EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000004108 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 102000 bases
Position: chrGeneScaffold_646:40333-142332
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000003751	DUF1604	PF07713.13	1.2e-36	1	1
ENSSARP00000003751	G-patch	PF01585.23	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000004133	GPATCH1-201	2784	-	ENSSARP00000003751	927 (aa)	-	UPI0001581BF2

Gene Model

Click here to download ENSSARG00000004108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000004108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000004108	GPATCH1	72	85.672	ENSG00000076650	GPATCH1	83	89.623	Homo_sapiens
ENSSARG00000004108	GPATCH1	72	85.757	ENSAMEG00000015575	GPATCH1	72	85.757	Ailuropoda_melanoleuca
ENSSARG00000004108	GPATCH1	71	68.508	ENSAOCG00000006668	gpatch1	67	68.508	Amphiprion_ocellaris
ENSSARG00000004108	GPATCH1	72	56.618	ENSAPEG00000000026	gpatch1	71	57.037	Amphiprion_percula
ENSSARG00000004108	GPATCH1	70	56.866	ENSATEG00000014494	gpatch1	69	57.057	Anabas_testudineus
ENSSARG00000004108	GPATCH1	70	69.985	ENSAPLG00000007584	GPATCH1	72	69.985	Anas_platyrhynchos
ENSSARG00000004108	GPATCH1	72	85.185	ENSANAG00000027002	GPATCH1	72	85.185	Aotus_nancymaae
ENSSARG00000004108	GPATCH1	72	56.350	ENSACLG00000024740	gpatch1	70	56.350	Astatotilapia_calliptera
ENSSARG00000004108	GPATCH1	70	57.803	ENSAMXG00000020177	gpatch1	75	57.183	Astyanax_mexicanus
ENSSARG00000004108	GPATCH1	72	85.015	ENSBTAG00000000721	GPATCH1	72	85.015	Bos_taurus
ENSSARG00000004108	GPATCH1	68	30.441	WBGene00011109	R07E5.1	68	30.781	Caenorhabditis_elegans
ENSSARG00000004108	GPATCH1	72	85.185	ENSCJAG00000000684	GPATCH1	72	85.185	Callithrix_jacchus
ENSSARG00000004108	GPATCH1	72	85.778	ENSCAFG00000007457	GPATCH1	61	85.778	Canis_familiaris
ENSSARG00000004108	GPATCH1	72	85.778	ENSCAFG00020019731	GPATCH1	73	85.778	Canis_lupus_dingo
ENSSARG00000004108	GPATCH1	72	85.608	ENSCHIG00000019626	GPATCH1	75	85.608	Capra_hircus
ENSSARG00000004108	GPATCH1	69	82.689	ENSCAPG00000008827	GPATCH1	72	82.689	Cavia_aperea
ENSSARG00000004108	GPATCH1	72	84.250	ENSCPOG00000024477	GPATCH1	72	84.250	Cavia_porcellus
ENSSARG00000004108	GPATCH1	72	84.741	ENSCCAG00000024676	GPATCH1	72	85.037	Cebus_capucinus
ENSSARG00000004108	GPATCH1	72	85.355	ENSCATG00000043637	GPATCH1	83	88.679	Cercocebus_atys
ENSSARG00000004108	GPATCH1	69	84.783	ENSCLAG00000003395	-	73	84.783	Chinchilla_lanigera
ENSSARG00000004108	GPATCH1	72	82.396	ENSCSAG00000004743	GPATCH1	72	82.396	Chlorocebus_sabaeus
ENSSARG00000004108	GPATCH1	65	75.331	ENSCHOG00000012865	GPATCH1	70	75.497	Choloepus_hoffmanni
ENSSARG00000004108	GPATCH1	69	71.451	ENSCPBG00000000666	GPATCH1	86	71.451	Chrysemys_picta_bellii
ENSSARG00000004108	GPATCH1	68	36.687	ENSCING00000012518	-	74	36.687	Ciona_intestinalis
ENSSARG00000004108	GPATCH1	63	89.796	ENSCANG00000012540	GPATCH1	67	89.796	Colobus_angolensis_palliatus
