EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000004520 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 8959 bases
Position: chrGeneScaffold_1795:136-9094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004118	Methyltr_RsmB-F	PF01189.17	1.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000004516	-	1866	-	ENSSARP00000004118	622 (aa)	-	UPI000157FDD1

Gene Model

Click here to download ENSSARG00000004520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000004520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000004520	-	65	61.538	ENSAPOG00000023186	nop2	58	59.447	Acanthochromis_polyacanthus
ENSSARG00000004520	-	81	62.963	ENSAMEG00000014268	-	66	62.963	Ailuropoda_melanoleuca
ENSSARG00000004520	-	66	58.772	ENSACIG00000011803	nop2	62	59.912	Amphilophus_citrinellus
ENSSARG00000004520	-	65	60.930	ENSAPEG00000011152	nop2	58	61.860	Amphiprion_percula
ENSSARG00000004520	-	72	62.000	ENSACAG00000006397	-	63	62.000	Anolis_carolinensis
ENSSARG00000004520	-	56	80.137	ENSAMXG00000018985	nop2	61	60.256	Astyanax_mexicanus
ENSSARG00000004520	-	81	62.679	ENSBTAG00000014733	NOP2	66	62.679	Bos_taurus
ENSSARG00000004520	-	55	59.712	WBGene00021073	nol-1	55	66.667	Caenorhabditis_elegans
ENSSARG00000004520	-	81	63.554	ENSCAFG00000015034	NOP2	66	63.554	Canis_familiaris
ENSSARG00000004520	-	81	63.554	ENSCAFG00020002884	-	66	63.554	Canis_lupus_dingo
ENSSARG00000004520	-	81	63.507	ENSCHIG00000018560	-	68	63.033	Capra_hircus
ENSSARG00000004520	-	81	58.982	ENSTSYG00000006030	-	64	58.982	Carlito_syrichta
ENSSARG00000004520	-	52	92.568	ENSCAPG00000011953	-	68	59.538	Cavia_aperea
ENSSARG00000004520	-	75	65.366	ENSCPOG00000020690	-	67	65.366	Cavia_porcellus
ENSSARG00000004520	-	83	62.381	ENSCLAG00000014440	-	69	61.905	Chinchilla_lanigera
ENSSARG00000004520	-	81	63.507	ENSCSAG00000010484	-	66	63.981	Chlorocebus_sabaeus
ENSSARG00000004520	-	52	70.984	ENSCPBG00000027725	-	58	70.984	Chrysemys_picta_bellii
ENSSARG00000004520	-	56	70.629	ENSCING00000008548	-	53	70.629	Ciona_intestinalis
ENSSARG00000004520	-	56	92.361	ENSCANG00000038803	-	56	92.361	Colobus_angolensis_palliatus
ENSSARG00000004520	-	82	62.136	ENSCGRG00001020970	Nop2	68	62.136	Cricetulus_griseus_chok1gshd
ENSSARG00000004520	-	82	62.136	ENSCGRG00000015782	Nop2	68	62.136	Cricetulus_griseus_crigri
ENSSARG00000004520	-	54	53.165	ENSCSEG00000020126	nop2	54	50.785	Cynoglossus_semilaevis
ENSSARG00000004520	-	72	51.899	ENSCVAG00000001162	nop2	62	51.203	Cyprinodon_variegatus
ENSSARG00000004520	-	66	63.158	ENSDARG00000043304	nop2	54	62.857	Danio_rerio
ENSSARG00000004520	-	82	63.333	ENSDNOG00000001133	-	66	62.857	Dasypus_novemcinctus
