EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000005138 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 9261 bases
Position: chrGeneScaffold_1398:472-9732
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004661	TRM	PF02005.16	7.3e-143	1	1
ENSSARP00000004661	Met_10	PF02475.16	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005144	TRMT1-201	1704	-	ENSSARP00000004661	568 (aa)	-	UPI000157FFA3

Gene Model

Click here to download ENSSARG00000005138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005138	TRMT1	99	84.220	ENSG00000104907	TRMT1	100	85.340	Homo_sapiens
ENSSARG00000005138	TRMT1	99	85.258	ENSAMEG00000012598	TRMT1	84	85.258	Ailuropoda_melanoleuca
ENSSARG00000005138	TRMT1	96	55.437	ENSACIG00000018680	trmt1	86	55.437	Amphilophus_citrinellus
ENSSARG00000005138	TRMT1	95	63.686	ENSAOCG00000006781	trmt1	81	63.686	Amphiprion_ocellaris
ENSSARG00000005138	TRMT1	95	64.022	ENSAPEG00000007712	trmt1	81	64.022	Amphiprion_percula
ENSSARG00000005138	TRMT1	91	67.379	ENSATEG00000001872	trmt1	76	67.379	Anabas_testudineus
ENSSARG00000005138	TRMT1	92	68.130	ENSACAG00000003825	TRMT1	84	68.130	Anolis_carolinensis
ENSSARG00000005138	TRMT1	99	82.092	ENSANAG00000023016	TRMT1	85	84.240	Aotus_nancymaae
ENSSARG00000005138	TRMT1	91	63.689	ENSACLG00000010073	trmt1	83	63.689	Astatotilapia_calliptera
ENSSARG00000005138	TRMT1	94	65.625	ENSAMXG00000012026	trmt1	81	65.625	Astyanax_mexicanus
ENSSARG00000005138	TRMT1	100	84.155	ENSBTAG00000019325	TRMT1	81	84.155	Bos_taurus
ENSSARG00000005138	TRMT1	90	39.808	WBGene00006613	trm-1	93	39.808	Caenorhabditis_elegans
ENSSARG00000005138	TRMT1	99	81.915	ENSCJAG00000004566	TRMT1	86	81.915	Callithrix_jacchus
ENSSARG00000005138	TRMT1	99	85.790	ENSCAFG00000017070	TRMT1	85	86.630	Canis_familiaris
ENSSARG00000005138	TRMT1	99	84.547	ENSCAFG00020005397	TRMT1	82	85.444	Canis_lupus_dingo
ENSSARG00000005138	TRMT1	100	84.183	ENSCHIG00000013569	TRMT1	86	84.183	Capra_hircus
ENSSARG00000005138	TRMT1	95	80.847	ENSTSYG00000003207	TRMT1	83	80.847	Carlito_syrichta
ENSSARG00000005138	TRMT1	84	83.299	ENSCAPG00000003355	TRMT1	88	83.299	Cavia_aperea
ENSSARG00000005138	TRMT1	100	80.986	ENSCPOG00000011754	TRMT1	86	80.986	Cavia_porcellus
ENSSARG00000005138	TRMT1	99	80.214	ENSCCAG00000022263	TRMT1	86	82.739	Cebus_capucinus
ENSSARG00000005138	TRMT1	84	69.053	ENSCATG00000038220	-	84	69.053	Cercocebus_atys
ENSSARG00000005138	TRMT1	100	84.507	ENSCATG00000039850	TRMT1	86	84.507	Cercocebus_atys
ENSSARG00000005138	TRMT1	99	83.951	ENSCLAG00000015295	TRMT1	86	82.478	Chinchilla_lanigera
