM2	94	89.299	ENSSTOG00000013424	R3HDM2	92	89.299	Ictidomys_tridecemlineatus
ENSSARG00000003958	R3HDM2	94	88.930	ENSJJAG00000010001	R3hdm2	90	88.930	Jaculus_jaculus
ENSSARG00000003958	R3HDM2	80	71.491	ENSKMAG00000012695	r3hdm2	93	60.177	Kryptolebias_marmoratus
ENSSARG00000003958	R3HDM2	80	70.044	ENSLBEG00000013115	r3hdm2	88	61.446	Labrus_bergylta
ENSSARG00000003958	R3HDM2	89	66.300	ENSLACG00000019064	r3hdm2	91	66.239	Latimeria_chalumnae
ENSSARG00000003958	R3HDM2	94	63.766	ENSLOCG00000005976	r3hdm2	93	65.548	Lepisosteus_oculatus
ENSSARG00000003958	R3HDM2	94	88.192	ENSLAFG00000006510	R3HDM2	90	88.192	Loxodonta_africana
ENSSARG00000003958	R3HDM2	94	90.037	ENSMFAG00000036385	R3HDM2	93	90.037	Macaca_fascicularis
ENSSARG00000003958	R3HDM2	94	90.037	ENSMMUG00000021789	R3HDM2	93	90.037	Macaca_mulatta
ENSSARG00000003958	R3HDM2	94	90.037	ENSMNEG00000025314	R3HDM2	93	90.037	Macaca_nemestrina
ENSSARG00000003958	R3HDM2	94	90.037	ENSMLEG00000028915	R3HDM2	90	90.037	Mandrillus_leucophaeus
ENSSARG00000003958	R3HDM2	80	71.491	ENSMAMG00000009793	r3hdm2	90	59.794	Mastacembelus_armatus
ENSSARG00000003958	R3HDM2	91	58.462	ENSMZEG00005007319	r3hdm2	90	60.580	Maylandia_zebra
ENSSARG00000003958	R3HDM2	94	89.299	ENSMICG00000012389	R3HDM2	92	89.299	Microcebus_murinus
ENSSARG00000003958	R3HDM2	94	88.192	ENSMOCG00000014425	R3hdm2	93	88.192	Microtus_ochrogaster
ENSSARG00000003958	R3HDM2	90	62.050	ENSMMOG00000007448	r3hdm2	94	61.871	Mola_mola
ENSSARG00000003958	R3HDM2	89	60.323	ENSMALG00000010211	r3hdm2	97	62.138	Monopterus_albus
ENSSARG00000003958	R3HDM2	94	88.007	MGP_CAROLIEiJ_G0015896	R3hdm2	93	88.007	Mus_caroli
ENSSARG00000003958	R3HDM2	94	88.007	ENSMUSG00000025404	R3hdm2	93	88.007	Mus_musculus
ENSSARG00000003958	R3HDM2	94	88.376	MGP_PahariEiJ_G0031189	R3hdm2	93	88.376	Mus_pahari
ENSSARG00000003958	R3HDM2	94	88.007	MGP_SPRETEiJ_G0016722	R3hdm2	92	88.007	Mus_spretus
ENSSARG00000003958	R3HDM2	91	89.768	ENSMPUG00000001818	R3HDM2	87	89.768	Mustela_putorius_furo
ENSSARG00000003958	R3HDM2	94	89.483	ENSMLUG00000004980	R3HDM2	90	89.483	Myotis_lucifugus
ENSSARG00000003958	R3HDM2	94	88.930	ENSNGAG00000018800	R3hdm2	93	88.930	Nannospalax_galili
ENSSARG00000003958	R3HDM2	89	60.531	ENSNBRG00000004483	r3hdm2	94	63.009	Neolamprologus_brichardi
ENSSARG00000003958	R3HDM2	94	90.221	ENSNLEG00000017351	R3HDM2	93	90.221	Nomascus_leucogenys
ENSSARG00000003958	R3HDM2	94	80.550	ENSMEUG00000008588	R3HDM2	90	80.183	Notamacropus_eugenii
