EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000005275 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 6824 bases
Position: chrscaffold_162246:1322-8145
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004760	LSM	PF01423.22	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005254	-	177	-	ENSSARP00000004760	58 (aa)	-	UPI000157FCC4

Gene Model

Click here to download ENSSARG00000005275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005275	-	100	100.000	ENSG00000170860	LSM3	57	100.000	Homo_sapiens
ENSSARG00000005275	-	100	96.552	ENSAPOG00000018947	lsm3	57	96.552	Acanthochromis_polyacanthus
ENSSARG00000005275	-	100	100.000	ENSAMEG00000009405	LSM3	57	100.000	Ailuropoda_melanoleuca
ENSSARG00000005275	-	100	96.552	ENSAOCG00000007658	lsm3	57	96.552	Amphiprion_ocellaris
ENSSARG00000005275	-	100	96.552	ENSAPEG00000018621	lsm3	57	96.552	Amphiprion_percula
ENSSARG00000005275	-	100	96.552	ENSATEG00000005153	lsm3	57	96.552	Anabas_testudineus
ENSSARG00000005275	-	100	100.000	ENSAPLG00000014499	LSM3	61	100.000	Anas_platyrhynchos
ENSSARG00000005275	-	100	100.000	ENSACAG00000013503	LSM3	57	100.000	Anolis_carolinensis
ENSSARG00000005275	-	100	100.000	ENSANAG00000034627	LSM3	57	100.000	Aotus_nancymaae
ENSSARG00000005275	-	100	96.552	ENSANAG00000002903	-	57	96.552	Aotus_nancymaae
ENSSARG00000005275	-	100	96.552	ENSACLG00000001726	-	56	96.552	Astatotilapia_calliptera
ENSSARG00000005275	-	100	98.276	ENSAMXG00000041214	lsm3	57	98.276	Astyanax_mexicanus
ENSSARG00000005275	-	100	100.000	ENSBTAG00000007363	LSM3	60	100.000	Bos_taurus
ENSSARG00000005275	-	100	68.966	WBGene00003077	lsm-3	57	68.966	Caenorhabditis_elegans
ENSSARG00000005275	-	100	100.000	ENSCAFG00000001760	LSM3	57	100.000	Canis_familiaris
ENSSARG00000005275	-	100	85.714	ENSCAFG00020020950	-	59	85.714	Canis_lupus_dingo
ENSSARG00000005275	-	100	86.207	ENSCAFG00020016680	-	55	86.207	Canis_lupus_dingo
ENSSARG00000005275	-	100	96.552	ENSCAFG00020026452	-	57	96.552	Canis_lupus_dingo
ENSSARG00000005275	-	100	96.552	ENSCAFG00020017266	-	57	96.552	Canis_lupus_dingo
ENSSARG00000005275	-	100	100.000	ENSCAFG00020021584	-	57	100.000	Canis_lupus_dingo
ENSSARG00000005275	-	100	100.000	ENSCHIG00000024650	LSM3	57	100.000	Capra_hircus
ENSSARG00000005275	-	100	100.000	ENSTSYG00000005204	-	57	100.000	Carlito_syrichta
ENSSARG00000005275	-	98	96.491	ENSTSYG00000028528	-	67	96.491	Carlito_syrichta
ENSSARG00000005275	-	100	100.000	ENSCAPG00000015760	LSM3	60	100.000	Cavia_aperea
ENSSARG00000005275	-	100	100.000	ENSCPOG00000034071	LSM3	57	100.000	Cavia_porcellus
ENSSARG00000005275	-	100	100.000	ENSCCAG00000019503	-	57	100.000	Cebus_capucinus