ENSSARG00000005138	TRMT1	93	83.333	ENSCSAG00000006500	TRMT1	99	83.333	Chlorocebus_sabaeus
ENSSARG00000005138	TRMT1	91	71.068	ENSCPBG00000023866	TRMT1	77	71.068	Chrysemys_picta_bellii
ENSSARG00000005138	TRMT1	93	45.966	ENSCING00000002884	-	93	45.966	Ciona_intestinalis
ENSSARG00000005138	TRMT1	90	46.589	ENSCSAVG00000010927	-	95	46.538	Ciona_savignyi
ENSSARG00000005138	TRMT1	99	66.014	ENSCANG00000040631	TRMT1	84	66.014	Colobus_angolensis_palliatus
ENSSARG00000005138	TRMT1	93	65.094	ENSCANG00000031650	-	80	65.094	Colobus_angolensis_palliatus
ENSSARG00000005138	TRMT1	100	79.577	ENSCGRG00001022594	Trmt1	84	81.239	Cricetulus_griseus_chok1gshd
ENSSARG00000005138	TRMT1	100	79.577	ENSCGRG00000017732	Trmt1	85	80.106	Cricetulus_griseus_crigri
ENSSARG00000005138	TRMT1	91	65.631	ENSCSEG00000001643	trmt1	84	65.631	Cynoglossus_semilaevis
ENSSARG00000005138	TRMT1	91	65.698	ENSCVAG00000011886	trmt1	77	65.698	Cyprinodon_variegatus
ENSSARG00000005138	TRMT1	91	65.326	ENSDARG00000010978	trmt1	77	65.399	Danio_rerio
ENSSARG00000005138	TRMT1	82	55.532	ENSDNOG00000048240	-	79	55.532	Dasypus_novemcinctus
ENSSARG00000005138	TRMT1	99	79.469	ENSDORG00000014298	Trmt1	85	79.469	Dipodomys_ordii
ENSSARG00000005138	TRMT1	90	46.718	FBgn0032430	CG6388	87	46.718	Drosophila_melanogaster
ENSSARG00000005138	TRMT1	91	53.462	ENSEBUG00000003449	trmt1	75	53.462	Eptatretus_burgeri
ENSSARG00000005138	TRMT1	96	84.982	ENSEASG00005004050	TRMT1	85	84.982	Equus_asinus_asinus
ENSSARG00000005138	TRMT1	96	84.982	ENSECAG00000016149	TRMT1	85	84.982	Equus_caballus
ENSSARG00000005138	TRMT1	51	94.872	ENSEEUG00000014102	-	73	94.872	Erinaceus_europaeus
ENSSARG00000005138	TRMT1	98	61.210	ENSELUG00000021659	trmt1	84	61.210	Esox_lucius
ENSSARG00000005138	TRMT1	99	84.832	ENSFCAG00000000483	TRMT1	86	84.832	Felis_catus
ENSSARG00000005138	TRMT1	99	81.560	ENSFDAG00000007386	TRMT1	85	81.560	Fukomys_damarensis
ENSSARG00000005138	TRMT1	94	64.576	ENSFHEG00000012865	trmt1	89	64.576	Fundulus_heteroclitus
ENSSARG00000005138	TRMT1	90	64.971	ENSGMOG00000006564	trmt1	88	65.234	Gadus_morhua
ENSSARG00000005138	TRMT1	91	66.214	ENSGAFG00000011862	trmt1	80	66.408	Gambusia_affinis
ENSSARG00000005138	TRMT1	99	60.106	ENSGACG00000000227	trmt1	90	60.106	Gasterosteus_aculeatus
ENSSARG00000005138	TRMT1	91	70.250	ENSGAGG00000016432	TRMT1	76	70.250	Gopherus_agassizii
ENSSARG00000005138	TRMT1	99	84.397	ENSGGOG00000014007	TRMT1	85	84.397	Gorilla_gorilla
ENSSARG00000005138	TRMT1	90	57.505	ENSHBUG00000008821	trmt1	84	57.505	Haplochromis_burtoni
ENSSARG00000005138	TRMT1	100	80.986	ENSHGLG00000015972	TRMT1	86	80.986	Heterocephalus_glaber_female
