EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000005537 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 26646 bases
Position: chrGeneScaffold_4762:5405-32050
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000004993	AD	PF09793.9	7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000005515	LSM12-201	462	-	ENSSARP00000004993	153 (aa)	-	UPI0001580825

Gene Model

Click here to download ENSSARG00000005537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000005537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000005537	LSM12	100	99.346	ENSG00000161654	LSM12	78	99.346	Homo_sapiens
ENSSARG00000005537	LSM12	100	85.621	ENSAPOG00000007907	lsm12b	78	85.621	Acanthochromis_polyacanthus
ENSSARG00000005537	LSM12	100	99.346	ENSAMEG00000018321	LSM12	77	99.346	Ailuropoda_melanoleuca
ENSSARG00000005537	LSM12	100	83.660	ENSACIG00000008538	lsm12b	78	83.660	Amphilophus_citrinellus
ENSSARG00000005537	LSM12	100	84.967	ENSAOCG00000021847	lsm12b	68	84.967	Amphiprion_ocellaris
ENSSARG00000005537	LSM12	100	84.967	ENSAPEG00000002252	lsm12b	78	84.967	Amphiprion_percula
ENSSARG00000005537	LSM12	100	84.314	ENSATEG00000005705	lsm12b	78	84.314	Anabas_testudineus
ENSSARG00000005537	LSM12	100	93.464	ENSACAG00000004618	LSM12	79	93.464	Anolis_carolinensis
ENSSARG00000005537	LSM12	100	99.346	ENSANAG00000029011	LSM12	81	98.198	Aotus_nancymaae
ENSSARG00000005537	LSM12	100	84.314	ENSACLG00000026332	lsm12b	78	84.314	Astatotilapia_calliptera
ENSSARG00000005537	LSM12	100	84.314	ENSAMXG00000032952	lsm12b	78	84.314	Astyanax_mexicanus
ENSSARG00000005537	LSM12	100	80.392	ENSAMXG00000036117	lsm12a	71	80.392	Astyanax_mexicanus
ENSSARG00000005537	LSM12	100	99.346	ENSBTAG00000016252	LSM12	78	99.346	Bos_taurus
ENSSARG00000005537	LSM12	100	99.346	ENSCJAG00000048480	LSM12	81	98.198	Callithrix_jacchus
ENSSARG00000005537	LSM12	100	99.346	ENSCAFG00000014379	LSM12	72	99.346	Canis_familiaris
ENSSARG00000005537	LSM12	100	99.346	ENSCAFG00020012173	LSM12	78	99.346	Canis_lupus_dingo
ENSSARG00000005537	LSM12	100	99.346	ENSCHIG00000018175	LSM12	78	99.346	Capra_hircus
ENSSARG00000005537	LSM12	100	99.346	ENSTSYG00000036361	LSM12	78	99.346	Carlito_syrichta
ENSSARG00000005537	LSM12	100	98.039	ENSCAPG00000009647	LSM12	84	98.039	Cavia_aperea
ENSSARG00000005537	LSM12	100	98.039	ENSCPOG00000012860	LSM12	81	96.396	Cavia_porcellus
ENSSARG00000005537	LSM12	100	99.346	ENSCCAG00000032905	LSM12	81	98.198	Cebus_capucinus
ENSSARG00000005537	LSM12	100	99.346	ENSCATG00000030577	-	81	98.198	Cercocebus_atys
ENSSARG00000005537	LSM12	100	98.039	ENSCLAG00000015759	LSM12	81	96.396	Chinchilla_lanigera
ENSSARG00000005537	LSM12	100	98.693	ENSCSAG00000003486	LSM12	78	98.693	Chlorocebus_sabaeus
ENSSARG00000005537	LSM12	71	99.083	ENSCHOG00000001198	LSM12	100	99.083	Choloepus_hoffmanni
ENSSARG00000005537	LSM12	100	92.157	ENSCPBG00000027105	LSM12	79	92.157	Chrysemys_picta_bellii
ENSSARG00000005537	LSM12	100	99.346	ENSCANG00000043328	LSM12	81	98.198	Colobus_angolensis_palliatus
ENSSARG00000005537	LSM12	100	99.346	ENSCGRG00001002094	Lsm12	81	98.198	Cricetulus_griseus_chok1gshd
ENSSARG00000005537	LSM12	100	99.346	ENSCGRG00000004316	Lsm12	86	99.346	Cricetulus_griseus_crigri
