EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000004983 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 37947 bases
Position: chrGeneScaffold_2909:346962-384908
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004528	MRP-S27	PF10037.9	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000004991	PTCD2-201	933	-	ENSSARP00000004528	311 (aa)	-	UPI0001582807

Gene Model

Click here to download ENSSARG00000004983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000004983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000004983	PTCD2	99	70.323	ENSG00000049883	PTCD2	96	78.065	Homo_sapiens
ENSSARG00000004983	PTCD2	100	69.649	ENSAMEG00000007194	PTCD2	81	69.649	Ailuropoda_melanoleuca
ENSSARG00000004983	PTCD2	86	38.433	ENSACIG00000002053	ptcd2	81	38.433	Amphilophus_citrinellus
ENSSARG00000004983	PTCD2	91	50.000	ENSACAG00000009747	PTCD2	73	50.000	Anolis_carolinensis
ENSSARG00000004983	PTCD2	99	71.521	ENSANAG00000029353	PTCD2	80	71.521	Aotus_nancymaae
ENSSARG00000004983	PTCD2	87	41.241	ENSACLG00000027742	ptcd2	71	41.241	Astatotilapia_calliptera
ENSSARG00000004983	PTCD2	91	41.197	ENSAMXG00000029404	ptcd2	56	49.282	Astyanax_mexicanus
ENSSARG00000004983	PTCD2	99	70.645	ENSBTAG00000014675	PTCD2	81	70.645	Bos_taurus
ENSSARG00000004983	PTCD2	99	71.935	ENSCJAG00000016364	PTCD2	80	71.935	Callithrix_jacchus
ENSSARG00000004983	PTCD2	99	68.065	ENSCAFG00000007982	PTCD2	73	68.065	Canis_familiaris
ENSSARG00000004983	PTCD2	87	69.118	ENSCAFG00020019147	PTCD2	76	69.118	Canis_lupus_dingo
ENSSARG00000004983	PTCD2	99	71.290	ENSCHIG00000017118	PTCD2	81	71.290	Capra_hircus
ENSSARG00000004983	PTCD2	99	63.430	ENSCPOG00000040168	PTCD2	81	63.430	Cavia_porcellus
ENSSARG00000004983	PTCD2	98	68.831	ENSCCAG00000021996	-	95	68.831	Cebus_capucinus
ENSSARG00000004983	PTCD2	99	70.550	ENSCCAG00000029389	-	80	70.550	Cebus_capucinus
ENSSARG00000004983	PTCD2	99	68.608	ENSCATG00000019069	PTCD2	81	68.608	Cercocebus_atys
ENSSARG00000004983	PTCD2	99	63.430	ENSCLAG00000000072	PTCD2	81	63.430	Chinchilla_lanigera
ENSSARG00000004983	PTCD2	99	69.579	ENSCSAG00000015623	PTCD2	81	69.579	Chlorocebus_sabaeus
ENSSARG00000004983	PTCD2	67	75.294	ENSCHOG00000010634	PTCD2	61	75.294	Choloepus_hoffmanni
ENSSARG00000004983	PTCD2	99	49.355	ENSCPBG00000000216	PTCD2	84	49.355	Chrysemys_picta_bellii
ENSSARG00000004983	PTCD2	99	68.932	ENSCANG00000035636	PTCD2	80	68.932	Colobus_angolensis_palliatus
ENSSARG00000004983	PTCD2	94	64.164	ENSCGRG00001015289	Ptcd2	64	64.164	Cricetulus_griseus_chok1gshd
ENSSARG00000004983	PTCD2	94	64.164	ENSCGRG00000006193	Ptcd2	64	64.164	Cricetulus_griseus_crigri
ENSSARG00000004983	PTCD2	87	40.146	ENSCVAG00000001285	ptcd2	70	40.146	Cyprinodon_variegatus