ENSSARG00000005138	TRMT1	93	80.151	ENSHGLG00100018112	TRMT1	86	80.151	Heterocephalus_glaber_male
ENSSARG00000005138	TRMT1	96	60.909	ENSHCOG00000009447	trmt1	85	60.909	Hippocampus_comes
ENSSARG00000005138	TRMT1	95	65.146	ENSIPUG00000002899	trmt1	79	65.209	Ictalurus_punctatus
ENSSARG00000005138	TRMT1	100	84.155	ENSSTOG00000012531	TRMT1	86	84.155	Ictidomys_tridecemlineatus
ENSSARG00000005138	TRMT1	99	80.639	ENSJJAG00000017154	Trmt1	85	80.639	Jaculus_jaculus
ENSSARG00000005138	TRMT1	99	61.111	ENSKMAG00000011809	trmt1	89	64.366	Kryptolebias_marmoratus
ENSSARG00000005138	TRMT1	91	65.049	ENSLBEG00000012703	trmt1	76	65.049	Labrus_bergylta
ENSSARG00000005138	TRMT1	90	58.140	ENSLACG00000014585	TRMT1	84	58.140	Latimeria_chalumnae
ENSSARG00000005138	TRMT1	85	66.253	ENSLOCG00000006479	trmt1	84	66.253	Lepisosteus_oculatus
ENSSARG00000005138	TRMT1	100	83.451	ENSLAFG00000014072	TRMT1	87	83.451	Loxodonta_africana
ENSSARG00000005138	TRMT1	100	84.507	ENSMFAG00000033143	TRMT1	86	84.507	Macaca_fascicularis
ENSSARG00000005138	TRMT1	99	83.511	ENSMMUG00000001167	TRMT1	89	83.511	Macaca_mulatta
ENSSARG00000005138	TRMT1	100	84.331	ENSMNEG00000037867	TRMT1	86	84.331	Macaca_nemestrina
ENSSARG00000005138	TRMT1	99	84.127	ENSMLEG00000016142	TRMT1	86	84.127	Mandrillus_leucophaeus
ENSSARG00000005138	TRMT1	91	66.796	ENSMAMG00000004357	trmt1	77	66.796	Mastacembelus_armatus
ENSSARG00000005138	TRMT1	97	60.708	ENSMZEG00005014510	trmt1	85	60.708	Maylandia_zebra
ENSSARG00000005138	TRMT1	100	80.458	ENSMAUG00000011134	Trmt1	85	80.458	Mesocricetus_auratus
ENSSARG00000005138	TRMT1	99	84.547	ENSMICG00000000793	TRMT1	85	84.547	Microcebus_murinus
ENSSARG00000005138	TRMT1	100	81.162	ENSMOCG00000015895	Trmt1	85	81.514	Microtus_ochrogaster
ENSSARG00000005138	TRMT1	95	62.799	ENSMMOG00000011097	trmt1	87	62.799	Mola_mola
ENSSARG00000005138	TRMT1	96	75.092	ENSMODG00000011619	TRMT1	87	75.092	Monodelphis_domestica
ENSSARG00000005138	TRMT1	100	81.514	MGP_CAROLIEiJ_G0031304	Trmt1	100	80.377	Mus_caroli
ENSSARG00000005138	TRMT1	100	81.338	ENSMUSG00000001909	Trmt1	100	80.755	Mus_musculus
ENSSARG00000005138	TRMT1	100	81.162	MGP_SPRETEiJ_G0032422	Trmt1	100	80.377	Mus_spretus
ENSSARG00000005138	TRMT1	100	84.683	ENSMPUG00000004210	TRMT1	81	84.683	Mustela_putorius_furo
ENSSARG00000005138	TRMT1	100	84.331	ENSMLUG00000012809	TRMT1	84	84.331	Myotis_lucifugus
ENSSARG00000005138	TRMT1	97	84.029	ENSNGAG00000022486	Trmt1	83	84.029	Nannospalax_galili
ENSSARG00000005138	TRMT1	77	68.231	ENSNBRG00000024376	trmt1	75	68.231	Neolamprologus_brichardi
ENSSARG00000005138	TRMT1	78	91.176	ENSNLEG00000013019	-	82	91.176	Nomascus_leucogenys
