EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000005186 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Plus strand
Length
65672 bases
Position
chrGeneScaffold_4267:30644-96315
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000004740CPSF73-100_CPF11718.82.5e-3012
ENSSARP00000004740CPSF73-100_CPF11718.82.5e-3022
ENSSARP00000004740Beta-CaspPF10996.82.8e-3411
ENSSARP00000004740Lactamase_BPF00753.273.1e-1311
ENSSARP00000004740RMMBLPF07521.125.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000005233CPSF3-2012055-ENSSARP00000004740684 (aa)-UPI0001581D0D
Gene Model
Click here to download ENSSARG00000005186's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005186's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000005186CPSF310081.433ENSG00000119203CPSF310081.433Homo_sapiens
ENSSARG00000005186CPSF37384.970ENSAPOG00000012241CPSF39084.909Acanthochromis_polyacanthus
ENSSARG00000005186CPSF38983.051ENSAPOG00000022087cpsf38883.051Acanthochromis_polyacanthus
ENSSARG00000005186CPSF310081.579ENSAMEG00000008493CPSF310081.579Ailuropoda_melanoleuca
ENSSARG00000005186CPSF39267.516ENSACIG00000009846cpsf39967.516Amphilophus_citrinellus
ENSSARG00000005186CPSF39269.524ENSACIG00000023663CPSF39969.524Amphilophus_citrinellus
ENSSARG00000005186CPSF38983.051ENSAOCG00000022056cpsf38883.051Amphiprion_ocellaris
ENSSARG00000005186CPSF39084.181ENSAOCG00000010077CPSF38984.181Amphiprion_ocellaris
ENSSARG00000005186CPSF38983.239ENSAPEG00000019526cpsf38883.239Amphiprion_percula
ENSSARG00000005186CPSF39084.181ENSAPEG00000021167CPSF38984.181Amphiprion_percula
ENSSARG00000005186CPSF38883.239ENSATEG00000003959cpsf38883.239Anabas_testudineus
ENSSARG00000005186CPSF38384.024ENSATEG00000014525CPSF38784.024Anabas_testudineus
ENSSARG00000005186CPSF39877.976ENSAPLG00000006941CPSF39877.976Anas_platyrhynchos
ENSSARG00000005186CPSF39374.961ENSACAG00000001759CPSF39974.961Anolis_carolinensis
ENSSARG00000005186CPSF39195.455ENSANAG00000031254CPSF39295.455Aotus_nancymaae
ENSSARG00000005186CPSF39269.683ENSACLG00000018846CPSF39969.683Astatotilapia_calliptera
ENSSARG00000005186CPSF38883.366ENSACLG00000014484cpsf39083.366Astatotilapia_calliptera
ENSSARG00000005186CPSF39085.009ENSAMXG00000004786cpsf39183.074Astyanax_mexicanus
ENSSARG00000005186CPSF310081.725ENSBTAG00000019735CPSF310081.725Bos_taurus
ENSSARG00000005186CPSF36967.593WBGene00013460cpsf-36667.593Caenorhabditis_elegans
ENSSARG00000005186CPSF310080.994ENSCJAG00000006276CPSF310080.994Callithrix_jacchus
ENSSARG00000005186CPSF310081.579ENSCAFG00000003375CPSF39581.579Canis_familiaris
ENSSARG00000005186CPSF39080.129ENSCAFG00020026799CPSF310080.129Canis_lupus_dingo
ENSSARG00000005186CPSF310081.725ENSCHIG00000013973CPSF310081.725Capra_hircus
ENSSARG00000005186CPSF310081.287ENSTSYG00000002967CPSF310081.287Carlito_syrichta
ENSSARG00000005186CPSF39879.910ENSCAPG00000013851CPSF310079.910Cavia_aperea
