EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000004660 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 29586 bases
Position: chrGeneScaffold_3200:4628-34213
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004261	zf-CCCH	PF00642.24	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000004687	RC3H1-201	3321	-	ENSSARP00000004261	1106 (aa)	-	UPI00015805F6

Gene Model

Click here to download ENSSARG00000004660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000004660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000004660	RC3H1	72	74.775	ENSSARG00000012329	RC3H2	67	74.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000004660	RC3H1	86	86.712	ENSG00000135870	RC3H1	87	86.712	Homo_sapiens
ENSSARG00000004660	RC3H1	86	86.712	ENSAMEG00000015657	RC3H1	87	86.712	Ailuropoda_melanoleuca
ENSSARG00000004660	RC3H1	86	85.906	ENSAPLG00000005341	RC3H1	87	85.906	Anas_platyrhynchos
ENSSARG00000004660	RC3H1	86	86.130	ENSACAG00000015271	RC3H1	87	86.130	Anolis_carolinensis
ENSSARG00000004660	RC3H1	86	86.712	ENSANAG00000036716	RC3H1	87	86.712	Aotus_nancymaae
ENSSARG00000004660	RC3H1	86	86.486	ENSBTAG00000052708	RC3H1	87	86.486	Bos_taurus
ENSSARG00000004660	RC3H1	86	86.712	ENSCJAG00000009106	RC3H1	87	86.712	Callithrix_jacchus
ENSSARG00000004660	RC3H1	86	86.712	ENSCAFG00000014434	RC3H1	87	86.712	Canis_familiaris
ENSSARG00000004660	RC3H1	86	86.712	ENSCAFG00020017112	RC3H1	99	85.811	Canis_lupus_dingo
ENSSARG00000004660	RC3H1	86	86.261	ENSCHIG00000002873	RC3H1	87	86.261	Capra_hircus
ENSSARG00000004660	RC3H1	86	86.712	ENSTSYG00000003913	RC3H1	87	86.712	Carlito_syrichta
ENSSARG00000004660	RC3H1	86	86.261	ENSCPOG00000004349	RC3H1	86	86.261	Cavia_porcellus
ENSSARG00000004660	RC3H1	86	86.712	ENSCCAG00000025652	RC3H1	87	86.712	Cebus_capucinus
ENSSARG00000004660	RC3H1	86	86.712	ENSCATG00000033497	RC3H1	87	86.712	Cercocebus_atys
ENSSARG00000004660	RC3H1	86	86.712	ENSCLAG00000011267	RC3H1	87	86.712	Chinchilla_lanigera
ENSSARG00000004660	RC3H1	82	86.712	ENSCSAG00000011823	RC3H1	73	86.712	Chlorocebus_sabaeus
ENSSARG00000004660	RC3H1	86	86.261	ENSCPBG00000014670	RC3H1	95	86.261	Chrysemys_picta_bellii
ENSSARG00000004660	RC3H1	86	86.712	ENSCANG00000032120	RC3H1	87	86.712	Colobus_angolensis_palliatus
ENSSARG00000004660	RC3H1	86	86.712	ENSCGRG00001020812	Rc3h1	87	86.712	Cricetulus_griseus_chok1gshd
ENSSARG00000004660	RC3H1	86	86.712	ENSCGRG00000011952	Rc3h1	87	86.712	Cricetulus_griseus_crigri
ENSSARG00000004660	RC3H1	86	86.937	ENSDORG00000004855	Rc3h1	87	86.937	Dipodomys_ordii
ENSSARG00000004660	RC3H1	64	94.785	ENSETEG00000012064	RC3H1	67	94.785	Echinops_telfairi
ENSSARG00000004660	RC3H1	86	86.712	ENSEASG00005017000	RC3H1	87	86.712	Equus_asinus_asinus
ENSSARG00000004660	RC3H1	86	86.486	ENSECAG00000021208	RC3H1	87	86.486	Equus_caballus