ENSSARG00000004983	PTCD2	95	41.806	ENSDARG00000035391	ptcd2	58	48.230	Danio_rerio
ENSSARG00000004983	PTCD2	99	65.372	ENSDNOG00000008719	PTCD2	81	65.372	Dasypus_novemcinctus
ENSSARG00000004983	PTCD2	99	67.412	ENSDORG00000004921	Ptcd2	81	67.412	Dipodomys_ordii
ENSSARG00000004983	PTCD2	100	71.656	ENSETEG00000016542	PTCD2	81	71.656	Echinops_telfairi
ENSSARG00000004983	PTCD2	99	67.638	ENSEASG00005018038	PTCD2	81	67.638	Equus_asinus_asinus
ENSSARG00000004983	PTCD2	99	66.987	ENSECAG00000007022	PTCD2	80	66.987	Equus_caballus
ENSSARG00000004983	PTCD2	99	63.871	ENSEEUG00000014031	PTCD2	80	63.871	Erinaceus_europaeus
ENSSARG00000004983	PTCD2	89	41.577	ENSELUG00000003584	ptcd2	73	41.577	Esox_lucius
ENSSARG00000004983	PTCD2	100	61.981	ENSFCAG00000045432	PTCD2	66	61.981	Felis_catus
ENSSARG00000004983	PTCD2	81	47.431	ENSFALG00000010299	PTCD2	77	47.431	Ficedula_albicollis
ENSSARG00000004983	PTCD2	99	65.372	ENSFDAG00000018461	PTCD2	81	65.372	Fukomys_damarensis
ENSSARG00000004983	PTCD2	87	43.682	ENSGMOG00000003637	ptcd2	53	50.980	Gadus_morhua
ENSSARG00000004983	PTCD2	89	47.143	ENSGALG00000038260	PTCD2	81	45.484	Gallus_gallus
ENSSARG00000004983	PTCD2	98	51.456	ENSGAGG00000021952	PTCD2	79	51.456	Gopherus_agassizii
ENSSARG00000004983	PTCD2	99	70.323	ENSGGOG00000010695	PTCD2	80	70.323	Gorilla_gorilla
ENSSARG00000004983	PTCD2	87	40.876	ENSHBUG00000009191	ptcd2	71	40.876	Haplochromis_burtoni
ENSSARG00000004983	PTCD2	99	66.019	ENSHGLG00000001234	PTCD2	81	66.019	Heterocephalus_glaber_female
ENSSARG00000004983	PTCD2	99	66.019	ENSHGLG00100015419	PTCD2	81	66.019	Heterocephalus_glaber_male
ENSSARG00000004983	PTCD2	87	44.000	ENSHCOG00000001703	ptcd2	71	44.000	Hippocampus_comes
ENSSARG00000004983	PTCD2	94	36.455	ENSIPUG00000006080	ptcd2	52	47.475	Ictalurus_punctatus
ENSSARG00000004983	PTCD2	98	70.033	ENSSTOG00000006596	PTCD2	80	70.033	Ictidomys_tridecemlineatus
ENSSARG00000004983	PTCD2	99	66.343	ENSJJAG00000024388	Ptcd2	81	66.343	Jaculus_jaculus
ENSSARG00000004983	PTCD2	95	39.262	ENSKMAG00000009329	ptcd2	78	39.262	Kryptolebias_marmoratus
ENSSARG00000004983	PTCD2	91	40.141	ENSLBEG00000024871	ptcd2	72	40.141	Labrus_bergylta
ENSSARG00000004983	PTCD2	95	48.333	ENSLOCG00000011122	ptcd2	76	48.980	Lepisosteus_oculatus
ENSSARG00000004983	PTCD2	99	67.314	ENSLAFG00000004115	PTCD2	99	67.314	Loxodonta_africana
ENSSARG00000004983	PTCD2	99	68.932	ENSMFAG00000031516	PTCD2	80	68.932	Macaca_fascicularis
ENSSARG00000004983	PTCD2	99	68.285	ENSMNEG00000007537	PTCD2	81	68.285	Macaca_nemestrina
ENSSARG00000004983	PTCD2	99	68.932	ENSMLEG00000031093	PTCD2	80	68.932	Mandrillus_leucophaeus
ENSSARG00000004983	PTCD2	87	44.161	ENSMAMG00000018529	ptcd2	72	44.161	Mastacembelus_armatus