ENSSARG00000005186CPSF310080.409ENSCPOG00000011299CPSF310080.409Cavia_porcellus
ENSSARG00000005186CPSF310081.140ENSCCAG00000036730CPSF310081.140Cebus_capucinus
ENSSARG00000005186CPSF39194.318ENSCATG00000014770CPSF39294.318Cercocebus_atys
ENSSARG00000005186CPSF310079.971ENSCLAG00000002727CPSF310079.971Chinchilla_lanigera
ENSSARG00000005186CPSF310073.538ENSCSAG00000007125CPSF310073.538Chlorocebus_sabaeus
ENSSARG00000005186CPSF378100.000ENSCHOG00000000180CPSF380100.000Choloepus_hoffmanni
ENSSARG00000005186CPSF39978.592ENSCPBG00000014074CPSF39978.592Chrysemys_picta_bellii
ENSSARG00000005186CPSF39067.358ENSCING00000007214-8867.358Ciona_intestinalis
ENSSARG00000005186CPSF38893.846ENSCANG00000034435CPSF38993.846Colobus_angolensis_palliatus
ENSSARG00000005186CPSF310080.702ENSCGRG00001013134Cpsf310080.702Cricetulus_griseus_chok1gshd
ENSSARG00000005186CPSF310080.702ENSCGRG00000018319Cpsf310080.702Cricetulus_griseus_crigri
ENSSARG00000005186CPSF38983.616ENSCSEG00000002021CPSF38983.099Cynoglossus_semilaevis
ENSSARG00000005186CPSF39083.992ENSCVAG00000015067CPSF38983.992Cyprinodon_variegatus
ENSSARG00000005186CPSF39085.122ENSDARG00000027649cpsf39085.122Danio_rerio
ENSSARG00000005186CPSF310080.438ENSDNOG00000008940CPSF39580.438Dasypus_novemcinctus
ENSSARG00000005186CPSF39580.031ENSDORG00000014263Cpsf310080.031Dipodomys_ordii
ENSSARG00000005186CPSF38568.992FBgn0261065Cpsf738667.547Drosophila_melanogaster
ENSSARG00000005186CPSF39571.275ENSETEG00000003893CPSF310071.275Echinops_telfairi
ENSSARG00000005186CPSF37778.868ENSEBUG00000009018cpsf38778.868Eptatretus_burgeri
ENSSARG00000005186CPSF310081.579ENSEASG00005003970CPSF310081.579Equus_asinus_asinus
ENSSARG00000005186CPSF310081.579ENSECAG00000019911CPSF310081.579Equus_caballus
ENSSARG00000005186CPSF310077.339ENSEEUG00000015422CPSF310077.339Erinaceus_europaeus
ENSSARG00000005186CPSF39083.992ENSELUG00000013775cpsf38983.992Esox_lucius
ENSSARG00000005186CPSF310081.725ENSFCAG00000007852CPSF310081.725Felis_catus
ENSSARG00000005186CPSF39577.280ENSFALG00000006572CPSF310077.280Ficedula_albicollis
ENSSARG00000005186CPSF39979.765ENSFDAG00000006317CPSF39979.765Fukomys_damarensis
ENSSARG00000005186CPSF38982.298ENSFHEG00000014774cpsf38982.453Fundulus_heteroclitus
ENSSARG00000005186CPSF38983.083ENSGMOG00000003157cpsf38983.083Gadus_morhua
ENSSARG00000005186CPSF39978.267ENSGALG00000016424CPSF39978.267Gallus_gallus
ENSSARG00000005186CPSF38279.332ENSGAFG00000019449cpsf38979.332Gambusia_affinis
ENSSARG00000005186CPSF38984.181ENSGAFG00000008016CPSF38984.181Gambusia_affinis
ENSSARG00000005186CPSF36881.585ENSGAGG00000025583CPSF39381.585Gopherus_agassizii
ENSSARG00000005186CPSF391100.000ENSGGOG00000001757CPSF389100.000Gorilla_gorilla
ENSSARG00000005186CPSF39083.302ENSHBUG00000001188cpsf39083.302Haplochromis_burtoni
ENSSARG00000005186CPSF310079.386ENSHGLG00000000666CPSF39979.386Heterocephalus_glaber_female
