EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000005245 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 20643 bases
Position: chrGeneScaffold_7064:4528-25170
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004741	ResIII	PF04851.15	5.2e-08	1	1
ENSSARP00000004741	DEAD	PF00270.29	2.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005234	DDX39B-201	1122	-	ENSSARP00000004741	374 (aa)	-	UPI0001580671

Gene Model

Click here to download ENSSARG00000005245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000005245	DDX39B	94	31.339	ENSSARG00000006017	EIF4A1	85	31.534
ENSSARG00000005245	DDX39B	51	34.872	ENSSARG00000003669	DDX49	68	34.872
ENSSARG00000005245	DDX39B	78	31.034	ENSSARG00000012922	EIF4A2	71	31.271
ENSSARG00000005245	DDX39B	54	33.333	ENSSARG00000007535	DDX47	67	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005245	DDX39B	100	87.701	ENSG00000198563	DDX39B	100	99.160	Homo_sapiens
ENSSARG00000005245	DDX39B	100	87.968	ENSAMEG00000009508	DDX39B	87	87.968	Ailuropoda_melanoleuca
ENSSARG00000005245	DDX39B	100	82.275	ENSACIG00000004534	ddx39b	87	82.275	Amphilophus_citrinellus
ENSSARG00000005245	DDX39B	100	82.275	ENSATEG00000012366	ddx39b	88	82.275	Anabas_testudineus
ENSSARG00000005245	DDX39B	100	85.067	ENSACAG00000012240	DDX39B	87	85.067	Anolis_carolinensis
ENSSARG00000005245	DDX39B	100	87.701	ENSANAG00000030372	DDX39B	87	87.701	Aotus_nancymaae
ENSSARG00000005245	DDX39B	100	80.315	ENSACLG00000018759	ddx39b	87	80.315	Astatotilapia_calliptera
ENSSARG00000005245	DDX39B	100	81.414	ENSAMXG00000017837	ddx39b	88	81.414	Astyanax_mexicanus
ENSSARG00000005245	DDX39B	100	87.433	ENSBTAG00000014490	DDX39B	87	87.433	Bos_taurus
ENSSARG00000005245	DDX39B	100	87.701	ENSCJAG00000003152	DDX39B	87	87.701	Callithrix_jacchus
ENSSARG00000005245	DDX39B	100	87.968	ENSCAFG00000000509	DDX39B	87	87.968	Canis_familiaris
ENSSARG00000005245	DDX39B	100	87.968	ENSCAFG00020020530	DDX39B	87	87.968	Canis_lupus_dingo
ENSSARG00000005245	DDX39B	100	87.433	ENSCHIG00000004579	DDX39B	87	87.433	Capra_hircus
ENSSARG00000005245	DDX39B	100	77.540	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSSARG00000005245	DDX39B	100	87.701	ENSTSYG00000010226	-	87	87.701	Carlito_syrichta
ENSSARG00000005245	DDX39B	100	87.433	ENSCAPG00000010066	DDX39B	87	87.433	Cavia_aperea
ENSSARG00000005245	DDX39B	100	87.433	ENSCPOG00000002335	DDX39B	87	87.433	Cavia_porcellus
ENSSARG00000005245	DDX39B	100	87.701	ENSCCAG00000027897	DDX39B	88	87.701	Cebus_capucinus
ENSSARG00000005245	DDX39B	100	82.086	ENSCATG00000043709	DDX39B	88	82.086	Cercocebus_atys