ENSSARG00000005138	TRMT1	95	75.047	ENSMEUG00000013756	TRMT1	90	75.047	Notamacropus_eugenii
ENSSARG00000005138	TRMT1	80	87.252	ENSOPRG00000009471	-	69	87.252	Ochotona_princeps
ENSSARG00000005138	TRMT1	100	82.218	ENSODEG00000010323	TRMT1	86	82.218	Octodon_degus
ENSSARG00000005138	TRMT1	99	63.186	ENSONIG00000000400	trmt1	91	63.186	Oreochromis_niloticus
ENSSARG00000005138	TRMT1	92	83.048	ENSOCUG00000021934	TRMT1	99	83.238	Oryctolagus_cuniculus
ENSSARG00000005138	TRMT1	94	60.037	ENSORLG00000020074	trmt1	85	59.890	Oryzias_latipes
ENSSARG00000005138	TRMT1	94	63.060	ENSORLG00020007561	trmt1	84	62.873	Oryzias_latipes_hni
ENSSARG00000005138	TRMT1	91	65.437	ENSORLG00015006547	trmt1	78	65.437	Oryzias_latipes_hsok
ENSSARG00000005138	TRMT1	91	65.243	ENSOMEG00000019343	trmt1	78	65.243	Oryzias_melastigma
ENSSARG00000005138	TRMT1	96	82.664	ENSOGAG00000025576	TRMT1	86	82.847	Otolemur_garnettii
ENSSARG00000005138	TRMT1	100	69.755	ENSOARG00000009397	TRMT1	80	69.930	Ovis_aries
ENSSARG00000005138	TRMT1	98	77.281	ENSPPRG00000012117	TRMT1	85	77.281	Panthera_pardus
ENSSARG00000005138	TRMT1	73	87.059	ENSPTIG00000008833	TRMT1	79	87.059	Panthera_tigris_altaica
ENSSARG00000005138	TRMT1	99	84.397	ENSPTRG00000010557	TRMT1	85	84.397	Pan_troglodytes
ENSSARG00000005138	TRMT1	95	64.312	ENSPTRG00000050421	-	80	64.312	Pan_troglodytes
ENSSARG00000005138	TRMT1	85	68.660	ENSPANG00000034058	-	84	68.660	Papio_anubis
ENSSARG00000005138	TRMT1	99	84.752	ENSPANG00000009247	TRMT1	85	84.752	Papio_anubis
ENSSARG00000005138	TRMT1	91	65.504	ENSPKIG00000005309	trmt1	76	65.504	Paramormyrops_kingsleyae
ENSSARG00000005138	TRMT1	91	59.690	ENSPSIG00000008762	TRMT1	74	59.690	Pelodiscus_sinensis
ENSSARG00000005138	TRMT1	96	62.615	ENSPMGG00000019764	trmt1	85	62.615	Periophthalmus_magnuspinnatus
ENSSARG00000005138	TRMT1	100	80.986	ENSPEMG00000016247	Trmt1	85	81.514	Peromyscus_maniculatus_bairdii
ENSSARG00000005138	TRMT1	91	59.152	ENSPMAG00000004329	trmt1	81	59.152	Petromyzon_marinus
ENSSARG00000005138	TRMT1	99	73.391	ENSPCIG00000019273	TRMT1	88	73.391	Phascolarctos_cinereus
ENSSARG00000005138	TRMT1	95	64.469	ENSPFOG00000008527	trmt1	84	64.469	Poecilia_formosa
ENSSARG00000005138	TRMT1	95	64.835	ENSPLAG00000018788	trmt1	92	64.835	Poecilia_latipinna
ENSSARG00000005138	TRMT1	91	66.990	ENSPMEG00000013120	trmt1	79	66.990	Poecilia_mexicana
ENSSARG00000005138	TRMT1	91	66.602	ENSPREG00000000211	trmt1	77	66.796	Poecilia_reticulata
ENSSARG00000005138	TRMT1	99	84.752	ENSPPYG00000009622	TRMT1	85	84.752	Pongo_abelii
