EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000005165 (Gene tree)
Gene ID: -
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 9624 bases
Position: chrGeneScaffold_5754:80836-90459
Accession: 101550504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004675	RRM_1	PF00076.22	8.7e-31	1	2
ENSSARP00000004675	RRM_1	PF00076.22	8.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005158	RBM23-201	1338	XM_004609478	ENSSARP00000004675	445 (aa)	XP_004609535	UPI0001581753

Gene Model

Click here to download ENSSARG00000005165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000005165	RBM23	68	67.085	ENSSARG00000007673	RBM39	59	65.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005165	RBM23	100	88.565	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSSARG00000005165	RBM23	100	86.947	ENSAMEG00000007322	RBM23	100	89.159	Ailuropoda_melanoleuca
ENSSARG00000005165	RBM23	72	80.547	ENSACAG00000001569	RBM23	68	80.923	Anolis_carolinensis
ENSSARG00000005165	RBM23	100	67.937	ENSANAG00000033790	-	72	72.100	Aotus_nancymaae
ENSSARG00000005165	RBM23	100	86.393	ENSBTAG00000038333	RBM23	100	86.393	Bos_taurus
ENSSARG00000005165	RBM23	100	87.668	ENSCJAG00000008482	RBM23	100	85.202	Callithrix_jacchus
ENSSARG00000005165	RBM23	100	81.739	ENSCAFG00000011217	RBM23	100	83.696	Canis_familiaris
ENSSARG00000005165	RBM23	100	88.814	ENSCAFG00020007711	RBM23	100	90.157	Canis_lupus_dingo
ENSSARG00000005165	RBM23	100	86.177	ENSCHIG00000025709	RBM23	100	85.313	Capra_hircus
ENSSARG00000005165	RBM23	100	88.196	ENSTSYG00000014755	RBM23	100	90.942	Carlito_syrichta
ENSSARG00000005165	RBM23	100	72.870	ENSCCAG00000028584	-	100	75.000	Cebus_capucinus
ENSSARG00000005165	RBM23	100	86.996	ENSCCAG00000025114	-	100	86.547	Cebus_capucinus
ENSSARG00000005165	RBM23	100	88.814	ENSCATG00000017832	RBM23	100	90.357	Cercocebus_atys
ENSSARG00000005165	RBM23	100	88.814	ENSCSAG00000016213	RBM23	100	88.814	Chlorocebus_sabaeus
ENSSARG00000005165	RBM23	100	68.834	ENSCPBG00000026096	RBM23	77	80.251	Chrysemys_picta_bellii
ENSSARG00000005165	RBM23	77	90.936	ENSCANG00000001893	RBM23	78	91.536	Colobus_angolensis_palliatus
ENSSARG00000005165	RBM23	100	87.220	ENSDNOG00000032457	RBM23	100	87.220	Dasypus_novemcinctus
ENSSARG00000005165	RBM23	62	91.304	ENSDORG00000004926	-	100	91.304	Dipodomys_ordii
ENSSARG00000005165	RBM23	50	76.667	ENSETEG00000017915	-	87	77.473	Echinops_telfairi
ENSSARG00000005165	RBM23	96	88.426	ENSEASG00005011696	RBM23	95	89.120	Equus_asinus_asinus
ENSSARG00000005165	RBM23	100	80.401	ENSECAG00000009910	RBM23	100	79.646	Equus_caballus
ENSSARG00000005165	RBM23	100	84.564	ENSEEUG00000015560	RBM23	100	85.011	Erinaceus_europaeus
ENSSARG00000005165	RBM23	100	87.025	ENSFCAG00000006632	RBM23	100	90.157	Felis_catus
ENSSARG00000005165	RBM23	100	88.341	ENSGGOG00000015707	RBM23	100	89.462	Gorilla_gorilla
ENSSARG00000005165	RBM23	100	79.372	ENSHGLG00100006114	RBM23	99	80.493	Heterocephalus_glaber_male
ENSSARG00000005165	RBM23	62	88.043	ENSSTOG00000010354	RBM23	100	90.217	Ictidomys_tridecemlineatus
ENSSARG00000005165	RBM23	100	83.370	ENSLAFG00000018567	RBM23	100	82.040	Loxodonta_africana
ENSSARG00000005165	RBM23	100	89.485	ENSMFAG00000037595	RBM23	100	89.485	Macaca_fascicularis
