EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000005178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 6225 bases
Position: chrGeneScaffold_7105:778-7002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004687	RRM_1	PF00076.22	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005171	-	666	-	ENSSARP00000004687	222 (aa)	-	UPI000157FC35

Gene Model

Click here to download ENSSARG00000005178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005178	-	99	49.237	ENSG00000205022	PABPN1L	94	50.763	Homo_sapiens
ENSSARG00000005178	-	50	57.759	ENSACIG00000021400	PABPN1L	63	57.759	Amphilophus_citrinellus
ENSSARG00000005178	-	51	56.818	ENSATEG00000011646	PABPN1L	53	56.818	Anabas_testudineus
ENSSARG00000005178	-	63	52.113	ENSACAG00000013250	PABPN1L	76	52.113	Anolis_carolinensis
ENSSARG00000005178	-	99	49.807	ENSANAG00000038178	PABPN1L	94	49.225	Aotus_nancymaae
ENSSARG00000005178	-	50	57.759	ENSACLG00000025147	PABPN1L	68	43.646	Astatotilapia_calliptera
ENSSARG00000005178	-	63	48.322	ENSAMXG00000010873	PABPN1L	69	47.701	Astyanax_mexicanus
ENSSARG00000005178	-	97	50.628	ENSBTAG00000023752	-	94	50.996	Bos_taurus
ENSSARG00000005178	-	99	50.000	ENSCJAG00000045284	PABPN1L	94	51.172	Callithrix_jacchus
ENSSARG00000005178	-	99	51.394	ENSCHIG00000013987	PABPN1L	93	51.394	Capra_hircus
ENSSARG00000005178	-	95	47.773	ENSCAPG00000007240	PABPN1L	93	48.988	Cavia_aperea
ENSSARG00000005178	-	95	49.372	ENSCPOG00000025951	PABPN1L	88	50.628	Cavia_porcellus
ENSSARG00000005178	-	99	48.837	ENSCCAG00000027631	PABPN1L	94	50.000	Cebus_capucinus
ENSSARG00000005178	-	96	51.837	ENSCATG00000031060	PABPN1L	89	52.653	Cercocebus_atys
ENSSARG00000005178	-	95	50.840	ENSCLAG00000000704	PABPN1L	88	50.840	Chinchilla_lanigera
ENSSARG00000005178	-	96	49.618	ENSCSAG00000002881	PABPN1L	90	50.575	Chlorocebus_sabaeus
ENSSARG00000005178	-	96	50.813	ENSCANG00000039336	PABPN1L	89	51.626	Colobus_angolensis_palliatus
ENSSARG00000005178	-	99	50.965	ENSCGRG00001013211	Pabpn1l	94	50.965	Cricetulus_griseus_chok1gshd
ENSSARG00000005178	-	99	50.965	ENSCGRG00000015868	Pabpn1l	94	50.965	Cricetulus_griseus_crigri
ENSSARG00000005178	-	90	48.908	ENSDNOG00000034677	PABPN1L	92	49.587	Dasypus_novemcinctus
ENSSARG00000005178	-	99	54.118	ENSEASG00005000777	PABPN1L	99	51.880	Equus_asinus_asinus
ENSSARG00000005178	-	99	53.725	ENSECAG00000000378	PABPN1L	96	53.725	Equus_caballus
ENSSARG00000005178	-	95	58.824	ENSEEUG00000004747	PABPN1L	86	58.824	Erinaceus_europaeus
ENSSARG00000005178	-	96	54.251	ENSFCAG00000010465	PABPN1L	94	52.874	Felis_catus
ENSSARG00000005178	-	71	50.303	ENSFALG00000003319	PABPN1L	70	50.303	Ficedula_albicollis
ENSSARG00000005178	-	99	45.353	ENSFDAG00000021067	PABPN1L	94	48.438	Fukomys_damarensis
ENSSARG00000005178	-	56	61.111	ENSGALG00000006242	PABPN1L	72	61.111	Gallus_gallus
ENSSARG00000005178	-	99	49.231	ENSGGOG00000012670	PABPN1L	95	50.769	Gorilla_gorilla
ENSSARG00000005178	-	50	57.759	ENSHBUG00000002388	PABPN1L	58	47.436	Haplochromis_burtoni
ENSSARG00000005178	-	99	49.802	ENSHGLG00000014207	PABPN1L	98	50.593	Heterocephalus_glaber_female
ENSSARG00000005178	-	99	49.802	ENSHGLG00100005230	PABPN1L	98	50.593	Heterocephalus_glaber_male
ENSSARG00000005178	-	92	52.720	ENSSTOG00000020814	PABPN1L	87	53.138	Ictidomys_tridecemlineatus
ENSSARG00000005178	-	95	55.508	ENSJJAG00000006433	Pabpn1l	87	55.508	Jaculus_jaculus
ENSSARG00000005178	-	68	51.429	ENSLAFG00000025902	-	70	51.429	Loxodonta_africana
ENSSARG00000005178	-	96	52.245	ENSMFAG00000002924	PABPN1L	89	53.061	Macaca_fascicularis
ENSSARG00000005178	-	96	52.049	ENSMMUG00000012438	PABPN1L	89	52.869	Macaca_mulatta