ENSSARG00000005275	-	100	89.655	ENSCCAG00000032763	-	62	89.655	Cebus_capucinus
ENSSARG00000005275	-	100	100.000	ENSCCAG00000036499	-	57	100.000	Cebus_capucinus
ENSSARG00000005275	-	100	100.000	ENSCATG00000039421	LSM3	57	100.000	Cercocebus_atys
ENSSARG00000005275	-	98	73.684	ENSCATG00000031630	-	51	73.684	Cercocebus_atys
ENSSARG00000005275	-	100	100.000	ENSCLAG00000015997	LSM3	57	100.000	Chinchilla_lanigera
ENSSARG00000005275	-	100	96.552	ENSCSAG00000019525	-	57	96.552	Chlorocebus_sabaeus
ENSSARG00000005275	-	100	100.000	ENSCPBG00000014531	LSM3	57	100.000	Chrysemys_picta_bellii
ENSSARG00000005275	-	100	84.483	ENSCSAVG00000009542	-	56	84.483	Ciona_savignyi
ENSSARG00000005275	-	100	96.552	ENSCANG00000018782	-	57	96.552	Colobus_angolensis_palliatus
ENSSARG00000005275	-	100	98.276	ENSCANG00000038037	-	57	98.276	Colobus_angolensis_palliatus
ENSSARG00000005275	-	100	100.000	ENSCANG00000033944	-	57	100.000	Colobus_angolensis_palliatus
ENSSARG00000005275	-	100	100.000	ENSCGRG00001017598	Lsm3	59	100.000	Cricetulus_griseus_chok1gshd
ENSSARG00000005275	-	100	79.310	ENSCGRG00001011396	-	54	79.310	Cricetulus_griseus_chok1gshd
ENSSARG00000005275	-	100	84.746	ENSCGRG00001008639	-	63	84.746	Cricetulus_griseus_chok1gshd
ENSSARG00000005275	-	100	79.310	ENSCGRG00000012129	-	57	79.310	Cricetulus_griseus_crigri
ENSSARG00000005275	-	100	100.000	ENSCGRG00000016159	Lsm3	59	100.000	Cricetulus_griseus_crigri
ENSSARG00000005275	-	100	96.552	ENSCVAG00000006933	lsm3	57	96.552	Cyprinodon_variegatus
ENSSARG00000005275	-	100	98.276	ENSDARG00000089663	lsm3	57	98.276	Danio_rerio
ENSSARG00000005275	-	100	100.000	ENSDNOG00000030808	LSM3	57	100.000	Dasypus_novemcinctus
ENSSARG00000005275	-	100	91.379	ENSDORG00000024490	-	65	91.379	Dipodomys_ordii
ENSSARG00000005275	-	100	100.000	ENSDORG00000006894	-	57	100.000	Dipodomys_ordii
ENSSARG00000005275	-	100	81.034	FBgn0051184	LSm3	56	81.034	Drosophila_melanogaster
ENSSARG00000005275	-	100	100.000	ENSETEG00000016207	LSM3	57	100.000	Echinops_telfairi
ENSSARG00000005275	-	100	94.828	ENSEBUG00000004943	lsm3	57	94.828	Eptatretus_burgeri
ENSSARG00000005275	-	100	100.000	ENSEASG00005015443	LSM3	57	100.000	Equus_asinus_asinus
ENSSARG00000005275	-	100	100.000	ENSECAG00000007803	LSM3	57	100.000	Equus_caballus
ENSSARG00000005275	-	100	98.276	ENSELUG00000018922	lsm3	57	98.276	Esox_lucius
ENSSARG00000005275	-	100	70.690	ENSFCAG00000044344	-	56	70.690	Felis_catus
ENSSARG00000005275	-	100	100.000	ENSFCAG00000038453	LSM3	57	100.000	Felis_catus
ENSSARG00000005275	-	100	100.000	ENSFALG00000012644	LSM3	57	100.000	Ficedula_albicollis