ENSSARG00000005537	LSM12	100	83.660	ENSCSEG00000008434	lsm12b	78	83.660	Cynoglossus_semilaevis
ENSSARG00000005537	LSM12	100	84.314	ENSCVAG00000008755	lsm12b	78	84.314	Cyprinodon_variegatus
ENSSARG00000005537	LSM12	100	85.621	ENSDARG00000109510	lsm12b	78	85.621	Danio_rerio
ENSSARG00000005537	LSM12	100	75.163	ENSDARG00000028848	lsm12a	78	75.163	Danio_rerio
ENSSARG00000005537	LSM12	100	98.693	ENSDNOG00000002418	LSM12	71	98.693	Dasypus_novemcinctus
ENSSARG00000005537	LSM12	100	99.346	ENSDORG00000016381	Lsm12	81	98.198	Dipodomys_ordii
ENSSARG00000005537	LSM12	100	87.582	ENSETEG00000011012	-	87	87.582	Echinops_telfairi
ENSSARG00000005537	LSM12	100	98.693	ENSETEG00000008374	LSM12	78	98.693	Echinops_telfairi
ENSSARG00000005537	LSM12	84	59.375	ENSEBUG00000016299	lsm12a	72	59.375	Eptatretus_burgeri
ENSSARG00000005537	LSM12	100	99.346	ENSEASG00005010155	LSM12	78	99.346	Equus_asinus_asinus
ENSSARG00000005537	LSM12	100	99.346	ENSECAG00000009071	LSM12	81	98.198	Equus_caballus
ENSSARG00000005537	LSM12	100	98.039	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSSARG00000005537	LSM12	100	83.007	ENSELUG00000015538	lsm12b	72	83.007	Esox_lucius
ENSSARG00000005537	LSM12	100	81.046	ENSELUG00000000256	-	78	81.046	Esox_lucius
ENSSARG00000005537	LSM12	100	99.346	ENSFCAG00000037021	LSM12	78	99.346	Felis_catus
ENSSARG00000005537	LSM12	97	98.649	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSSARG00000005537	LSM12	100	83.007	ENSFHEG00000019913	lsm12b	78	83.007	Fundulus_heteroclitus
ENSSARG00000005537	LSM12	100	83.660	ENSGMOG00000015449	lsm12b	97	83.660	Gadus_morhua
ENSSARG00000005537	LSM12	100	93.464	ENSGALG00000039803	LSM12	100	93.464	Gallus_gallus
ENSSARG00000005537	LSM12	100	83.660	ENSGAFG00000011829	lsm12b	78	83.660	Gambusia_affinis
ENSSARG00000005537	LSM12	100	84.314	ENSGACG00000003428	lsm12b	97	84.314	Gasterosteus_aculeatus
ENSSARG00000005537	LSM12	100	93.464	ENSGAGG00000021965	LSM12	79	93.464	Gopherus_agassizii
ENSSARG00000005537	LSM12	100	99.346	ENSGGOG00000010589	-	81	98.198	Gorilla_gorilla
ENSSARG00000005537	LSM12	100	84.314	ENSHBUG00000007667	lsm12b	68	84.314	Haplochromis_burtoni
ENSSARG00000005537	LSM12	100	99.346	ENSHGLG00000011411	LSM12	81	98.198	Heterocephalus_glaber_female
ENSSARG00000005537	LSM12	100	99.346	ENSHGLG00100000241	LSM12	81	99.346	Heterocephalus_glaber_male
ENSSARG00000005537	LSM12	100	83.007	ENSHCOG00000002094	lsm12b	78	83.007	Hippocampus_comes
ENSSARG00000005537	LSM12	100	84.967	ENSIPUG00000014800	lsm12	78	84.967	Ictalurus_punctatus
ENSSARG00000005537	LSM12	99	74.834	ENSIPUG00000008936	lsm12a	77	74.834	Ictalurus_punctatus
ENSSARG00000005537	LSM12	100	99.346	ENSSTOG00000007403	LSM12	81	98.198	Ictidomys_tridecemlineatus
ENSSARG00000005537	LSM12	81	86.290	ENSJJAG00000014652	-	73	86.290	Jaculus_jaculus
ENSSARG00000005537	LSM12	100	98.693	ENSJJAG00000004364	-	81	97.297	Jaculus_jaculus
ENSSARG00000005537	LSM12	100	87.013	ENSJJAG00000011793	-	80	87.013	Jaculus_jaculus
ENSSARG00000005537	LSM12	100	84.967	ENSLBEG00000027999	lsm12b	78	84.967	Labrus_bergylta
ENSSARG00000005537	LSM12	99	90.789	ENSLACG00000015981	LSM12	78	90.789	Latimeria_chalumnae
ENSSARG00000005537	LSM12	100	83.007	ENSLOCG00000013079	lsm12b	78	83.007	Lepisosteus_oculatus