ENSSARG00000005178	-	96	52.653	ENSMNEG00000044808	PABPN1L	89	53.469	Macaca_nemestrina
ENSSARG00000005178	-	92	53.191	ENSMLEG00000032667	PABPN1L	85	54.043	Mandrillus_leucophaeus
ENSSARG00000005178	-	50	57.759	ENSMZEG00005002186	PABPN1L	68	43.646	Maylandia_zebra
ENSSARG00000005178	-	92	55.459	ENSMAUG00000014032	Pabpn1l	89	54.468	Mesocricetus_auratus
ENSSARG00000005178	-	99	49.807	ENSMICG00000028179	PABPN1L	94	51.351	Microcebus_murinus
ENSSARG00000005178	-	94	53.617	ENSMOCG00000007955	Pabpn1l	87	53.617	Microtus_ochrogaster
ENSSARG00000005178	-	91	43.860	ENSMODG00000003873	-	84	43.860	Monodelphis_domestica
ENSSARG00000005178	-	97	52.245	MGP_CAROLIEiJ_G0031670	Pabpn1l	90	52.245	Mus_caroli
ENSSARG00000005178	-	97	52.653	ENSMUSG00000069867	Pabpn1l	90	52.653	Mus_musculus
ENSSARG00000005178	-	97	53.061	MGP_PahariEiJ_G0023268	Pabpn1l	90	53.061	Mus_pahari
ENSSARG00000005178	-	96	51.220	MGP_SPRETEiJ_G0032788	Pabpn1l	89	51.220	Mus_spretus
ENSSARG00000005178	-	91	44.444	ENSMLUG00000003228	PABPN1L	81	44.444	Myotis_lucifugus
ENSSARG00000005178	-	92	54.310	ENSNGAG00000023992	Pabpn1l	85	54.310	Nannospalax_galili
ENSSARG00000005178	-	50	57.759	ENSNBRG00000017078	PABPN1L	65	47.436	Neolamprologus_brichardi
ENSSARG00000005178	-	99	54.086	ENSOPRG00000005597	PABPN1L	94	54.086	Ochotona_princeps
ENSSARG00000005178	-	91	51.029	ENSODEG00000004649	PABPN1L	89	51.029	Octodon_degus
ENSSARG00000005178	-	94	48.889	ENSOANG00000013901	PABPN1L	84	49.091	Ornithorhynchus_anatinus
ENSSARG00000005178	-	62	52.143	ENSORLG00000026560	PABPN1L	53	52.143	Oryzias_latipes
ENSSARG00000005178	-	62	52.143	ENSORLG00020015068	PABPN1L	53	52.143	Oryzias_latipes_hni
ENSSARG00000005178	-	62	52.143	ENSORLG00015000397	PABPN1L	53	52.143	Oryzias_latipes_hsok
ENSSARG00000005178	-	96	49.590	ENSOGAG00000000433	PABPN1L	89	50.000	Otolemur_garnettii
ENSSARG00000005178	-	96	49.632	ENSOARG00000013682	PABPN1L	95	49.301	Ovis_aries
ENSSARG00000005178	-	99	47.909	ENSPPAG00000028866	PABPN1L	94	49.237	Pan_paniscus
ENSSARG00000005178	-	96	54.251	ENSPPRG00000015106	PABPN1L	94	52.874	Panthera_pardus
ENSSARG00000005178	-	96	51.724	ENSPTIG00000015606	PABPN1L	95	51.724	Panthera_tigris_altaica
ENSSARG00000005178	-	99	47.909	ENSPTRG00000031120	PABPN1L	94	49.237	Pan_troglodytes
ENSSARG00000005178	-	96	51.837	ENSPANG00000026039	PABPN1L	89	52.653	Papio_anubis
ENSSARG00000005178	-	54	56.693	ENSPMGG00000013927	PABPN1L	71	56.693	Periophthalmus_magnuspinnatus
ENSSARG00000005178	-	99	52.778	ENSPEMG00000016624	Pabpn1l	94	52.778	Peromyscus_maniculatus_bairdii
ENSSARG00000005178	-	96	48.988	ENSPPYG00000007655	PABPN1L	89	50.607	Pongo_abelii
ENSSARG00000005178	-	99	51.351	ENSPCOG00000024077	PABPN1L	94	51.737	Propithecus_coquereli
ENSSARG00000005178	-	99	51.515	ENSPVAG00000002716	PABPN1L	94	51.515	Pteropus_vampyrus
ENSSARG00000005178	-	50	57.759	ENSPNYG00000004803	PABPN1L	68	43.646	Pundamilia_nyererei
ENSSARG00000005178	-	99	51.220	ENSRNOG00000029558	Pabpn1l	91	53.252	Rattus_norvegicus
ENSSARG00000005178	-	99	50.965	ENSRBIG00000030740	PABPN1L	94	53.282	Rhinopithecus_bieti
ENSSARG00000005178	-	96	52.653	ENSRROG00000035483	-	89	53.469	Rhinopithecus_roxellana
ENSSARG00000005178	-	99	50.579	ENSRROG00000032240	-	94	53.668	Rhinopithecus_roxellana
ENSSARG00000005178	-	99	50.000	ENSSBOG00000018410	PABPN1L	94	50.965	Saimiri_boliviensis_boliviensis
ENSSARG00000005178	-	99	43.123	ENSSHAG00000010001	-	94	43.123	Sarcophilus_harrisii
ENSSARG00000005178	-	95	55.603	ENSSSCG00000036367	PABPN1L	94	53.968	Sus_scrofa
ENSSARG00000005178	-	96	54.656	ENSTTRG00000004691	PABPN1L	94	54.789	Tursiops_truncatus
ENSSARG00000005178	-	66	45.294	ENSXETG00000011258	pabpn1l	83	46.154	Xenopus_tropicalis