ENSSARG00000004660	RC3H1	69	88.112	ENSEEUG00000014861	RC3H1	80	74.324	Erinaceus_europaeus
ENSSARG00000004660	RC3H1	86	86.486	ENSFCAG00000014924	RC3H1	87	86.486	Felis_catus
ENSSARG00000004660	RC3H1	86	86.486	ENSFALG00000002947	RC3H1	87	86.486	Ficedula_albicollis
ENSSARG00000004660	RC3H1	86	86.486	ENSFDAG00000013303	RC3H1	87	86.486	Fukomys_damarensis
ENSSARG00000004660	RC3H1	86	86.486	ENSGALG00000004587	RC3H1	87	86.486	Gallus_gallus
ENSSARG00000004660	RC3H1	86	86.261	ENSGAGG00000018194	RC3H1	94	86.261	Gopherus_agassizii
ENSSARG00000004660	RC3H1	86	86.712	ENSGGOG00000005735	RC3H1	86	86.712	Gorilla_gorilla
ENSSARG00000004660	RC3H1	75	78.873	ENSHGLG00000004183	-	84	78.873	Heterocephalus_glaber_female
ENSSARG00000004660	RC3H1	86	86.712	ENSHGLG00100008577	RC3H1	87	86.712	Heterocephalus_glaber_male
ENSSARG00000004660	RC3H1	86	86.486	ENSSTOG00000016033	RC3H1	87	86.486	Ictidomys_tridecemlineatus
ENSSARG00000004660	RC3H1	86	86.486	ENSJJAG00000018915	Rc3h1	87	86.486	Jaculus_jaculus
ENSSARG00000004660	RC3H1	80	85.360	ENSLACG00000016186	RC3H1	81	85.360	Latimeria_chalumnae
ENSSARG00000004660	RC3H1	83	86.712	ENSLAFG00000004367	RC3H1	86	86.712	Loxodonta_africana
ENSSARG00000004660	RC3H1	86	86.712	ENSMFAG00000033725	RC3H1	87	86.712	Macaca_fascicularis
ENSSARG00000004660	RC3H1	86	86.712	ENSMMUG00000000630	RC3H1	87	86.712	Macaca_mulatta
ENSSARG00000004660	RC3H1	86	86.712	ENSMNEG00000035968	RC3H1	87	86.712	Macaca_nemestrina
ENSSARG00000004660	RC3H1	86	86.712	ENSMLEG00000037455	RC3H1	87	86.712	Mandrillus_leucophaeus
ENSSARG00000004660	RC3H1	86	86.712	ENSMAUG00000020864	Rc3h1	79	86.712	Mesocricetus_auratus
ENSSARG00000004660	RC3H1	86	86.712	ENSMICG00000003000	RC3H1	87	86.712	Microcebus_murinus
ENSSARG00000004660	RC3H1	75	93.865	ENSMOCG00000016587	Rc3h1	80	93.865	Microtus_ochrogaster
ENSSARG00000004660	RC3H1	85	86.261	ENSMODG00000004289	RC3H1	87	86.261	Monodelphis_domestica
ENSSARG00000004660	RC3H1	86	86.712	MGP_CAROLIEiJ_G0014756	Rc3h1	87	86.712	Mus_caroli
ENSSARG00000004660	RC3H1	86	86.712	ENSMUSG00000040423	Rc3h1	87	86.712	Mus_musculus
ENSSARG00000004660	RC3H1	86	86.712	MGP_PahariEiJ_G0027992	Rc3h1	87	86.712	Mus_pahari
ENSSARG00000004660	RC3H1	86	86.712	MGP_SPRETEiJ_G0015563	Rc3h1	87	86.712	Mus_spretus
ENSSARG00000004660	RC3H1	86	86.486	ENSMPUG00000004747	RC3H1	87	86.486	Mustela_putorius_furo
ENSSARG00000004660	RC3H1	86	86.712	ENSMLUG00000011127	RC3H1	87	86.712	Myotis_lucifugus
ENSSARG00000004660	RC3H1	86	86.712	ENSNGAG00000011135	Rc3h1	87	86.712	Nannospalax_galili
ENSSARG00000004660	RC3H1	86	86.712	ENSNLEG00000015327	RC3H1	87	86.712	Nomascus_leucogenys
ENSSARG00000004660	RC3H1	86	87.330	ENSOPRG00000013068	RC3H1	87	87.330	Ochotona_princeps
ENSSARG00000004660	RC3H1	86	86.712	ENSODEG00000014185	RC3H1	87	86.712	Octodon_degus