ENSSARG00000005186CPSF310079.386ENSHGLG00100007765CPSF39979.386Heterocephalus_glaber_male
ENSSARG00000005186CPSF39082.552ENSHCOG00000007251cpsf38982.552Hippocampus_comes
ENSSARG00000005186CPSF39083.427ENSHCOG00000015957CPSF38883.427Hippocampus_comes
ENSSARG00000005186CPSF39083.208ENSIPUG00000023488cpsf38983.208Ictalurus_punctatus
ENSSARG00000005186CPSF310080.994ENSSTOG00000004476CPSF310080.994Ictidomys_tridecemlineatus
ENSSARG00000005186CPSF310080.117ENSJJAG00000023415Cpsf310080.117Jaculus_jaculus
ENSSARG00000005186CPSF39083.992ENSKMAG00000007317CPSF38983.992Kryptolebias_marmoratus
ENSSARG00000005186CPSF38982.298ENSKMAG00000002806cpsf38882.298Kryptolebias_marmoratus
ENSSARG00000005186CPSF37878.531ENSLBEG00000020569cpsf37778.531Labrus_bergylta
ENSSARG00000005186CPSF38583.992ENSLBEG00000013492CPSF38883.992Labrus_bergylta
ENSSARG00000005186CPSF39968.189ENSLACG00000008308CPSF39868.189Latimeria_chalumnae
ENSSARG00000005186CPSF39973.862ENSLOCG00000016823cpsf39873.862Lepisosteus_oculatus
ENSSARG00000005186CPSF39979.853ENSLAFG00000009467CPSF310079.853Loxodonta_africana
ENSSARG00000005186CPSF310081.287ENSMFAG00000001339CPSF310081.287Macaca_fascicularis
ENSSARG00000005186CPSF39580.216ENSMMUG00000018038CPSF310080.216Macaca_mulatta
ENSSARG00000005186CPSF310068.567ENSMNEG00000039447CPSF310068.567Macaca_nemestrina
ENSSARG00000005186CPSF310081.433ENSMLEG00000026825CPSF310081.433Mandrillus_leucophaeus
ENSSARG00000005186CPSF38280.665ENSMAMG00000008835CPSF38980.665Mastacembelus_armatus
ENSSARG00000005186CPSF38982.830ENSMAMG00000003076cpsf38882.830Mastacembelus_armatus
ENSSARG00000005186CPSF39084.369ENSMZEG00005006258CPSF38984.369Maylandia_zebra
ENSSARG00000005186CPSF39083.302ENSMZEG00005014358cpsf39083.302Maylandia_zebra
ENSSARG00000005186CPSF39877.961ENSMGAG00000013995CPSF310077.961Meleagris_gallopavo
ENSSARG00000005186CPSF35580.053ENSMAUG00000000166Cpsf310080.053Mesocricetus_auratus
ENSSARG00000005186CPSF39195.455ENSMICG00000002363CPSF39395.455Microcebus_murinus
ENSSARG00000005186CPSF310076.462ENSMOCG00000020067Cpsf310076.462Microtus_ochrogaster
ENSSARG00000005186CPSF38181.579ENSMMOG00000018212CPSF38781.579Mola_mola
ENSSARG00000005186CPSF36283.333ENSMMOG00000011923CPSF38870.000Mola_mola
ENSSARG00000005186CPSF39188.390ENSMODG00000014703CPSF39088.390Monodelphis_domestica
ENSSARG00000005186CPSF38380.612ENSMALG00000011474CPSF38980.612Monopterus_albus
ENSSARG00000005186CPSF38983.647ENSMALG00000016416cpsf38983.647Monopterus_albus
ENSSARG00000005186CPSF310080.702MGP_CAROLIEiJ_G0017640Cpsf310080.702Mus_caroli
ENSSARG00000005186CPSF310080.702ENSMUSG00000054309Cpsf310080.702Mus_musculus
ENSSARG00000005186CPSF310080.702MGP_PahariEiJ_G0029397Cpsf310080.702Mus_pahari
ENSSARG00000005186CPSF310080.702MGP_SPRETEiJ_G0018481Cpsf310080.702Mus_spretus
ENSSARG00000005186CPSF310080.994ENSMPUG00000013213CPSF310080.994Mustela_putorius_furo
ENSSARG00000005186CPSF39193.182ENSMLUG00000010636CPSF39193.182Myotis_lucifugus