ENSSARG00000005537	LSM12	100	99.346	ENSLAFG00000005202	LSM12	78	99.346	Loxodonta_africana
ENSSARG00000005537	LSM12	100	99.346	ENSMFAG00000031376	LSM12	81	98.198	Macaca_fascicularis
ENSSARG00000005537	LSM12	57	86.207	ENSMMUG00000042106	-	79	86.207	Macaca_mulatta
ENSSARG00000005537	LSM12	57	86.207	ENSMMUG00000038408	-	79	86.207	Macaca_mulatta
ENSSARG00000005537	LSM12	100	99.346	ENSMMUG00000006804	LSM12	81	98.198	Macaca_mulatta
ENSSARG00000005537	LSM12	100	99.346	ENSMNEG00000030594	-	81	98.198	Macaca_nemestrina
ENSSARG00000005537	LSM12	100	99.346	ENSMLEG00000039934	LSM12	81	98.198	Mandrillus_leucophaeus
ENSSARG00000005537	LSM12	100	84.314	ENSMAMG00000004279	lsm12b	78	84.314	Mastacembelus_armatus
ENSSARG00000005537	LSM12	100	84.314	ENSMZEG00005005754	lsm12b	78	84.314	Maylandia_zebra
ENSSARG00000005537	LSM12	100	98.693	ENSMICG00000037219	LSM12	81	97.297	Microcebus_murinus
ENSSARG00000005537	LSM12	100	81.046	ENSMOCG00000017015	-	67	81.046	Microtus_ochrogaster
ENSSARG00000005537	LSM12	100	99.346	ENSMOCG00000019878	-	81	98.198	Microtus_ochrogaster
ENSSARG00000005537	LSM12	100	84.314	ENSMMOG00000020848	lsm12b	78	84.314	Mola_mola
ENSSARG00000005537	LSM12	100	84.967	ENSMALG00000007578	lsm12b	78	84.967	Monopterus_albus
ENSSARG00000005537	LSM12	100	98.693	MGP_CAROLIEiJ_G0017241	Lsm12	81	97.297	Mus_caroli
ENSSARG00000005537	LSM12	100	99.346	ENSMUSG00000020922	Lsm12	81	98.198	Mus_musculus
ENSSARG00000005537	LSM12	100	89.412	MGP_PahariEiJ_G0018371	Lsm12	81	98.198	Mus_pahari
ENSSARG00000005537	LSM12	100	98.693	MGP_SPRETEiJ_G0018084	Lsm12	79	100.000	Mus_spretus
ENSSARG00000005537	LSM12	100	98.693	ENSMLUG00000006391	LSM12	78	98.693	Myotis_lucifugus
ENSSARG00000005537	LSM12	99	73.510	ENSNGAG00000015429	-	77	73.510	Nannospalax_galili
ENSSARG00000005537	LSM12	100	99.346	ENSNGAG00000001870	Lsm12	81	98.198	Nannospalax_galili
ENSSARG00000005537	LSM12	100	84.314	ENSNBRG00000006266	lsm12b	78	84.314	Neolamprologus_brichardi
ENSSARG00000005537	LSM12	100	99.346	ENSNLEG00000005580	-	81	98.198	Nomascus_leucogenys
ENSSARG00000005537	LSM12	80	96.748	ENSMEUG00000007501	-	75	96.748	Notamacropus_eugenii
ENSSARG00000005537	LSM12	100	99.346	ENSOPRG00000008552	LSM12	78	99.346	Ochotona_princeps
ENSSARG00000005537	LSM12	100	98.039	ENSODEG00000017998	-	81	96.396	Octodon_degus
ENSSARG00000005537	LSM12	100	87.582	ENSODEG00000007886	-	59	87.582	Octodon_degus
ENSSARG00000005537	LSM12	100	84.314	ENSONIG00000007933	lsm12b	78	84.314	Oreochromis_niloticus
ENSSARG00000005537	LSM12	53	90.123	ENSOANG00000031724	-	100	90.123	Ornithorhynchus_anatinus
ENSSARG00000005537	LSM12	99	92.105	ENSOCUG00000024823	-	78	92.105	Oryctolagus_cuniculus
ENSSARG00000005537	LSM12	99	93.421	ENSOCUG00000021254	-	78	93.421	Oryctolagus_cuniculus
ENSSARG00000005537	LSM12	100	99.346	ENSOCUG00000008566	-	77	99.346	Oryctolagus_cuniculus
ENSSARG00000005537	LSM12	99	94.079	ENSOCUG00000027889	-	78	94.079	Oryctolagus_cuniculus
ENSSARG00000005537	LSM12	100	84.314	ENSORLG00000011310	lsm12b	78	84.314	Oryzias_latipes
ENSSARG00000005537	LSM12	100	84.314	ENSORLG00020002060	lsm12b	72	84.314	Oryzias_latipes_hni
ENSSARG00000005537	LSM12	100	84.314	ENSORLG00015001647	lsm12b	72	84.314	Oryzias_latipes_hsok