ENSSARG00000004983	PTCD2	87	41.241	ENSMZEG00005003625	ptcd2	71	41.241	Maylandia_zebra
ENSSARG00000004983	PTCD2	87	47.810	ENSMGAG00000005033	PTCD2	79	47.810	Meleagris_gallopavo
ENSSARG00000004983	PTCD2	79	74.038	ENSMAUG00000020253	Ptcd2	77	74.038	Mesocricetus_auratus
ENSSARG00000004983	PTCD2	99	69.677	ENSMICG00000004535	PTCD2	80	69.677	Microcebus_murinus
ENSSARG00000004983	PTCD2	99	62.136	ENSMOCG00000019985	Ptcd2	81	62.136	Microtus_ochrogaster
ENSSARG00000004983	PTCD2	99	52.258	ENSMODG00000001695	PTCD2	81	52.258	Monodelphis_domestica
ENSSARG00000004983	PTCD2	87	42.336	ENSMALG00000022372	ptcd2	72	42.336	Monopterus_albus
ENSSARG00000004983	PTCD2	99	63.430	MGP_CAROLIEiJ_G0018829	Ptcd2	81	63.430	Mus_caroli
ENSSARG00000004983	PTCD2	99	62.460	ENSMUSG00000021650	Ptcd2	81	62.460	Mus_musculus
ENSSARG00000004983	PTCD2	99	64.725	MGP_PahariEiJ_G0015904	Ptcd2	81	64.725	Mus_pahari
ENSSARG00000004983	PTCD2	99	62.783	MGP_SPRETEiJ_G0019711	Ptcd2	81	62.783	Mus_spretus
ENSSARG00000004983	PTCD2	99	71.521	ENSMPUG00000014401	PTCD2	81	71.521	Mustela_putorius_furo
ENSSARG00000004983	PTCD2	100	69.010	ENSMLUG00000007374	PTCD2	81	69.010	Myotis_lucifugus
ENSSARG00000004983	PTCD2	99	62.136	ENSNGAG00000005027	Ptcd2	81	62.136	Nannospalax_galili
ENSSARG00000004983	PTCD2	82	40.625	ENSNBRG00000000092	-	81	40.625	Neolamprologus_brichardi
ENSSARG00000004983	PTCD2	87	41.241	ENSNBRG00000008174	ptcd2	72	41.241	Neolamprologus_brichardi
ENSSARG00000004983	PTCD2	99	69.677	ENSNLEG00000004516	PTCD2	80	69.677	Nomascus_leucogenys
ENSSARG00000004983	PTCD2	100	64.537	ENSOPRG00000007290	PTCD2	81	64.537	Ochotona_princeps
ENSSARG00000004983	PTCD2	99	65.696	ENSODEG00000016417	PTCD2	81	65.696	Octodon_degus
ENSSARG00000004983	PTCD2	87	41.606	ENSONIG00000011269	ptcd2	80	41.606	Oreochromis_niloticus
ENSSARG00000004983	PTCD2	93	67.698	ENSOCUG00000007970	PTCD2	81	66.667	Oryctolagus_cuniculus
ENSSARG00000004983	PTCD2	67	49.761	ENSORLG00000003851	ptcd2	55	49.246	Oryzias_latipes
ENSSARG00000004983	PTCD2	67	49.761	ENSORLG00020009823	ptcd2	56	49.246	Oryzias_latipes_hni
ENSSARG00000004983	PTCD2	68	47.887	ENSORLG00015016777	ptcd2	57	47.291	Oryzias_latipes_hsok
ENSSARG00000004983	PTCD2	99	65.806	ENSOGAG00000008390	PTCD2	80	65.806	Otolemur_garnettii
ENSSARG00000004983	PTCD2	100	71.019	ENSOARG00000005087	PTCD2	81	71.019	Ovis_aries
ENSSARG00000004983	PTCD2	99	70.323	ENSPPAG00000028480	PTCD2	80	70.323	Pan_paniscus
ENSSARG00000004983	PTCD2	99	70.000	ENSPTRG00000016968	PTCD2	80	70.000	Pan_troglodytes
ENSSARG00000004983	PTCD2	86	69.373	ENSPANG00000006611	PTCD2	70	69.373	Papio_anubis
ENSSARG00000004983	PTCD2	90	45.196	ENSPKIG00000019896	ptcd2	73	45.196	Paramormyrops_kingsleyae