ENSSARG00000003958	R3HDM2	93	80.812	ENSOPRG00000013670	R3HDM2	92	80.812	Ochotona_princeps
ENSSARG00000003958	R3HDM2	90	60.708	ENSONIG00000005075	r3hdm2	90	62.832	Oreochromis_niloticus
ENSSARG00000003958	R3HDM2	94	89.483	ENSOCUG00000013258	R3HDM2	89	89.483	Oryctolagus_cuniculus
ENSSARG00000003958	R3HDM2	94	58.854	ENSORLG00000005502	r3hdm2	90	58.802	Oryzias_latipes
ENSSARG00000003958	R3HDM2	94	58.681	ENSORLG00020017069	r3hdm2	90	60.816	Oryzias_latipes_hni
ENSSARG00000003958	R3HDM2	94	58.854	ENSORLG00015012735	r3hdm2	90	60.177	Oryzias_latipes_hsok
ENSSARG00000003958	R3HDM2	94	57.093	ENSOMEG00000018079	r3hdm2	88	58.319	Oryzias_melastigma
ENSSARG00000003958	R3HDM2	94	89.483	ENSOGAG00000012055	R3HDM2	89	89.483	Otolemur_garnettii
ENSSARG00000003958	R3HDM2	90	74.059	ENSOGAG00000027966	-	93	73.904	Otolemur_garnettii
ENSSARG00000003958	R3HDM2	94	89.358	ENSOARG00000006929	R3HDM2	93	89.358	Ovis_aries
ENSSARG00000003958	R3HDM2	94	90.221	ENSPPAG00000034395	R3HDM2	90	90.221	Pan_paniscus
ENSSARG00000003958	R3HDM2	94	91.144	ENSPPRG00000009240	R3HDM2	93	91.144	Panthera_pardus
ENSSARG00000003958	R3HDM2	94	91.144	ENSPTIG00000008752	R3HDM2	93	91.144	Panthera_tigris_altaica
ENSSARG00000003958	R3HDM2	94	90.221	ENSPTRG00000046457	R3HDM2	93	90.221	Pan_troglodytes
ENSSARG00000003958	R3HDM2	93	89.852	ENSPANG00000024002	R3HDM2	91	89.852	Papio_anubis
ENSSARG00000003958	R3HDM2	94	61.676	ENSPKIG00000003171	r3hdm2	90	62.701	Paramormyrops_kingsleyae
ENSSARG00000003958	R3HDM2	88	62.000	ENSPMGG00000007061	r3hdm2	93	62.138	Periophthalmus_magnuspinnatus
ENSSARG00000003958	R3HDM2	94	88.007	ENSPEMG00000015964	R3hdm2	93	88.007	Peromyscus_maniculatus_bairdii
ENSSARG00000003958	R3HDM2	94	82.752	ENSPCIG00000023841	R3HDM2	93	82.018	Phascolarctos_cinereus
ENSSARG00000003958	R3HDM2	89	56.923	ENSPFOG00000006077	r3hdm2	88	59.520	Poecilia_formosa
ENSSARG00000003958	R3HDM2	80	69.737	ENSPLAG00000002971	r3hdm2	94	60.276	Poecilia_latipinna
ENSSARG00000003958	R3HDM2	80	69.737	ENSPMEG00000005330	r3hdm2	94	60.276	Poecilia_mexicana
ENSSARG00000003958	R3HDM2	80	69.737	ENSPREG00000008424	r3hdm2	94	58.621	Poecilia_reticulata
ENSSARG00000003958	R3HDM2	91	84.069	ENSPPYG00000004685	R3HDM2	75	84.069	Pongo_abelii
ENSSARG00000003958	R3HDM2	81	85.240	ENSPCAG00000014642	R3HDM2	83	85.240	Procavia_capensis
ENSSARG00000003958	R3HDM2	94	89.114	ENSPCOG00000013201	R3HDM2	93	89.114	Propithecus_coquereli
ENSSARG00000003958	R3HDM2	94	90.221	ENSPVAG00000003967	R3HDM2	90	90.221	Pteropus_vampyrus