ENSSARG00000004520	-	53	59.471	ENSEBUG00000009820	nop2	56	59.471	Eptatretus_burgeri
ENSSARG00000004520	-	83	65.072	ENSEASG00005016153	-	68	64.593	Equus_asinus_asinus
ENSSARG00000004520	-	81	65.049	ENSECAG00000012639	NOP2	65	65.049	Equus_caballus
ENSSARG00000004520	-	86	74.408	ENSEEUG00000011692	-	82	74.882	Erinaceus_europaeus
ENSSARG00000004520	-	81	63.033	ENSFCAG00000006876	-	66	63.507	Felis_catus
ENSSARG00000004520	-	58	81.875	ENSFALG00000004797	-	59	81.875	Ficedula_albicollis
ENSSARG00000004520	-	58	59.649	ENSFHEG00000014327	nop2	70	59.649	Fundulus_heteroclitus
ENSSARG00000004520	-	56	84.354	ENSGALG00000037807	-	65	84.354	Gallus_gallus
ENSSARG00000004520	-	61	77.011	ENSGAGG00000001438	-	61	63.223	Gopherus_agassizii
ENSSARG00000004520	-	56	93.056	ENSGGOG00000001926	NOP2	56	93.056	Gorilla_gorilla
ENSSARG00000004520	-	58	50.226	ENSHBUG00000014908	nop2	58	50.226	Haplochromis_burtoni
ENSSARG00000004520	-	80	51.178	ENSHCOG00000017852	nop2	65	51.178	Hippocampus_comes
ENSSARG00000004520	-	61	71.591	ENSIPUG00000008198	nop2	60	62.212	Ictalurus_punctatus
ENSSARG00000004520	-	58	63.877	ENSLBEG00000007281	nop2	57	62.996	Labrus_bergylta
ENSSARG00000004520	-	50	82.692	ENSLOCG00000007050	nop2	55	82.692	Lepisosteus_oculatus
ENSSARG00000004520	-	81	63.636	ENSLAFG00000002784	-	69	63.158	Loxodonta_africana
ENSSARG00000004520	-	58	61.572	ENSMAMG00000001909	nop2	57	62.281	Mastacembelus_armatus
ENSSARG00000004520	-	58	60.633	ENSMZEG00005017552	nop2	60	60.633	Maylandia_zebra
ENSSARG00000004520	-	56	87.500	ENSMGAG00000014082	-	75	87.500	Meleagris_gallopavo
ENSSARG00000004520	-	82	65.366	ENSMICG00000006570	-	64	65.366	Microcebus_murinus
ENSSARG00000004520	-	82	62.319	ENSMOCG00000017237	Nop2	69	62.319	Microtus_ochrogaster
ENSSARG00000004520	-	75	57.762	ENSMODG00000018077	-	51	84.615	Monodelphis_domestica
ENSSARG00000004520	-	75	62.679	ENSMUSG00000038279	Nop2	69	62.679	Mus_musculus
ENSSARG00000004520	-	81	62.791	ENSMPUG00000016865	-	66	63.134	Mustela_putorius_furo
ENSSARG00000004520	-	81	60.060	ENSMLUG00000014333	-	63	60.060	Myotis_lucifugus
ENSSARG00000004520	-	86	60.377	ENSNGAG00000019010	Nop2	71	60.377	Nannospalax_galili
ENSSARG00000004520	-	58	50.679	ENSNBRG00000001113	nop2	57	50.226	Neolamprologus_brichardi
ENSSARG00000004520	-	57	91.946	ENSNLEG00000004242	-	57	91.946	Nomascus_leucogenys
ENSSARG00000004520	-	67	66.204	ENSMEUG00000015287	-	61	66.204	Notamacropus_eugenii
ENSSARG00000004520	-	75	89.744	ENSOPRG00000003412	-	58	89.744	Ochotona_princeps
ENSSARG00000004520	-	51	74.545	ENSONIG00000012896	nop2	53	72.000	Oreochromis_niloticus
ENSSARG00000004520	-	81	64.251	ENSOCUG00000008203	-	66	64.251	Oryctolagus_cuniculus