ENSSARG00000005245	DDX39B	100	87.433	ENSCLAG00000014555	DDX39B	87	87.433	Chinchilla_lanigera
ENSSARG00000005245	DDX39B	100	87.701	ENSCSAG00000008517	DDX39B	88	87.701	Chlorocebus_sabaeus
ENSSARG00000005245	DDX39B	59	79.909	ENSCPBG00000014671	-	80	79.909	Chrysemys_picta_bellii
ENSSARG00000005245	DDX39B	100	87.701	ENSCANG00000041217	DDX39B	77	99.184	Colobus_angolensis_palliatus
ENSSARG00000005245	DDX39B	66	99.184	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSSARG00000005245	DDX39B	59	97.647	ENSCGRG00001021916	-	60	97.647	Cricetulus_griseus_chok1gshd
ENSSARG00000005245	DDX39B	55	98.537	ENSCGRG00000000078	-	90	98.537	Cricetulus_griseus_crigri
ENSSARG00000005245	DDX39B	66	99.184	ENSCGRG00000012479	-	76	99.184	Cricetulus_griseus_crigri
ENSSARG00000005245	DDX39B	100	80.577	ENSDARG00000036069	ddx39b	88	80.840	Danio_rerio
ENSSARG00000005245	DDX39B	100	87.701	ENSDNOG00000010215	DDX39B	87	87.701	Dasypus_novemcinctus
ENSSARG00000005245	DDX39B	100	87.968	ENSDORG00000004985	Ddx39b	100	87.968	Dipodomys_ordii
ENSSARG00000005245	DDX39B	100	98.128	ENSETEG00000009649	DDX39B	87	98.128	Echinops_telfairi
ENSSARG00000005245	DDX39B	100	87.701	ENSEASG00005017156	DDX39B	87	87.701	Equus_asinus_asinus
ENSSARG00000005245	DDX39B	100	87.701	ENSECAG00000007750	DDX39B	88	87.701	Equus_caballus
ENSSARG00000005245	DDX39B	100	80.902	ENSELUG00000017904	ddx39b	87	80.902	Esox_lucius
ENSSARG00000005245	DDX39B	100	87.968	ENSFCAG00000004497	DDX39B	87	87.968	Felis_catus
ENSSARG00000005245	DDX39B	100	87.433	ENSFDAG00000011074	DDX39B	87	87.433	Fukomys_damarensis
ENSSARG00000005245	DDX39B	70	82.824	ENSGAGG00000001300	-	66	82.824	Gopherus_agassizii
ENSSARG00000005245	DDX39B	100	87.701	ENSGGOG00000005989	DDX39B	77	99.184	Gorilla_gorilla
ENSSARG00000005245	DDX39B	55	87.560	ENSHBUG00000022054	-	77	87.560	Haplochromis_burtoni
ENSSARG00000005245	DDX39B	100	86.898	ENSHGLG00000019248	DDX39B	87	86.898	Heterocephalus_glaber_female
ENSSARG00000005245	DDX39B	100	86.898	ENSHGLG00100011850	DDX39B	87	86.898	Heterocephalus_glaber_male
ENSSARG00000005245	DDX39B	100	80.105	ENSIPUG00000015733	DDX39B	83	80.366	Ictalurus_punctatus
ENSSARG00000005245	DDX39B	100	87.166	ENSSTOG00000012838	DDX39B	87	87.166	Ictidomys_tridecemlineatus
ENSSARG00000005245	DDX39B	100	86.898	ENSJJAG00000005660	-	87	86.898	Jaculus_jaculus
ENSSARG00000005245	DDX39B	100	68.984	ENSLBEG00000012254	ddx39b	87	68.717	Labrus_bergylta
ENSSARG00000005245	DDX39B	75	66.312	ENSLBEG00000017177	-	85	74.694	Labrus_bergylta
ENSSARG00000005245	DDX39B	100	76.579	ENSLACG00000002110	DDX39B	88	76.579	Latimeria_chalumnae
ENSSARG00000005245	DDX39B	100	87.701	ENSLAFG00000014202	DDX39B	94	99.184	Loxodonta_africana