ENSSARG00000005186CPSF310080.702ENSNGAG00000019836Cpsf310080.702Nannospalax_galili
ENSSARG00000005186CPSF39082.927ENSNBRG00000004770cpsf39082.927Neolamprologus_brichardi
ENSSARG00000005186CPSF39269.683ENSNBRG00000010525CPSF39969.683Neolamprologus_brichardi
ENSSARG00000005186CPSF391100.000ENSNLEG00000013359CPSF389100.000Nomascus_leucogenys
ENSSARG00000005186CPSF310065.936ENSMEUG00000013117-10065.936Notamacropus_eugenii
ENSSARG00000005186CPSF310071.930ENSOPRG00000008902CPSF310071.930Ochotona_princeps
ENSSARG00000005186CPSF310079.532ENSODEG00000003129CPSF310079.532Octodon_degus
ENSSARG00000005186CPSF39083.114ENSONIG00000018812cpsf39083.114Oreochromis_niloticus
ENSSARG00000005186CPSF37584.540ENSOANG00000008577CPSF39184.540Ornithorhynchus_anatinus
ENSSARG00000005186CPSF310081.579ENSOCUG00000003728CPSF310081.579Oryctolagus_cuniculus
ENSSARG00000005186CPSF38981.989ENSORLG00000018854cpsf38881.989Oryzias_latipes
ENSSARG00000005186CPSF38981.989ENSORLG00020013331cpsf38881.989Oryzias_latipes_hni
ENSSARG00000005186CPSF38981.989ENSORLG00015011017cpsf38881.989Oryzias_latipes_hsok
ENSSARG00000005186CPSF38982.364ENSOMEG00000010647cpsf38482.364Oryzias_melastigma
ENSSARG00000005186CPSF39178.669ENSOGAG00000001680CPSF39278.669Otolemur_garnettii
ENSSARG00000005186CPSF310081.725ENSOARG00000015073CPSF310081.725Ovis_aries
ENSSARG00000005186CPSF310081.433ENSPPAG00000042457CPSF310081.433Pan_paniscus
ENSSARG00000005186CPSF310081.433ENSPPRG00000016790CPSF310081.433Panthera_pardus
ENSSARG00000005186CPSF39981.324ENSPTIG00000003920CPSF39981.324Panthera_tigris_altaica
ENSSARG00000005186CPSF310081.433ENSPTRG00000011638CPSF310081.433Pan_troglodytes
ENSSARG00000005186CPSF310081.140ENSPANG00000016798CPSF310081.140Papio_anubis
ENSSARG00000005186CPSF38984.586ENSPKIG00000023646cpsf38984.586Paramormyrops_kingsleyae
ENSSARG00000005186CPSF39976.720ENSPSIG00000016144CPSF310076.720Pelodiscus_sinensis
ENSSARG00000005186CPSF37079.749ENSPMGG00000006141-8379.749Periophthalmus_magnuspinnatus
ENSSARG00000005186CPSF35090.625ENSPMGG00000015311CPSF38590.625Periophthalmus_magnuspinnatus
ENSSARG00000005186CPSF310080.263ENSPEMG00000017668Cpsf310080.263Peromyscus_maniculatus_bairdii
ENSSARG00000005186CPSF37879.851ENSPMAG00000004841cpsf39979.851Petromyzon_marinus
ENSSARG00000005186CPSF39880.060ENSPCIG00000009823CPSF39880.060Phascolarctos_cinereus
ENSSARG00000005186CPSF39082.331ENSPFOG00000015922cpsf38982.331Poecilia_formosa
ENSSARG00000005186CPSF38984.181ENSPFOG00000010418-8984.181Poecilia_formosa
ENSSARG00000005186CPSF39082.331ENSPLAG00000000882cpsf38982.331Poecilia_latipinna
ENSSARG00000005186CPSF39082.519ENSPMEG00000018309cpsf38982.519Poecilia_mexicana
ENSSARG00000005186CPSF38279.332ENSPREG00000014875cpsf38979.332Poecilia_reticulata
ENSSARG00000005186CPSF39084.181ENSPREG00000004482CPSF39484.181Poecilia_reticulata