ENSSARG00000004520	-	81	62.736	ENSOARG00000007641	-	67	62.264	Ovis_aries
ENSSARG00000004520	-	81	65.550	ENSPPRG00000012300	-	64	65.550	Panthera_pardus
ENSSARG00000004520	-	81	65.366	ENSPTIG00000020543	-	64	65.366	Panthera_tigris_altaica
ENSSARG00000004520	-	56	93.056	ENSPANG00000024426	-	56	93.056	Papio_anubis
ENSSARG00000004520	-	56	86.395	ENSPSIG00000016127	-	59	86.395	Pelodiscus_sinensis
ENSSARG00000004520	-	81	62.500	ENSPEMG00000013138	Nop2	70	62.500	Peromyscus_maniculatus_bairdii
ENSSARG00000004520	-	66	59.740	ENSPFOG00000013054	nop2	60	59.740	Poecilia_formosa
ENSSARG00000004520	-	58	61.404	ENSPLAG00000005975	nop2	58	61.404	Poecilia_latipinna
ENSSARG00000004520	-	58	60.965	ENSPMEG00000016775	nop2	57	60.965	Poecilia_mexicana
ENSSARG00000004520	-	54	60.811	ENSPREG00000010428	nop2	51	60.811	Poecilia_reticulata
ENSSARG00000004520	-	81	64.078	ENSPPYG00000004191	-	66	63.462	Pongo_abelii
ENSSARG00000004520	-	86	58.454	ENSPCAG00000007033	-	67	57.212	Procavia_capensis
ENSSARG00000004520	-	58	49.774	ENSPNYG00000023163	nop2	58	49.774	Pundamilia_nyererei
ENSSARG00000004520	-	66	61.244	ENSPNAG00000019880	nop2	55	61.244	Pygocentrus_nattereri
ENSSARG00000004520	-	70	72.294	ENSRNOG00000018453	Nop2	67	59.709	Rattus_norvegicus
ENSSARG00000004520	-	56	92.361	ENSRROG00000041019	-	56	92.361	Rhinopithecus_roxellana
ENSSARG00000004520	-	81	63.462	ENSSBOG00000034622	-	66	62.981	Saimiri_boliviensis_boliviensis
ENSSARG00000004520	-	56	86.806	ENSSHAG00000015028	-	56	86.806	Sarcophilus_harrisii
ENSSARG00000004520	-	61	69.231	ENSSFOG00015002458	nop2	66	50.831	Scleropages_formosus
ENSSARG00000004520	-	66	56.031	ENSSMAG00000011738	nop2	58	56.031	Scophthalmus_maximus
ENSSARG00000004520	-	66	58.222	ENSSPAG00000005491	nop2	56	60.181	Stegastes_partitus
ENSSARG00000004520	-	81	65.049	ENSSSCG00000000696	-	81	65.049	Sus_scrofa
ENSSARG00000004520	-	57	85.235	ENSTGUG00000013336	-	60	85.235	Taeniopygia_guttata
ENSSARG00000004520	-	70	49.791	ENSTRUG00000002011	nop2	64	48.669	Takifugu_rubripes
ENSSARG00000004520	-	52	72.727	ENSTNIG00000008046	nop2	57	63.054	Tetraodon_nigroviridis
ENSSARG00000004520	-	61	57.212	ENSTBEG00000010989	-	51	56.731	Tupaia_belangeri
ENSSARG00000004520	-	75	93.056	ENSTTRG00000016100	-	55	93.056	Tursiops_truncatus
ENSSARG00000004520	-	81	65.238	ENSUAMG00000016105	-	66	64.762	Ursus_americanus
ENSSARG00000004520	-	81	64.286	ENSUMAG00000007220	-	66	63.810	Ursus_maritimus
ENSSARG00000004520	-	81	65.246	ENSVVUG00000011466	-	66	65.246	Vulpes_vulpes
ENSSARG00000004520	-	57	78.378	ENSXETG00000011515	nop2	59	78.378	Xenopus_tropicalis
ENSSARG00000004520	-	67	53.358	ENSXMAG00000011483	nop2	61	53.358	Xiphophorus_maculatus