ENSSARG00000005245	DDX39B	100	87.701	ENSMFAG00000034233	DDX39B	77	99.184	Macaca_fascicularis
ENSSARG00000005245	DDX39B	100	87.701	ENSMMUG00000008839	DDX39B	77	99.184	Macaca_mulatta
ENSSARG00000005245	DDX39B	100	87.701	ENSMNEG00000041059	DDX39B	77	99.184	Macaca_nemestrina
ENSSARG00000005245	DDX39B	100	87.701	ENSMLEG00000043791	DDX39B	77	99.184	Mandrillus_leucophaeus
ENSSARG00000005245	DDX39B	100	80.315	ENSMZEG00005017654	ddx39b	87	80.315	Maylandia_zebra
ENSSARG00000005245	DDX39B	100	87.701	ENSMAUG00000008059	Ddx39b	87	87.701	Mesocricetus_auratus
ENSSARG00000005245	DDX39B	100	87.701	ENSMICG00000017349	DDX39B	87	87.701	Microcebus_murinus
ENSSARG00000005245	DDX39B	100	87.701	ENSMOCG00000011169	Ddx39b	87	87.701	Microtus_ochrogaster
ENSSARG00000005245	DDX39B	100	87.701	ENSMODG00000015791	DDX39B	88	87.701	Monodelphis_domestica
ENSSARG00000005245	DDX39B	100	87.701	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSSARG00000005245	DDX39B	100	87.701	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSSARG00000005245	DDX39B	100	87.701	MGP_SPRETEiJ_G0022424	Ddx39b	76	99.184	Mus_spretus
ENSSARG00000005245	DDX39B	100	87.968	ENSMPUG00000011407	DDX39B	87	87.968	Mustela_putorius_furo
ENSSARG00000005245	DDX39B	69	82.879	ENSMLUG00000001681	DDX39B	83	82.879	Myotis_lucifugus
ENSSARG00000005245	DDX39B	100	87.701	ENSNGAG00000022948	Ddx39b	87	87.701	Nannospalax_galili
ENSSARG00000005245	DDX39B	100	60.160	ENSNLEG00000006094	DDX39B	85	60.160	Nomascus_leucogenys
ENSSARG00000005245	DDX39B	83	97.222	ENSMEUG00000008264	DDX39B	73	97.222	Notamacropus_eugenii
ENSSARG00000005245	DDX39B	100	87.968	ENSOPRG00000011923	DDX39B	87	87.968	Ochotona_princeps
ENSSARG00000005245	DDX39B	100	87.166	ENSODEG00000018083	DDX39B	87	87.166	Octodon_degus
ENSSARG00000005245	DDX39B	100	81.217	ENSONIG00000004740	ddx39b	88	81.217	Oreochromis_niloticus
ENSSARG00000005245	DDX39B	63	98.312	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSSARG00000005245	DDX39B	100	84.319	ENSOCUG00000024126	DDX39B	88	84.319	Oryctolagus_cuniculus
ENSSARG00000005245	DDX39B	81	76.562	ENSOGAG00000009067	-	84	82.418	Otolemur_garnettii
ENSSARG00000005245	DDX39B	100	86.933	ENSOGAG00000028850	-	87	86.933	Otolemur_garnettii
ENSSARG00000005245	DDX39B	100	87.433	ENSOARG00000008787	DDX39B	86	87.433	Ovis_aries
ENSSARG00000005245	DDX39B	100	87.701	ENSPPAG00000043072	DDX39B	87	87.701	Pan_paniscus
ENSSARG00000005245	DDX39B	100	87.968	ENSPPRG00000001913	DDX39B	87	87.968	Panthera_pardus
ENSSARG00000005245	DDX39B	100	86.898	ENSPTIG00000017669	DDX39B	87	86.898	Panthera_tigris_altaica
