EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000004013 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 14659 bases
Position: chrscaffold_235681:3751-18409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003611	MMR_HSR1	PF01926.23	2.5e-26	1	3
ENSSARP00000003611	MMR_HSR1	PF01926.23	2.5e-26	2	3
ENSSARP00000003611	MMR_HSR1	PF01926.23	2.5e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000003982	-	1938	-	ENSSARP00000003611	646 (aa)	-	UPI0001580C06

Gene Model

Click here to download ENSSARG00000004013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000004013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000004013	-	86	46.193	ENSSARG00000006445	GIMAP2	76	46.193
ENSSARG00000004013	-	87	39.037	ENSSARG00000006448	-	70	39.037
ENSSARG00000004013	-	85	37.838	ENSSARG00000011439	-	69	37.838
ENSSARG00000004013	-	87	40.984	ENSSARG00000011388	-	77	41.530
ENSSARG00000004013	-	93	37.811	ENSSARG00000004782	-	80	37.811
ENSSARG00000004013	-	86	40.314	ENSSARG00000008956	-	61	40.314
ENSSARG00000004013	-	91	41.667	ENSSARG00000000290	-	79	41.667
ENSSARG00000004013	-	86	40.212	ENSSARG00000009270	-	65	40.212
ENSSARG00000004013	-	85	42.623	ENSSARG00000004634	-	64	42.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000004013	-	98	50.000	ENSG00000171115	GIMAP8	97	50.000	Homo_sapiens
ENSSARG00000004013	-	99	49.309	ENSAMEG00000002432	GIMAP8	97	49.309	Ailuropoda_melanoleuca
ENSSARG00000004013	-	100	49.924	ENSANAG00000038300	GIMAP8	95	49.924	Aotus_nancymaae
ENSSARG00000004013	-	95	48.718	ENSBTAG00000014402	GIMAP8	93	48.718	Bos_taurus
ENSSARG00000004013	-	96	50.238	ENSCJAG00000010511	GIMAP8	95	50.238	Callithrix_jacchus
ENSSARG00000004013	-	98	50.234	ENSCAFG00000004572	GIMAP8	97	50.693	Canis_familiaris
ENSSARG00000004013	-	98	50.894	ENSCAFG00020006503	GIMAP8	98	50.536	Canis_lupus_dingo
ENSSARG00000004013	-	94	38.693	ENSCHIG00000016726	-	96	38.693	Capra_hircus
ENSSARG00000004013	-	94	47.917	ENSCHIG00000013015	-	94	47.917	Capra_hircus
ENSSARG00000004013	-	99	47.149	ENSCHIG00000021733	-	98	47.149	Capra_hircus
ENSSARG00000004013	-	98	49.922	ENSTSYG00000014287	GIMAP8	97	49.922	Carlito_syrichta
ENSSARG00000004013	-	99	49.147	ENSCCAG00000022092	GIMAP8	97	49.147	Cebus_capucinus
ENSSARG00000004013	-	98	51.719	ENSCATG00000013026	GIMAP8	98	51.618	Cercocebus_atys
ENSSARG00000004013	-	98	51.719	ENSCSAG00000006880	GIMAP8	98	51.618	Chlorocebus_sabaeus
ENSSARG00000004013	-	98	51.406	ENSCANG00000039247	GIMAP8	98	51.156	Colobus_angolensis_palliatus
ENSSARG00000004013	-	97	44.013	ENSCGRG00001018061	Gimap8	92	44.551	Cricetulus_griseus_chok1gshd
ENSSARG00000004013	-	97	44.013	ENSCGRG00000014281	Gimap8	92	44.551	Cricetulus_griseus_crigri
ENSSARG00000004013	-	99	50.386	ENSEASG00005020627	GIMAP8	95	50.386	Equus_asinus_asinus
ENSSARG00000004013	-	99	50.232	ENSECAG00000018802	GIMAP8	95	51.789	Equus_caballus
ENSSARG00000004013	-	96	45.806	ENSEEUG00000000919	-	93	46.326	Erinaceus_europaeus
ENSSARG00000004013	-	99	51.623	ENSFCAG00000011441	GIMAP8	99	51.623	Felis_catus
ENSSARG00000004013	-	95	54.067	ENSFDAG00000007805	-	91	54.067	Fukomys_damarensis
ENSSARG00000004013	-	98	49.688	ENSGGOG00000025687	GIMAP8	97	49.688	Gorilla_gorilla
ENSSARG00000004013	-	94	48.282	ENSSTOG00000025007	GIMAP8	92	48.282	Ictidomys_tridecemlineatus
ENSSARG00000004013	-	98	51.875	ENSMFAG00000002026	GIMAP8	98	51.772	Macaca_fascicularis
ENSSARG00000004013	-	98	51.875	ENSMMUG00000022636	GIMAP8	98	51.772	Macaca_mulatta