ENSSARG00000004108	GPATCH1	67	83.146	ENSCGRG00001016736	Gpatch1	71	82.298	Cricetulus_griseus_chok1gshd
ENSSARG00000004108	GPATCH1	69	68.224	ENSCGRG00000005069	Gpatch1	68	68.224	Cricetulus_griseus_crigri
ENSSARG00000004108	GPATCH1	63	64.286	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSSARG00000004108	GPATCH1	70	58.667	ENSDARG00000033418	gpatch1	69	58.519	Danio_rerio
ENSSARG00000004108	GPATCH1	72	84.179	ENSDNOG00000005291	GPATCH1	76	84.179	Dasypus_novemcinctus
ENSSARG00000004108	GPATCH1	72	79.111	ENSDORG00000012546	Gpatch1	75	79.111	Dipodomys_ordii
ENSSARG00000004108	GPATCH1	69	33.716	FBgn0036386	CG8833	67	34.003	Drosophila_melanogaster
ENSSARG00000004108	GPATCH1	72	79.259	ENSETEG00000003626	GPATCH1	73	79.259	Echinops_telfairi
ENSSARG00000004108	GPATCH1	70	40.835	ENSEBUG00000011286	gpatch1	71	41.729	Eptatretus_burgeri
ENSSARG00000004108	GPATCH1	72	85.420	ENSEASG00005021162	GPATCH1	79	85.420	Equus_asinus_asinus
ENSSARG00000004108	GPATCH1	72	86.053	ENSECAG00000022743	GPATCH1	70	85.567	Equus_caballus
ENSSARG00000004108	GPATCH1	63	77.451	ENSEEUG00000012925	GPATCH1	64	77.451	Erinaceus_europaeus
ENSSARG00000004108	GPATCH1	71	56.069	ENSELUG00000018195	gpatch1	72	57.081	Esox_lucius
ENSSARG00000004108	GPATCH1	72	84.570	ENSFCAG00000014917	GPATCH1	72	84.718	Felis_catus
ENSSARG00000004108	GPATCH1	71	69.474	ENSFALG00000007821	GPATCH1	71	69.311	Ficedula_albicollis
ENSSARG00000004108	GPATCH1	70	81.538	ENSFDAG00000003871	GPATCH1	73	81.538	Fukomys_damarensis
ENSSARG00000004108	GPATCH1	71	50.116	ENSGMOG00000003830	gpatch1	78	48.512	Gadus_morhua
ENSSARG00000004108	GPATCH1	71	70.197	ENSGALG00000004839	GPATCH1	73	70.197	Gallus_gallus
ENSSARG00000004108	GPATCH1	70	54.173	ENSGACG00000017544	gpatch1	73	54.173	Gasterosteus_aculeatus
ENSSARG00000004108	GPATCH1	72	70.282	ENSGAGG00000010067	GPATCH1	72	70.282	Gopherus_agassizii
ENSSARG00000004108	GPATCH1	71	84.802	ENSGGOG00000010862	GPATCH1	72	85.538	Gorilla_gorilla
ENSSARG00000004108	GPATCH1	72	56.496	ENSHBUG00000023462	gpatch1	71	56.496	Haplochromis_burtoni
ENSSARG00000004108	GPATCH1	72	81.630	ENSHGLG00000009334	GPATCH1	72	81.630	Heterocephalus_glaber_female
ENSSARG00000004108	GPATCH1	72	81.778	ENSHGLG00100018074	GPATCH1	72	81.778	Heterocephalus_glaber_male
ENSSARG00000004108	GPATCH1	70	59.581	ENSIPUG00000014977	gpatch1	69	59.581	Ictalurus_punctatus
ENSSARG00000004108	GPATCH1	72	82.764	ENSSTOG00000003720	GPATCH1	72	82.764	Ictidomys_tridecemlineatus
ENSSARG00000004108	GPATCH1	72	83.383	ENSJJAG00000023765	Gpatch1	73	83.383	Jaculus_jaculus
ENSSARG00000004108	GPATCH1	72	56.130	ENSKMAG00000017950	gpatch1	72	56.241	Kryptolebias_marmoratus
ENSSARG00000004108	GPATCH1	72	54.031	ENSLBEG00000026527	gpatch1	70	54.880	Labrus_bergylta
ENSSARG00000004108	GPATCH1	67	65.064	ENSLACG00000008130	GPATCH1	68	65.120	Latimeria_chalumnae
ENSSARG00000004108	GPATCH1	72	61.652	ENSLOCG00000001800	gpatch1	71	61.652	Lepisosteus_oculatus
ENSSARG00000004108	GPATCH1	72	84.718	ENSLAFG00000013589	GPATCH1	77	84.718	Loxodonta_africana