ENSSARG00000005186CPSF310076.901ENSPPYG00000012666CPSF310076.901Pongo_abelii
ENSSARG00000005186CPSF38689.091ENSPCAG00000015042CPSF39089.091Procavia_capensis
ENSSARG00000005186CPSF37995.455ENSPCOG00000023016CPSF39095.455Propithecus_coquereli
ENSSARG00000005186CPSF39981.232ENSPVAG00000005324CPSF39981.232Pteropus_vampyrus
ENSSARG00000005186CPSF37081.081ENSPNYG00000021047CPSF38081.081Pundamilia_nyererei
ENSSARG00000005186CPSF39083.302ENSPNYG00000004405cpsf39083.302Pundamilia_nyererei
ENSSARG00000005186CPSF39085.009ENSPNAG00000023060cpsf38985.009Pygocentrus_nattereri
ENSSARG00000005186CPSF39980.645ENSRNOG00000052418Cpsf39980.645Rattus_norvegicus
ENSSARG00000005186CPSF310075.439ENSRBIG00000041615CPSF310075.439Rhinopithecus_bieti
ENSSARG00000005186CPSF310081.433ENSRROG00000033792CPSF310081.433Rhinopithecus_roxellana
ENSSARG00000005186CPSF36759.794YLR277CYSH16559.794Saccharomyces_cerevisiae
ENSSARG00000005186CPSF310075.217ENSSBOG00000027263CPSF310075.217Saimiri_boliviensis_boliviensis
ENSSARG00000005186CPSF310080.702ENSSHAG00000007024CPSF310080.702Sarcophilus_harrisii
ENSSARG00000005186CPSF38984.428ENSSFOG00015002108cpsf38984.428Scleropages_formosus
ENSSARG00000005186CPSF37883.647ENSSMAG00000020534CPSF38083.647Scophthalmus_maximus
ENSSARG00000005186CPSF39083.992ENSSDUG00000018498CPSF38983.992Seriola_dumerili
ENSSARG00000005186CPSF39082.895ENSSDUG00000002828cpsf38782.895Seriola_dumerili
ENSSARG00000005186CPSF39082.552ENSSLDG00000008469cpsf38782.552Seriola_lalandi_dorsalis
ENSSARG00000005186CPSF39083.992ENSSLDG00000005234CPSF38983.992Seriola_lalandi_dorsalis
ENSSARG00000005186CPSF39875.559ENSSPUG00000015525CPSF39775.559Sphenodon_punctatus
ENSSARG00000005186CPSF39083.992ENSSPAG00000002906CPSF38983.992Stegastes_partitus
ENSSARG00000005186CPSF38983.239ENSSPAG00000018579cpsf38883.239Stegastes_partitus
ENSSARG00000005186CPSF39981.552ENSSSCG00000020799CPSF39981.552Sus_scrofa
ENSSARG00000005186CPSF39978.267ENSTGUG00000013016CPSF39978.267Taeniopygia_guttata
ENSSARG00000005186CPSF38982.895ENSTRUG00000007030cpsf38291.016Takifugu_rubripes
ENSSARG00000005186CPSF368100.000ENSTBEG00000002707CPSF371100.000Tupaia_belangeri
ENSSARG00000005186CPSF38865.054ENSTTRG00000000861CPSF38865.054Tursiops_truncatus
ENSSARG00000005186CPSF39978.446ENSUAMG00000007535CPSF39878.446Ursus_americanus
ENSSARG00000005186CPSF39580.526ENSUMAG00000003676CPSF310080.526Ursus_maritimus
ENSSARG00000005186CPSF38093.750ENSVPAG00000008041CPSF38793.750Vicugna_pacos
ENSSARG00000005186CPSF310081.579ENSVVUG00000002194CPSF310081.579Vulpes_vulpes
ENSSARG00000005186CPSF39974.743ENSXETG00000008263cpsf39874.743Xenopus_tropicalis
ENSSARG00000005186CPSF39082.519ENSXCOG00000019695cpsf39082.519Xiphophorus_couchianus
ENSSARG00000005186CPSF39082.519ENSXMAG00000009784cpsf38982.519Xiphophorus_maculatus
ENSSARG00000005186CPSF38984.181ENSXMAG00000027291CPSF38984.181Xiphophorus_maculatus

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