ENSSARG00000005138	TRMT1	99	76.014	ENSPCAG00000003698	TRMT1	87	76.014	Procavia_capensis
ENSSARG00000005138	TRMT1	99	83.659	ENSPCOG00000008653	TRMT1	85	83.659	Propithecus_coquereli
ENSSARG00000005138	TRMT1	99	84.574	ENSPVAG00000015076	TRMT1	85	84.574	Pteropus_vampyrus
ENSSARG00000005138	TRMT1	91	62.136	ENSPNYG00000013960	trmt1	83	62.136	Pundamilia_nyererei
ENSSARG00000005138	TRMT1	83	69.451	ENSPNAG00000024859	trmt1	78	69.451	Pygocentrus_nattereri
ENSSARG00000005138	TRMT1	96	82.784	ENSRNOG00000002914	Trmt1	85	82.784	Rattus_norvegicus
ENSSARG00000005138	TRMT1	93	64.098	ENSRBIG00000037505	-	81	64.098	Rhinopithecus_bieti
ENSSARG00000005138	TRMT1	100	84.155	ENSRBIG00000038324	TRMT1	86	84.155	Rhinopithecus_bieti
ENSSARG00000005138	TRMT1	93	63.346	ENSRROG00000031847	-	80	63.346	Rhinopithecus_roxellana
ENSSARG00000005138	TRMT1	100	83.979	ENSRROG00000028599	TRMT1	86	83.979	Rhinopithecus_roxellana
ENSSARG00000005138	TRMT1	90	36.245	YDR120C	-	92	36.245	Saccharomyces_cerevisiae
ENSSARG00000005138	TRMT1	99	80.392	ENSSBOG00000028861	TRMT1	86	82.364	Saimiri_boliviensis_boliviensis
ENSSARG00000005138	TRMT1	93	76.083	ENSSHAG00000014381	TRMT1	88	74.955	Sarcophilus_harrisii
ENSSARG00000005138	TRMT1	91	66.796	ENSSFOG00015004139	trmt1	76	66.796	Scleropages_formosus
ENSSARG00000005138	TRMT1	91	66.667	ENSSMAG00000021136	trmt1	77	66.667	Scophthalmus_maximus
ENSSARG00000005138	TRMT1	91	67.184	ENSSDUG00000012740	trmt1	76	67.184	Seriola_dumerili
ENSSARG00000005138	TRMT1	91	66.990	ENSSLDG00000005971	trmt1	76	66.990	Seriola_lalandi_dorsalis
ENSSARG00000005138	TRMT1	96	54.167	ENSSPUG00000001084	TRMT1	92	54.529	Sphenodon_punctatus
ENSSARG00000005138	TRMT1	95	62.546	ENSSPAG00000007153	trmt1	89	62.546	Stegastes_partitus
ENSSARG00000005138	TRMT1	96	86.630	ENSSSCG00000013744	TRMT1	85	86.630	Sus_scrofa
ENSSARG00000005138	TRMT1	91	64.683	ENSTRUG00000010700	trmt1	79	65.259	Takifugu_rubripes
ENSSARG00000005138	TRMT1	91	65.116	ENSTNIG00000018808	trmt1	88	65.116	Tetraodon_nigroviridis
ENSSARG00000005138	TRMT1	99	81.305	ENSTTRG00000006379	TRMT1	86	81.305	Tursiops_truncatus
ENSSARG00000005138	TRMT1	99	85.357	ENSUAMG00000022911	TRMT1	86	86.506	Ursus_americanus
ENSSARG00000005138	TRMT1	96	86.081	ENSUMAG00000006027	TRMT1	85	86.081	Ursus_maritimus
ENSSARG00000005138	TRMT1	99	85.258	ENSVVUG00000024177	TRMT1	85	85.258	Vulpes_vulpes
ENSSARG00000005138	TRMT1	82	68.455	ENSXETG00000033863	TRMT1	92	68.455	Xenopus_tropicalis
ENSSARG00000005138	TRMT1	91	66.214	ENSXCOG00000015733	trmt1	79	66.408	Xiphophorus_couchianus
ENSSARG00000005138	TRMT1	92	65.517	ENSXMAG00000013823	trmt1	89	65.709	Xiphophorus_maculatus