ENSSARG00000003958	R3HDM2	89	56.495	ENSPNYG00000013479	r3hdm2	94	57.793	Pundamilia_nyererei
ENSSARG00000003958	R3HDM2	94	58.156	ENSPNAG00000017473	r3hdm2	88	60.816	Pygocentrus_nattereri
ENSSARG00000003958	R3HDM2	94	86.924	ENSRNOG00000007801	R3hdm2	93	86.924	Rattus_norvegicus
ENSSARG00000003958	R3HDM2	94	85.424	ENSRBIG00000037403	R3HDM2	93	85.055	Rhinopithecus_bieti
ENSSARG00000003958	R3HDM2	94	89.852	ENSRROG00000022271	R3HDM2	93	89.852	Rhinopithecus_roxellana
ENSSARG00000003958	R3HDM2	94	90.037	ENSSBOG00000023547	R3HDM2	93	90.037	Saimiri_boliviensis_boliviensis
ENSSARG00000003958	R3HDM2	94	77.555	ENSSHAG00000003511	R3HDM2	92	83.333	Sarcophilus_harrisii
ENSSARG00000003958	R3HDM2	88	63.620	ENSSFOG00015011219	r3hdm2	93	63.375	Scleropages_formosus
ENSSARG00000003958	R3HDM2	80	71.053	ENSSMAG00000012073	r3hdm2	94	61.092	Scophthalmus_maximus
ENSSARG00000003958	R3HDM2	91	58.532	ENSSDUG00000019269	r3hdm2	93	62.124	Seriola_dumerili
ENSSARG00000003958	R3HDM2	97	54.339	ENSSLDG00000005252	r3hdm2	100	56.702	Seriola_lalandi_dorsalis
ENSSARG00000003958	R3HDM2	94	70.069	ENSSPUG00000014132	R3HDM2	94	70.934	Sphenodon_punctatus
ENSSARG00000003958	R3HDM2	95	57.096	ENSSPAG00000022594	r3hdm2	100	57.730	Stegastes_partitus
ENSSARG00000003958	R3HDM2	94	90.406	ENSSSCG00000026498	R3HDM2	93	90.406	Sus_scrofa
ENSSARG00000003958	R3HDM2	65	72.348	ENSTGUG00000015881	R3HDM2	87	75.379	Taeniopygia_guttata
ENSSARG00000003958	R3HDM2	79	73.394	ENSTRUG00000015075	r3hdm2	94	60.946	Takifugu_rubripes
ENSSARG00000003958	R3HDM2	90	56.061	ENSTNIG00000007057	r3hdm2	88	58.333	Tetraodon_nigroviridis
ENSSARG00000003958	R3HDM2	75	91.756	ENSTBEG00000015967	R3HDM2	75	91.756	Tupaia_belangeri
ENSSARG00000003958	R3HDM2	90	71.937	ENSTTRG00000013082	R3HDM2	87	71.937	Tursiops_truncatus
ENSSARG00000003958	R3HDM2	94	90.590	ENSUAMG00000020913	R3HDM2	90	91.144	Ursus_americanus
ENSSARG00000003958	R3HDM2	94	90.590	ENSUMAG00000019179	R3HDM2	93	91.144	Ursus_maritimus
ENSSARG00000003958	R3HDM2	86	89.852	ENSVPAG00000008656	R3HDM2	83	89.852	Vicugna_pacos
ENSSARG00000003958	R3HDM2	92	89.675	ENSVVUG00000018014	R3HDM2	87	89.675	Vulpes_vulpes
ENSSARG00000003958	R3HDM2	94	68.007	ENSXETG00000017153	r3hdm2	93	66.788	Xenopus_tropicalis
ENSSARG00000003958	R3HDM2	78	61.033	ENSXCOG00000013882	r3hdm2	90	61.033	Xiphophorus_couchianus
ENSSARG00000003958	R3HDM2	80	69.737	ENSXMAG00000017978	r3hdm2	90	61.033	Xiphophorus_maculatus