ENSSARG00000005275	-	100	100.000	ENSFDAG00000011470	LSM3	57	100.000	Fukomys_damarensis
ENSSARG00000005275	-	100	96.552	ENSFHEG00000000876	lsm3	57	96.552	Fundulus_heteroclitus
ENSSARG00000005275	-	100	94.828	ENSGMOG00000011024	lsm3	61	94.828	Gadus_morhua
ENSSARG00000005275	-	100	96.552	ENSGAFG00000013965	lsm3	57	96.552	Gambusia_affinis
ENSSARG00000005275	-	100	96.552	ENSGACG00000003488	lsm3	57	96.552	Gasterosteus_aculeatus
ENSSARG00000005275	-	100	100.000	ENSGAGG00000025707	LSM3	57	100.000	Gopherus_agassizii
ENSSARG00000005275	-	100	100.000	ENSGGOG00000010006	LSM3	57	100.000	Gorilla_gorilla
ENSSARG00000005275	-	100	96.552	ENSHBUG00000022399	lsm3	57	96.552	Haplochromis_burtoni
ENSSARG00000005275	-	100	94.828	ENSHGLG00000015564	-	67	94.828	Heterocephalus_glaber_female
ENSSARG00000005275	-	100	100.000	ENSHGLG00000000651	LSM3	57	100.000	Heterocephalus_glaber_female
ENSSARG00000005275	-	100	94.828	ENSHGLG00100010658	-	67	94.828	Heterocephalus_glaber_male
ENSSARG00000005275	-	100	100.000	ENSHGLG00100011343	LSM3	57	100.000	Heterocephalus_glaber_male
ENSSARG00000005275	-	100	96.552	ENSHCOG00000013481	lsm3	57	96.552	Hippocampus_comes
ENSSARG00000005275	-	100	98.276	ENSIPUG00000009207	lsm3	57	98.276	Ictalurus_punctatus
ENSSARG00000005275	-	100	100.000	ENSSTOG00000006842	LSM3	57	100.000	Ictidomys_tridecemlineatus
ENSSARG00000005275	-	100	86.207	ENSJJAG00000012797	-	55	86.207	Jaculus_jaculus
ENSSARG00000005275	-	100	72.414	ENSJJAG00000018311	-	54	72.414	Jaculus_jaculus
ENSSARG00000005275	-	100	100.000	ENSJJAG00000017351	Lsm3	57	100.000	Jaculus_jaculus
ENSSARG00000005275	-	100	96.552	ENSKMAG00000015182	lsm3	57	96.552	Kryptolebias_marmoratus
ENSSARG00000005275	-	100	96.552	ENSLBEG00000021292	lsm3	59	96.552	Labrus_bergylta
ENSSARG00000005275	-	100	98.276	ENSLOCG00000013560	lsm3	57	98.276	Lepisosteus_oculatus
ENSSARG00000005275	-	100	100.000	ENSLAFG00000023308	LSM3	56	100.000	Loxodonta_africana
ENSSARG00000005275	-	100	100.000	ENSMFAG00000003185	LSM3	57	100.000	Macaca_fascicularis
ENSSARG00000005275	-	100	89.655	ENSMMUG00000043596	-	62	89.655	Macaca_mulatta
ENSSARG00000005275	-	100	100.000	ENSMMUG00000023126	LSM3	57	100.000	Macaca_mulatta
ENSSARG00000005275	-	98	75.439	ENSMMUG00000002294	-	51	75.439	Macaca_mulatta
ENSSARG00000005275	-	98	75.439	ENSMNEG00000037686	-	51	75.439	Macaca_nemestrina
ENSSARG00000005275	-	100	100.000	ENSMNEG00000043632	LSM3	57	100.000	Macaca_nemestrina
ENSSARG00000005275	-	100	100.000	ENSMLEG00000036162	LSM3	57	100.000	Mandrillus_leucophaeus
ENSSARG00000005275	-	100	96.552	ENSMAMG00000012807	lsm3	57	96.552	Mastacembelus_armatus