ENSSARG00000004660	RC3H1	86	86.261	ENSOANG00000000924	RC3H1	87	86.261	Ornithorhynchus_anatinus
ENSSARG00000004660	RC3H1	85	86.712	ENSOCUG00000004930	RC3H1	85	86.712	Oryctolagus_cuniculus
ENSSARG00000004660	RC3H1	86	81.690	ENSOGAG00000004044	RC3H1	87	81.690	Otolemur_garnettii
ENSSARG00000004660	RC3H1	86	86.486	ENSOARG00000013011	RC3H1	87	86.486	Ovis_aries
ENSSARG00000004660	RC3H1	86	86.712	ENSPPAG00000039253	RC3H1	87	86.712	Pan_paniscus
ENSSARG00000004660	RC3H1	86	86.712	ENSPPRG00000009007	RC3H1	87	86.712	Panthera_pardus
ENSSARG00000004660	RC3H1	86	86.712	ENSPTIG00000015326	RC3H1	87	86.712	Panthera_tigris_altaica
ENSSARG00000004660	RC3H1	86	86.712	ENSPTRG00000001702	RC3H1	87	86.712	Pan_troglodytes
ENSSARG00000004660	RC3H1	86	86.712	ENSPANG00000008886	RC3H1	87	86.712	Papio_anubis
ENSSARG00000004660	RC3H1	86	86.036	ENSPSIG00000016181	RC3H1	87	86.036	Pelodiscus_sinensis
ENSSARG00000004660	RC3H1	86	86.712	ENSPEMG00000011966	Rc3h1	87	86.712	Peromyscus_maniculatus_bairdii
ENSSARG00000004660	RC3H1	58	86.261	ENSPCIG00000002058	RC3H1	94	85.360	Phascolarctos_cinereus
ENSSARG00000004660	RC3H1	86	86.712	ENSPPYG00000000490	RC3H1	86	86.712	Pongo_abelii
ENSSARG00000004660	RC3H1	63	90.426	ENSPCAG00000010775	RC3H1	69	90.426	Procavia_capensis
ENSSARG00000004660	RC3H1	68	93.117	ENSPCOG00000021795	RC3H1	81	93.117	Propithecus_coquereli
ENSSARG00000004660	RC3H1	86	76.623	ENSPVAG00000007593	RC3H1	87	77.039	Pteropus_vampyrus
ENSSARG00000004660	RC3H1	77	81.081	ENSPNAG00000023439	rc3h1a	95	81.081	Pygocentrus_nattereri
ENSSARG00000004660	RC3H1	86	86.712	ENSRBIG00000037743	RC3H1	87	86.712	Rhinopithecus_bieti
ENSSARG00000004660	RC3H1	86	86.712	ENSRROG00000036546	RC3H1	87	86.712	Rhinopithecus_roxellana
ENSSARG00000004660	RC3H1	76	94.785	ENSSBOG00000010664	RC3H1	81	94.785	Saimiri_boliviensis_boliviensis
ENSSARG00000004660	RC3H1	85	86.261	ENSSHAG00000007589	RC3H1	92	86.261	Sarcophilus_harrisii
ENSSARG00000004660	RC3H1	86	79.167	ENSSPUG00000018472	RC3H1	86	79.167	Sphenodon_punctatus
ENSSARG00000004660	RC3H1	86	86.712	ENSSSCG00000015498	RC3H1	87	86.712	Sus_scrofa
ENSSARG00000004660	RC3H1	86	86.486	ENSTGUG00000004090	RC3H1	87	86.486	Taeniopygia_guttata
ENSSARG00000004660	RC3H1	79	86.712	ENSTBEG00000005015	RC3H1	78	86.712	Tupaia_belangeri
ENSSARG00000004660	RC3H1	86	86.486	ENSTTRG00000008572	RC3H1	87	86.486	Tursiops_truncatus
ENSSARG00000004660	RC3H1	86	86.712	ENSUAMG00000019525	RC3H1	87	86.712	Ursus_americanus
ENSSARG00000004660	RC3H1	86	86.712	ENSUMAG00000020087	RC3H1	87	86.712	Ursus_maritimus
ENSSARG00000004660	RC3H1	86	86.036	ENSVPAG00000002591	RC3H1	87	86.036	Vicugna_pacos
ENSSARG00000004660	RC3H1	86	86.712	ENSVVUG00000014201	RC3H1	91	85.811	Vulpes_vulpes
ENSSARG00000004660	RC3H1	91	85.268	ENSXETG00000020030	rc3h1	92	85.268	Xenopus_tropicalis