ENSSARG00000004108	GPATCH1	72	85.481	ENSMFAG00000034418	GPATCH1	83	88.679	Macaca_fascicularis
ENSSARG00000004108	GPATCH1	72	85.503	ENSMMUG00000011790	GPATCH1	83	89.623	Macaca_mulatta
ENSSARG00000004108	GPATCH1	72	85.185	ENSMNEG00000045084	GPATCH1	83	84.906	Macaca_nemestrina
ENSSARG00000004108	GPATCH1	72	71.407	ENSMLEG00000043840	GPATCH1	69	71.407	Mandrillus_leucophaeus
ENSSARG00000004108	GPATCH1	72	56.204	ENSMZEG00005001926	gpatch1	70	56.204	Maylandia_zebra
ENSSARG00000004108	GPATCH1	70	70.706	ENSMGAG00000005775	GPATCH1	70	70.534	Meleagris_gallopavo
ENSSARG00000004108	GPATCH1	72	75.740	ENSMICG00000004829	GPATCH1	74	75.740	Microcebus_murinus
ENSSARG00000004108	GPATCH1	72	83.482	ENSMOCG00000000174	Gpatch1	72	83.482	Microtus_ochrogaster
ENSSARG00000004108	GPATCH1	70	54.545	ENSMMOG00000002140	gpatch1	72	54.985	Mola_mola
ENSSARG00000004108	GPATCH1	72	78.158	ENSMODG00000012226	GPATCH1	72	78.158	Monodelphis_domestica
ENSSARG00000004108	GPATCH1	71	56.119	ENSMALG00000014386	gpatch1	71	56.119	Monopterus_albus
ENSSARG00000004108	GPATCH1	72	81.306	ENSMUSG00000063808	Gpatch1	100	90.816	Mus_musculus
ENSSARG00000004108	GPATCH1	72	81.751	MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	Mus_pahari
ENSSARG00000004108	GPATCH1	72	81.454	MGP_SPRETEiJ_G0030681	Gpatch1	100	91.837	Mus_spretus
ENSSARG00000004108	GPATCH1	72	85.799	ENSMPUG00000007658	GPATCH1	72	85.799	Mustela_putorius_furo
ENSSARG00000004108	GPATCH1	72	85.905	ENSMLUG00000012161	GPATCH1	73	85.905	Myotis_lucifugus
ENSSARG00000004108	GPATCH1	72	83.531	ENSNGAG00000012455	Gpatch1	73	83.531	Nannospalax_galili
ENSSARG00000004108	GPATCH1	72	85.926	ENSNLEG00000007659	GPATCH1	83	89.623	Nomascus_leucogenys
ENSSARG00000004108	GPATCH1	72	66.915	ENSMEUG00000015174	GPATCH1	72	66.915	Notamacropus_eugenii
ENSSARG00000004108	GPATCH1	72	82.938	ENSODEG00000007103	GPATCH1	73	82.938	Octodon_degus
ENSSARG00000004108	GPATCH1	72	56.122	ENSONIG00000003302	gpatch1	71	57.207	Oreochromis_niloticus
ENSSARG00000004108	GPATCH1	72	78.689	ENSOANG00000012732	GPATCH1	72	78.689	Ornithorhynchus_anatinus
ENSSARG00000004108	GPATCH1	72	85.015	ENSOCUG00000015905	GPATCH1	72	85.015	Oryctolagus_cuniculus
ENSSARG00000004108	GPATCH1	72	54.438	ENSORLG00000018706	gpatch1	72	54.438	Oryzias_latipes
ENSSARG00000004108	GPATCH1	72	53.478	ENSOMEG00000022688	gpatch1	74	53.712	Oryzias_melastigma
ENSSARG00000004108	GPATCH1	72	85.163	ENSOGAG00000004016	GPATCH1	85	85.163	Otolemur_garnettii
ENSSARG00000004108	GPATCH1	72	85.007	ENSOARG00000004365	GPATCH1	72	85.007	Ovis_aries
ENSSARG00000004108	GPATCH1	72	85.207	ENSPPAG00000020990	GPATCH1	83	88.785	Pan_paniscus
ENSSARG00000004108	GPATCH1	72	84.570	ENSPPRG00000017245	GPATCH1	72	84.718	Panthera_pardus
ENSSARG00000004108	GPATCH1	72	85.757	ENSPTIG00000019649	GPATCH1	72	85.905	Panthera_tigris_altaica
ENSSARG00000004108	GPATCH1	72	85.503	ENSPTRG00000010803	GPATCH1	83	89.623	Pan_troglodytes
ENSSARG00000004108	GPATCH1	72	85.630	ENSPANG00000012374	GPATCH1	83	88.679	Papio_anubis