ENSSARG00000005275	-	100	100.000	ENSMGAG00000007776	LSM3	60	100.000	Meleagris_gallopavo
ENSSARG00000005275	-	100	100.000	ENSMICG00000032361	-	57	100.000	Microcebus_murinus
ENSSARG00000005275	-	100	93.103	ENSMICG00000027821	-	62	93.103	Microcebus_murinus
ENSSARG00000005275	-	100	100.000	ENSMOCG00000014269	Lsm3	57	100.000	Microtus_ochrogaster
ENSSARG00000005275	-	100	96.552	ENSMMOG00000020715	lsm3	57	96.552	Mola_mola
ENSSARG00000005275	-	100	100.000	ENSMODG00000007275	LSM3	59	100.000	Monodelphis_domestica
ENSSARG00000005275	-	100	96.552	ENSMALG00000006485	lsm3	57	96.552	Monopterus_albus
ENSSARG00000005275	-	100	100.000	ENSMUSG00000034192	Lsm3	57	100.000	Mus_musculus
ENSSARG00000005275	-	100	100.000	MGP_PahariEiJ_G0022402	Lsm3	57	100.000	Mus_pahari
ENSSARG00000005275	-	100	100.000	MGP_SPRETEiJ_G0029681	Lsm3	57	100.000	Mus_spretus
ENSSARG00000005275	-	95	85.455	ENSMPUG00000019120	-	55	85.455	Mustela_putorius_furo
ENSSARG00000005275	-	100	93.103	ENSMLUG00000024700	-	57	93.103	Myotis_lucifugus
ENSSARG00000005275	-	100	100.000	ENSMLUG00000010677	LSM3	57	100.000	Myotis_lucifugus
ENSSARG00000005275	-	98	77.193	ENSNGAG00000010207	-	53	77.193	Nannospalax_galili
ENSSARG00000005275	-	100	93.103	ENSNGAG00000013716	-	66	93.103	Nannospalax_galili
ENSSARG00000005275	-	100	100.000	ENSNGAG00000022450	Lsm3	57	100.000	Nannospalax_galili
ENSSARG00000005275	-	100	96.552	ENSNBRG00000014318	lsm3	57	96.552	Neolamprologus_brichardi
ENSSARG00000005275	-	100	100.000	ENSNLEG00000005079	LSM3	57	100.000	Nomascus_leucogenys
ENSSARG00000005275	-	100	96.552	ENSNLEG00000030229	-	61	96.552	Nomascus_leucogenys
ENSSARG00000005275	-	100	98.276	ENSODEG00000019740	-	57	98.276	Octodon_degus
ENSSARG00000005275	-	100	98.276	ENSODEG00000019158	-	57	98.276	Octodon_degus
ENSSARG00000005275	-	100	100.000	ENSODEG00000001726	LSM3	57	100.000	Octodon_degus
ENSSARG00000005275	-	100	93.103	ENSODEG00000019403	-	57	93.103	Octodon_degus
ENSSARG00000005275	-	100	96.552	ENSONIG00000000370	lsm3	57	96.552	Oreochromis_niloticus
ENSSARG00000005275	-	100	96.552	ENSONIG00000021369	-	57	96.552	Oreochromis_niloticus
ENSSARG00000005275	-	100	100.000	ENSOANG00000012273	LSM3	57	100.000	Ornithorhynchus_anatinus
ENSSARG00000005275	-	100	100.000	ENSOCUG00000011088	-	57	100.000	Oryctolagus_cuniculus
ENSSARG00000005275	-	100	100.000	ENSOCUG00000027653	-	57	100.000	Oryctolagus_cuniculus
ENSSARG00000005275	-	100	96.552	ENSORLG00000025900	lsm3	57	96.552	Oryzias_latipes
ENSSARG00000005275	-	100	96.552	ENSORLG00020007125	lsm3	57	96.552	Oryzias_latipes_hni
ENSSARG00000005275	-	100	96.552	ENSORLG00015002944	lsm3	57	96.552	Oryzias_latipes_hsok