ENSSARG00000004983	PTCD2	90	54.255	ENSPSIG00000014559	PTCD2	87	54.255	Pelodiscus_sinensis
ENSSARG00000004983	PTCD2	99	63.107	ENSPEMG00000000884	Ptcd2	80	63.107	Peromyscus_maniculatus_bairdii
ENSSARG00000004983	PTCD2	99	54.693	ENSPCIG00000029047	PTCD2	81	54.693	Phascolarctos_cinereus
ENSSARG00000004983	PTCD2	87	40.876	ENSPLAG00000010456	ptcd2	72	40.876	Poecilia_latipinna
ENSSARG00000004983	PTCD2	87	41.241	ENSPREG00000021797	ptcd2	70	41.241	Poecilia_reticulata
ENSSARG00000004983	PTCD2	99	58.065	ENSPPYG00000015543	PTCD2	77	58.065	Pongo_abelii
ENSSARG00000004983	PTCD2	99	55.806	ENSPCAG00000006806	PTCD2	99	55.806	Procavia_capensis
ENSSARG00000004983	PTCD2	100	71.246	ENSPVAG00000010935	PTCD2	81	71.246	Pteropus_vampyrus
ENSSARG00000004983	PTCD2	87	41.241	ENSPNYG00000003122	ptcd2	71	41.241	Pundamilia_nyererei
ENSSARG00000004983	PTCD2	95	41.611	ENSPNAG00000021490	ptcd2	77	41.611	Pygocentrus_nattereri
ENSSARG00000004983	PTCD2	99	64.423	ENSRNOG00000028403	Ptcd2	81	64.423	Rattus_norvegicus
ENSSARG00000004983	PTCD2	99	62.460	ENSRBIG00000032929	PTCD2	79	62.460	Rhinopithecus_bieti
ENSSARG00000004983	PTCD2	99	68.932	ENSRROG00000000080	PTCD2	81	68.932	Rhinopithecus_roxellana
ENSSARG00000004983	PTCD2	99	70.227	ENSSBOG00000018911	PTCD2	81	70.227	Saimiri_boliviensis_boliviensis
ENSSARG00000004983	PTCD2	99	53.846	ENSSHAG00000003833	PTCD2	81	53.846	Sarcophilus_harrisii
ENSSARG00000004983	PTCD2	88	43.116	ENSSFOG00015015415	ptcd2	51	52.821	Scleropages_formosus
ENSSARG00000004983	PTCD2	87	41.758	ENSSMAG00000010350	ptcd2	71	41.758	Scophthalmus_maximus
ENSSARG00000004983	PTCD2	87	43.956	ENSSDUG00000008142	ptcd2	68	43.956	Seriola_dumerili
ENSSARG00000004983	PTCD2	87	43.956	ENSSLDG00000015284	ptcd2	72	43.956	Seriola_lalandi_dorsalis
ENSSARG00000004983	PTCD2	99	47.249	ENSSPUG00000000176	PTCD2	79	47.249	Sphenodon_punctatus
ENSSARG00000004983	PTCD2	100	70.607	ENSSSCG00000016975	PTCD2	73	70.607	Sus_scrofa
ENSSARG00000004983	PTCD2	87	47.985	ENSTGUG00000005705	PTCD2	79	47.985	Taeniopygia_guttata
ENSSARG00000004983	PTCD2	95	68.013	ENSTBEG00000016559	PTCD2	77	68.013	Tupaia_belangeri
ENSSARG00000004983	PTCD2	99	69.872	ENSTTRG00000011851	PTCD2	80	69.872	Tursiops_truncatus
ENSSARG00000004983	PTCD2	100	69.329	ENSUAMG00000007583	PTCD2	73	69.329	Ursus_americanus
ENSSARG00000004983	PTCD2	99	69.256	ENSUMAG00000007666	PTCD2	81	69.256	Ursus_maritimus
ENSSARG00000004983	PTCD2	100	69.427	ENSVPAG00000009597	PTCD2	81	69.427	Vicugna_pacos
ENSSARG00000004983	PTCD2	99	67.638	ENSVVUG00000007299	-	81	67.638	Vulpes_vulpes
ENSSARG00000004983	PTCD2	91	49.648	ENSXETG00000031652	PTCD2	74	49.648	Xenopus_tropicalis
ENSSARG00000004983	PTCD2	87	40.876	ENSXMAG00000005940	ptcd2	65	40.876	Xiphophorus_maculatus