ENSSARG00000005245	DDX39B	100	87.701	ENSPTRG00000032509	DDX39B	87	87.701	Pan_troglodytes
ENSSARG00000005245	DDX39B	100	87.701	ENSPANG00000018609	DDX39B	77	99.184	Papio_anubis
ENSSARG00000005245	DDX39B	100	78.851	ENSPKIG00000011324	ddx39b	88	79.634	Paramormyrops_kingsleyae
ENSSARG00000005245	DDX39B	100	87.433	ENSPEMG00000016905	Ddx39b	87	87.433	Peromyscus_maniculatus_bairdii
ENSSARG00000005245	DDX39B	100	87.701	ENSPCIG00000017572	DDX39B	87	87.701	Phascolarctos_cinereus
ENSSARG00000005245	DDX39B	100	87.701	ENSPPYG00000016433	DDX39B	87	87.701	Pongo_abelii
ENSSARG00000005245	DDX39B	61	80.435	ENSPCAG00000003484	DDX39B	81	80.435	Procavia_capensis
ENSSARG00000005245	DDX39B	100	87.701	ENSPCOG00000018656	DDX39B	92	87.701	Propithecus_coquereli
ENSSARG00000005245	DDX39B	100	87.701	ENSPVAG00000004653	DDX39B	87	87.701	Pteropus_vampyrus
ENSSARG00000005245	DDX39B	100	70.370	ENSPNYG00000010382	ddx39b	86	70.370	Pundamilia_nyererei
ENSSARG00000005245	DDX39B	100	80.628	ENSPNAG00000026926	ddx39b	88	80.628	Pygocentrus_nattereri
ENSSARG00000005245	DDX39B	100	87.701	ENSRNOG00000000841	Ddx39b	94	87.701	Rattus_norvegicus
ENSSARG00000005245	DDX39B	100	87.701	ENSRBIG00000031309	DDX39B	77	99.184	Rhinopithecus_bieti
ENSSARG00000005245	DDX39B	100	87.701	ENSRROG00000039517	DDX39B	94	87.701	Rhinopithecus_roxellana
ENSSARG00000005245	DDX39B	100	87.701	ENSSBOG00000035513	-	77	99.184	Saimiri_boliviensis_boliviensis
ENSSARG00000005245	DDX39B	100	87.701	ENSSHAG00000003209	DDX39B	87	87.701	Sarcophilus_harrisii
ENSSARG00000005245	DDX39B	100	79.112	ENSSFOG00015016107	ddx39b	88	79.896	Scleropages_formosus
ENSSARG00000005245	DDX39B	100	82.540	ENSSDUG00000011557	ddx39b	88	82.804	Seriola_dumerili
ENSSARG00000005245	DDX39B	100	82.275	ENSSLDG00000015763	ddx39b	88	82.540	Seriola_lalandi_dorsalis
ENSSARG00000005245	DDX39B	100	85.829	ENSSPUG00000012805	DDX39B	87	85.829	Sphenodon_punctatus
ENSSARG00000005245	DDX39B	100	87.701	ENSSSCG00000001400	DDX39B	83	86.707	Sus_scrofa
ENSSARG00000005245	DDX39B	78	100.000	ENSTBEG00000003721	DDX39B	68	100.000	Tupaia_belangeri
ENSSARG00000005245	DDX39B	100	78.100	ENSTTRG00000014074	DDX39B	88	78.100	Tursiops_truncatus
ENSSARG00000005245	DDX39B	100	80.585	ENSUAMG00000027335	DDX39B	87	80.585	Ursus_americanus
ENSSARG00000005245	DDX39B	100	82.086	ENSUMAG00000015124	DDX39B	94	88.293	Ursus_maritimus
ENSSARG00000005245	DDX39B	70	98.667	ENSVPAG00000009167	-	74	98.667	Vicugna_pacos
ENSSARG00000005245	DDX39B	100	87.968	ENSVVUG00000019518	DDX39B	86	87.968	Vulpes_vulpes
ENSSARG00000005245	DDX39B	100	70.479	ENSXETG00000002498	ddx39b	87	70.479	Xenopus_tropicalis