ENSSARG00000005275	-	100	96.552	ENSOMEG00000001915	lsm3	57	96.552	Oryzias_melastigma
ENSSARG00000005275	-	100	98.276	ENSOGAG00000028858	-	59	98.276	Otolemur_garnettii
ENSSARG00000005275	-	100	100.000	ENSOGAG00000007659	-	57	100.000	Otolemur_garnettii
ENSSARG00000005275	-	100	91.379	ENSOGAG00000033051	-	56	91.379	Otolemur_garnettii
ENSSARG00000005275	-	100	100.000	ENSOARG00000000600	LSM3	56	100.000	Ovis_aries
ENSSARG00000005275	-	100	100.000	ENSPPAG00000034074	LSM3	57	100.000	Pan_paniscus
ENSSARG00000005275	-	100	93.103	ENSPPRG00000010610	-	51	93.103	Panthera_pardus
ENSSARG00000005275	-	100	100.000	ENSPPRG00000012912	-	57	100.000	Panthera_pardus
ENSSARG00000005275	-	100	100.000	ENSPPRG00000020953	-	57	100.000	Panthera_pardus
ENSSARG00000005275	-	100	100.000	ENSPTIG00000003463	-	57	100.000	Panthera_tigris_altaica
ENSSARG00000005275	-	100	100.000	ENSPTIG00000013072	-	57	100.000	Panthera_tigris_altaica
ENSSARG00000005275	-	100	100.000	ENSPTRG00000014650	LSM3	57	100.000	Pan_troglodytes
ENSSARG00000005275	-	100	100.000	ENSPANG00000009378	LSM3	57	100.000	Papio_anubis
ENSSARG00000005275	-	100	87.931	ENSPANG00000032192	-	62	87.931	Papio_anubis
ENSSARG00000005275	-	100	100.000	ENSPKIG00000008037	lsm3	52	100.000	Paramormyrops_kingsleyae
ENSSARG00000005275	-	100	100.000	ENSPSIG00000015720	LSM3	57	100.000	Pelodiscus_sinensis
ENSSARG00000005275	-	100	94.828	ENSPMGG00000012103	lsm3	59	94.828	Periophthalmus_magnuspinnatus
ENSSARG00000005275	-	100	100.000	ENSPEMG00000020213	-	62	100.000	Peromyscus_maniculatus_bairdii
ENSSARG00000005275	-	100	100.000	ENSPEMG00000015797	Lsm3	57	100.000	Peromyscus_maniculatus_bairdii
ENSSARG00000005275	-	100	96.552	ENSPFOG00000008372	lsm3	57	96.552	Poecilia_formosa
ENSSARG00000005275	-	100	96.552	ENSPLAG00000000563	lsm3	57	96.552	Poecilia_latipinna
ENSSARG00000005275	-	100	96.552	ENSPMEG00000022052	lsm3	57	96.552	Poecilia_mexicana
ENSSARG00000005275	-	100	96.552	ENSPREG00000022485	lsm3	57	96.552	Poecilia_reticulata
ENSSARG00000005275	-	100	100.000	ENSPPYG00000013402	LSM3	57	100.000	Pongo_abelii
ENSSARG00000005275	-	100	100.000	ENSPCAG00000017077	LSM3	57	100.000	Procavia_capensis
ENSSARG00000005275	-	100	100.000	ENSPCOG00000016217	-	57	100.000	Propithecus_coquereli
ENSSARG00000005275	-	100	100.000	ENSPVAG00000016795	LSM3	57	100.000	Pteropus_vampyrus
ENSSARG00000005275	-	100	98.276	ENSPNAG00000023467	lsm3	57	98.276	Pygocentrus_nattereri
ENSSARG00000005275	-	100	100.000	ENSRNOG00000008733	Lsm3	57	100.000	Rattus_norvegicus
ENSSARG00000005275	-	100	100.000	ENSRBIG00000034399	LSM3	57	100.000	Rhinopithecus_bieti