ENSSARG00000004108	GPATCH1	70	58.797	ENSPKIG00000020745	gpatch1	66	59.125	Paramormyrops_kingsleyae
ENSSARG00000004108	GPATCH1	70	69.692	ENSPSIG00000013433	GPATCH1	71	68.750	Pelodiscus_sinensis
ENSSARG00000004108	GPATCH1	72	82.840	ENSPEMG00000000636	Gpatch1	73	82.840	Peromyscus_maniculatus_bairdii
ENSSARG00000004108	GPATCH1	72	78.274	ENSPCIG00000021003	GPATCH1	76	78.274	Phascolarctos_cinereus
ENSSARG00000004108	GPATCH1	71	50.597	ENSPREG00000008264	gpatch1	80	50.370	Poecilia_reticulata
ENSSARG00000004108	GPATCH1	72	81.926	ENSPPYG00000009824	GPATCH1	72	81.926	Pongo_abelii
ENSSARG00000004108	GPATCH1	64	78.689	ENSPCAG00000005931	GPATCH1	65	78.689	Procavia_capensis
ENSSARG00000004108	GPATCH1	68	85.443	ENSPCOG00000009674	GPATCH1	76	85.443	Propithecus_coquereli
ENSSARG00000004108	GPATCH1	72	82.467	ENSPVAG00000017767	GPATCH1	72	82.467	Pteropus_vampyrus
ENSSARG00000004108	GPATCH1	72	56.642	ENSPNYG00000018189	gpatch1	78	56.642	Pundamilia_nyererei
ENSSARG00000004108	GPATCH1	71	56.899	ENSPNAG00000013187	gpatch1	71	57.468	Pygocentrus_nattereri
ENSSARG00000004108	GPATCH1	72	80.917	ENSRNOG00000011584	Gpatch1	72	81.953	Rattus_norvegicus
ENSSARG00000004108	GPATCH1	72	76.923	ENSRBIG00000034723	GPATCH1	73	76.923	Rhinopithecus_bieti
ENSSARG00000004108	GPATCH1	72	85.481	ENSRROG00000024428	GPATCH1	83	87.736	Rhinopithecus_roxellana
ENSSARG00000004108	GPATCH1	72	85.185	ENSSBOG00000034650	GPATCH1	72	85.185	Saimiri_boliviensis_boliviensis
ENSSARG00000004108	GPATCH1	72	77.415	ENSSHAG00000016016	GPATCH1	72	76.855	Sarcophilus_harrisii
ENSSARG00000004108	GPATCH1	70	59.220	ENSSFOG00015011535	gpatch1	70	59.342	Scleropages_formosus
ENSSARG00000004108	GPATCH1	72	51.226	ENSSMAG00000002883	gpatch1	75	51.705	Scophthalmus_maximus
ENSSARG00000004108	GPATCH1	70	56.406	ENSSDUG00000007444	gpatch1	69	56.701	Seriola_dumerili
ENSSARG00000004108	GPATCH1	70	55.835	ENSSLDG00000002856	gpatch1	80	55.982	Seriola_lalandi_dorsalis
ENSSARG00000004108	GPATCH1	72	85.905	ENSSSCG00000002865	GPATCH1	75	85.905	Sus_scrofa
ENSSARG00000004108	GPATCH1	72	69.104	ENSTGUG00000009401	GPATCH1	73	69.104	Taeniopygia_guttata
ENSSARG00000004108	GPATCH1	70	55.505	ENSTRUG00000005785	-	72	55.505	Takifugu_rubripes
ENSSARG00000004108	GPATCH1	70	55.505	ENSTRUG00000025081	gpatch1	72	55.505	Takifugu_rubripes
ENSSARG00000004108	GPATCH1	71	56.036	ENSTNIG00000002554	gpatch1	84	56.632	Tetraodon_nigroviridis
ENSSARG00000004108	GPATCH1	57	70.986	ENSTBEG00000007750	-	76	70.986	Tupaia_belangeri
ENSSARG00000004108	GPATCH1	72	74.742	ENSTTRG00000012221	GPATCH1	72	74.889	Tursiops_truncatus
ENSSARG00000004108	GPATCH1	72	85.355	ENSUMAG00000014645	GPATCH1	79	92.857	Ursus_maritimus
ENSSARG00000004108	GPATCH1	61	92.571	ENSVPAG00000010313	GPATCH1	66	92.935	Vicugna_pacos
ENSSARG00000004108	GPATCH1	72	85.630	ENSVVUG00000016572	GPATCH1	73	85.630	Vulpes_vulpes
ENSSARG00000004108	GPATCH1	70	59.788	ENSXETG00000018276	gpatch1	72	64.401	Xenopus_tropicalis