ENSSARG00000005165	RBM23	100	89.262	ENSMMUG00000018381	RBM23	100	88.143	Macaca_mulatta
ENSSARG00000005165	RBM23	100	88.814	ENSMNEG00000042442	RBM23	100	88.814	Macaca_nemestrina
ENSSARG00000005165	RBM23	100	80.401	ENSMLEG00000039954	RBM23	100	77.506	Mandrillus_leucophaeus
ENSSARG00000005165	RBM23	100	88.419	ENSMICG00000006364	RBM23	100	89.532	Microcebus_murinus
ENSSARG00000005165	RBM23	100	84.868	ENSMODG00000024448	RBM23	100	85.965	Monodelphis_domestica
ENSSARG00000005165	RBM23	100	89.013	ENSMPUG00000007151	RBM23	100	88.789	Mustela_putorius_furo
ENSSARG00000005165	RBM23	100	78.475	ENSMLUG00000012923	RBM23	100	80.667	Myotis_lucifugus
ENSSARG00000005165	RBM23	100	90.157	ENSNLEG00000014792	RBM23	100	90.380	Nomascus_leucogenys
ENSSARG00000005165	RBM23	54	94.891	ENSMEUG00000014548	-	60	94.891	Notamacropus_eugenii
ENSSARG00000005165	RBM23	71	89.655	ENSOCUG00000002006	RBM23	100	87.500	Oryctolagus_cuniculus
ENSSARG00000005165	RBM23	99	78.775	ENSOGAG00000014794	RBM23	100	77.468	Otolemur_garnettii
ENSSARG00000005165	RBM23	100	85.529	ENSOARG00000019398	RBM23	100	84.665	Ovis_aries
ENSSARG00000005165	RBM23	100	89.262	ENSPPAG00000037922	RBM23	100	89.485	Pan_paniscus
ENSSARG00000005165	RBM23	100	86.801	ENSPPRG00000023344	RBM23	100	89.933	Panthera_pardus
ENSSARG00000005165	RBM23	71	91.536	ENSPTIG00000007831	RBM23	100	86.353	Panthera_tigris_altaica
ENSSARG00000005165	RBM23	100	89.485	ENSPTRG00000006151	RBM23	100	89.709	Pan_troglodytes
ENSSARG00000005165	RBM23	97	85.517	ENSPANG00000001324	RBM23	100	91.336	Papio_anubis
ENSSARG00000005165	RBM23	100	84.130	ENSPCIG00000027773	RBM23	100	84.130	Phascolarctos_cinereus
ENSSARG00000005165	RBM23	100	84.305	ENSPPYG00000005649	RBM23	100	82.735	Pongo_abelii
ENSSARG00000005165	RBM23	100	66.292	ENSPCAG00000006669	RBM23	74	74.528	Procavia_capensis
ENSSARG00000005165	RBM23	100	88.864	ENSPCOG00000018564	RBM23	100	90.580	Propithecus_coquereli
ENSSARG00000005165	RBM23	100	87.919	ENSPVAG00000013785	RBM23	100	87.696	Pteropus_vampyrus
ENSSARG00000005165	RBM23	100	88.814	ENSRBIG00000039276	RBM23	100	88.814	Rhinopithecus_bieti
ENSSARG00000005165	RBM23	100	88.814	ENSRROG00000044026	RBM23	100	88.814	Rhinopithecus_roxellana
ENSSARG00000005165	RBM23	96	66.200	ENSSBOG00000034977	-	73	71.761	Saimiri_boliviensis_boliviensis
ENSSARG00000005165	RBM23	100	91.290	ENSSBOG00000023037	-	100	82.196	Saimiri_boliviensis_boliviensis
ENSSARG00000005165	RBM23	71	88.365	ENSSHAG00000012932	RBM23	100	81.304	Sarcophilus_harrisii
ENSSARG00000005165	RBM23	72	78.834	ENSSPUG00000000489	RBM23	71	78.704	Sphenodon_punctatus
ENSSARG00000005165	RBM23	100	85.588	ENSSSCG00000026700	RBM23	100	86.031	Sus_scrofa
ENSSARG00000005165	RBM23	100	83.223	ENSTBEG00000011543	RBM23	100	86.093	Tupaia_belangeri
ENSSARG00000005165	RBM23	100	85.523	ENSTTRG00000001500	RBM23	100	86.637	Tursiops_truncatus
ENSSARG00000005165	RBM23	100	89.062	ENSUAMG00000008524	RBM23	100	90.179	Ursus_americanus
ENSSARG00000005165	RBM23	100	89.062	ENSUMAG00000014075	RBM23	100	90.179	Ursus_maritimus
ENSSARG00000005165	RBM23	100	88.591	ENSVVUG00000019815	RBM23	100	90.828	Vulpes_vulpes
ENSSARG00000005165	RBM23	68	74.351	ENSXETG00000022623	rbm23	71	73.041	Xenopus_tropicalis