ENSSARG00000005275	-	100	74.138	ENSRBIG00000043783	-	51	74.138	Rhinopithecus_bieti
ENSSARG00000005275	-	100	74.138	ENSRROG00000039868	-	51	74.138	Rhinopithecus_roxellana
ENSSARG00000005275	-	100	100.000	ENSRROG00000033276	-	57	100.000	Rhinopithecus_roxellana
ENSSARG00000005275	-	98	96.491	ENSRROG00000044047	-	61	96.491	Rhinopithecus_roxellana
ENSSARG00000005275	-	100	89.655	ENSRROG00000044056	-	62	89.655	Rhinopithecus_roxellana
ENSSARG00000005275	-	100	100.000	ENSSBOG00000024310	LSM3	57	100.000	Saimiri_boliviensis_boliviensis
ENSSARG00000005275	-	100	98.276	ENSSFOG00015007071	lsm3	57	98.276	Scleropages_formosus
ENSSARG00000005275	-	100	96.552	ENSSMAG00000001818	lsm3	57	96.552	Scophthalmus_maximus
ENSSARG00000005275	-	100	96.552	ENSSDUG00000006040	lsm3	57	96.552	Seriola_dumerili
ENSSARG00000005275	-	100	96.552	ENSSLDG00000006399	lsm3	57	96.552	Seriola_lalandi_dorsalis
ENSSARG00000005275	-	100	89.655	ENSSPUG00000005394	LSM3	57	89.655	Sphenodon_punctatus
ENSSARG00000005275	-	100	100.000	ENSSPUG00000017047	-	60	100.000	Sphenodon_punctatus
ENSSARG00000005275	-	100	77.586	ENSSPAG00000000934	lsm3	56	77.586	Stegastes_partitus
ENSSARG00000005275	-	91	71.698	ENSSSCG00000023718	-	54	71.698	Sus_scrofa
ENSSARG00000005275	-	100	100.000	ENSSSCG00000011601	LSM3	57	100.000	Sus_scrofa
ENSSARG00000005275	-	100	100.000	ENSTGUG00000008327	LSM3	57	100.000	Taeniopygia_guttata
ENSSARG00000005275	-	100	96.552	ENSTRUG00000023175	lsm3	57	96.552	Takifugu_rubripes
ENSSARG00000005275	-	100	96.552	ENSTNIG00000005589	lsm3	57	96.552	Tetraodon_nigroviridis
ENSSARG00000005275	-	100	82.759	ENSTBEG00000001050	-	56	82.759	Tupaia_belangeri
ENSSARG00000005275	-	100	100.000	ENSTTRG00000011197	LSM3	57	100.000	Tursiops_truncatus
ENSSARG00000005275	-	100	100.000	ENSUAMG00000017250	-	57	100.000	Ursus_americanus
ENSSARG00000005275	-	100	100.000	ENSUMAG00000015905	LSM3	57	100.000	Ursus_maritimus
ENSSARG00000005275	-	100	100.000	ENSVPAG00000010709	LSM3	61	100.000	Vicugna_pacos
ENSSARG00000005275	-	100	96.552	ENSVVUG00000006481	-	57	96.552	Vulpes_vulpes
ENSSARG00000005275	-	95	92.727	ENSVVUG00000024228	-	56	92.727	Vulpes_vulpes
ENSSARG00000005275	-	100	94.828	ENSVVUG00000029294	-	57	94.828	Vulpes_vulpes
ENSSARG00000005275	-	100	94.828	ENSVVUG00000007332	-	52	94.828	Vulpes_vulpes
ENSSARG00000005275	-	100	93.103	ENSVVUG00000005684	-	57	93.103	Vulpes_vulpes
ENSSARG00000005275	-	100	100.000	ENSXETG00000011534	lsm3	57	100.000	Xenopus_tropicalis
ENSSARG00000005275	-	100	96.552	ENSXCOG00000017432	LSM3	57	96.552	Xiphophorus_couchianus
ENSSARG00000005275	-	100	96.552	ENSXMAG00000009151	lsm3	57	96.552	Xiphophorus_maculatus