ENSSARG00000004013	-	98	51.875	ENSMNEG00000042139	GIMAP8	97	51.875	Macaca_nemestrina
ENSSARG00000004013	-	98	42.623	ENSMLEG00000036169	GIMAP8	97	42.922	Mandrillus_leucophaeus
ENSSARG00000004013	-	94	35.859	ENSMGAG00000001590	-	99	35.859	Meleagris_gallopavo
ENSSARG00000004013	-	98	49.688	ENSMICG00000015448	GIMAP8	92	49.688	Microcebus_murinus
ENSSARG00000004013	-	99	46.179	ENSMOCG00000005505	Gimap8	91	46.699	Microtus_ochrogaster
ENSSARG00000004013	-	95	45.120	MGP_CAROLIEiJ_G0028347	Gimap8	91	45.120	Mus_caroli
ENSSARG00000004013	-	95	45.600	ENSMUSG00000064262	Gimap8	91	45.600	Mus_musculus
ENSSARG00000004013	-	95	45.455	MGP_PahariEiJ_G0022101	Gimap8	95	45.455	Mus_pahari
ENSSARG00000004013	-	95	45.440	MGP_SPRETEiJ_G0029350	Gimap8	91	45.440	Mus_spretus
ENSSARG00000004013	-	99	50.567	ENSMLUG00000012405	GIMAP8	99	50.567	Myotis_lucifugus
ENSSARG00000004013	-	99	50.077	ENSNLEG00000003821	GIMAP8	98	50.077	Nomascus_leucogenys
ENSSARG00000004013	-	98	40.649	ENSMEUG00000010750	-	99	40.649	Notamacropus_eugenii
ENSSARG00000004013	-	92	39.796	ENSONIG00000005027	GIMAP8	100	39.796	Oreochromis_niloticus
ENSSARG00000004013	-	97	49.683	ENSOCUG00000001150	GIMAP8	97	50.157	Oryctolagus_cuniculus
ENSSARG00000004013	-	98	48.504	ENSOGAG00000030330	GIMAP8	97	48.504	Otolemur_garnettii
ENSSARG00000004013	-	90	52.427	ENSOARG00000001131	-	88	52.427	Ovis_aries
ENSSARG00000004013	-	95	41.176	ENSOARG00000001393	-	99	41.176	Ovis_aries
ENSSARG00000004013	-	98	50.000	ENSPPAG00000038601	GIMAP8	97	50.000	Pan_paniscus
ENSSARG00000004013	-	99	50.617	ENSPPRG00000020196	GIMAP8	99	50.617	Panthera_pardus
ENSSARG00000004013	-	99	50.772	ENSPTIG00000009369	GIMAP8	99	50.772	Panthera_tigris_altaica
ENSSARG00000004013	-	98	50.000	ENSPTRG00000046210	-	97	50.000	Pan_troglodytes
ENSSARG00000004013	-	98	50.156	ENSPTRG00000019856	GIMAP8	97	50.156	Pan_troglodytes
ENSSARG00000004013	-	98	51.719	ENSPANG00000008718	GIMAP8	98	51.618	Papio_anubis
ENSSARG00000004013	-	97	43.396	ENSPEMG00000016086	Gimap8	92	43.396	Peromyscus_maniculatus_bairdii
ENSSARG00000004013	-	99	46.870	ENSPPYG00000018169	GIMAP8	99	46.870	Pongo_abelii
ENSSARG00000004013	-	97	50.549	ENSPCOG00000015779	GIMAP8	92	50.549	Propithecus_coquereli
ENSSARG00000004013	-	94	49.353	ENSPVAG00000010750	GIMAP8	96	49.920	Pteropus_vampyrus
ENSSARG00000004013	-	95	44.855	ENSRNOG00000020169	Gimap8	87	44.855	Rattus_norvegicus
ENSSARG00000004013	-	98	51.250	ENSRBIG00000017674	GIMAP8	99	52.066	Rhinopithecus_bieti
ENSSARG00000004013	-	98	51.406	ENSRROG00000040860	GIMAP8	98	51.156	Rhinopithecus_roxellana
ENSSARG00000004013	-	99	49.767	ENSSBOG00000028699	GIMAP8	97	49.767	Saimiri_boliviensis_boliviensis
ENSSARG00000004013	-	97	41.228	ENSSHAG00000005895	-	99	41.228	Sarcophilus_harrisii
ENSSARG00000004013	-	98	34.242	ENSSHAG00000008260	-	99	34.242	Sarcophilus_harrisii
ENSSARG00000004013	-	98	49.289	ENSSSCG00000016452	GIMAP8	94	49.765	Sus_scrofa
ENSSARG00000004013	-	95	44.952	ENSTBEG00000009953	-	89	44.952	Tupaia_belangeri
ENSSARG00000004013	-	98	50.079	ENSTTRG00000002323	GIMAP8	98	50.389	Tursiops_truncatus
ENSSARG00000004013	-	97	50.079	ENSUAMG00000023316	GIMAP8	95	50.079	Ursus_americanus
ENSSARG00000004013	-	97	50.236	ENSUMAG00000011031	GIMAP8	96	50.236	Ursus_maritimus
ENSSARG00000004013	-	95	49.213	ENSVPAG00000007363	-	98	49.213	Vicugna_pacos
ENSSARG00000004013	-	99	50.241	ENSVVUG00000009161	GIMAP8	98	50.241	Vulpes_vulpes