ENSSARG00000005537	LSM12	100	84.314	ENSOMEG00000006184	lsm12b	71	84.314	Oryzias_melastigma
ENSSARG00000005537	LSM12	100	98.693	ENSOGAG00000010489	LSM12	78	98.693	Otolemur_garnettii
ENSSARG00000005537	LSM12	100	99.346	ENSOARG00000006589	LSM12	76	99.346	Ovis_aries
ENSSARG00000005537	LSM12	100	99.346	ENSPPAG00000034974	-	83	99.346	Pan_paniscus
ENSSARG00000005537	LSM12	100	99.346	ENSPPRG00000023420	LSM12	78	99.346	Panthera_pardus
ENSSARG00000005537	LSM12	73	96.396	ENSPTIG00000014850	-	81	96.396	Panthera_tigris_altaica
ENSSARG00000005537	LSM12	100	99.346	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSSARG00000005537	LSM12	100	99.346	ENSPTRG00000009261	LSM12	81	98.198	Pan_troglodytes
ENSSARG00000005537	LSM12	100	99.346	ENSPANG00000021315	-	81	98.198	Papio_anubis
ENSSARG00000005537	LSM12	100	75.817	ENSPKIG00000017932	-	78	75.817	Paramormyrops_kingsleyae
ENSSARG00000005537	LSM12	100	84.967	ENSPKIG00000021058	lsm12b	78	84.967	Paramormyrops_kingsleyae
ENSSARG00000005537	LSM12	100	84.314	ENSPMGG00000021344	lsm12b	78	84.314	Periophthalmus_magnuspinnatus
ENSSARG00000005537	LSM12	100	99.346	ENSPEMG00000012199	Lsm12	81	98.198	Peromyscus_maniculatus_bairdii
ENSSARG00000005537	LSM12	86	65.909	ENSPMAG00000005461	lsm12a	76	65.909	Petromyzon_marinus
ENSSARG00000005537	LSM12	100	95.425	ENSPCIG00000020244	LSM12	78	95.425	Phascolarctos_cinereus
ENSSARG00000005537	LSM12	100	82.353	ENSPFOG00000015930	lsm12b	78	82.353	Poecilia_formosa
ENSSARG00000005537	LSM12	100	82.353	ENSPLAG00000021089	lsm12b	78	82.353	Poecilia_latipinna
ENSSARG00000005537	LSM12	100	82.353	ENSPMEG00000012961	lsm12b	78	82.353	Poecilia_mexicana
ENSSARG00000005537	LSM12	100	83.660	ENSPREG00000010236	lsm12b	85	83.660	Poecilia_reticulata
ENSSARG00000005537	LSM12	100	99.346	ENSPPYG00000008344	LSM12	78	99.346	Pongo_abelii
ENSSARG00000005537	LSM12	80	99.187	ENSPCAG00000008790	LSM12	77	99.187	Procavia_capensis
ENSSARG00000005537	LSM12	100	99.346	ENSPCOG00000027951	LSM12	81	98.198	Propithecus_coquereli
ENSSARG00000005537	LSM12	100	98.693	ENSPVAG00000013706	LSM12	78	98.693	Pteropus_vampyrus
ENSSARG00000005537	LSM12	100	84.314	ENSPNYG00000003386	lsm12b	78	84.314	Pundamilia_nyererei
ENSSARG00000005537	LSM12	100	82.353	ENSPNAG00000004186	lsm12b	78	82.353	Pygocentrus_nattereri
ENSSARG00000005537	LSM12	100	78.431	ENSPNAG00000018435	lsm12a	78	78.431	Pygocentrus_nattereri
ENSSARG00000005537	LSM12	100	99.346	ENSRNOG00000020894	Lsm12	78	99.346	Rattus_norvegicus
ENSSARG00000005537	LSM12	100	99.346	ENSRBIG00000027910	LSM12	81	98.198	Rhinopithecus_bieti
ENSSARG00000005537	LSM12	76	81.897	ENSRROG00000000537	-	80	81.897	Rhinopithecus_roxellana
ENSSARG00000005537	LSM12	100	99.346	ENSRROG00000045530	-	81	98.198	Rhinopithecus_roxellana
ENSSARG00000005537	LSM12	77	32.061	YHR121W	-	68	32.061	Saccharomyces_cerevisiae
ENSSARG00000005537	LSM12	100	99.346	ENSSBOG00000025310	LSM12	81	98.198	Saimiri_boliviensis_boliviensis
ENSSARG00000005537	LSM12	100	95.425	ENSSHAG00000014914	LSM12	97	95.425	Sarcophilus_harrisii
ENSSARG00000005537	LSM12	100	86.275	ENSSFOG00015009612	lsm12	78	86.275	Scleropages_formosus
ENSSARG00000005537	LSM12	100	82.353	ENSSFOG00015020392	lsm12a	78	82.353	Scleropages_formosus
ENSSARG00000005537	LSM12	100	84.967	ENSSMAG00000008089	lsm12b	78	84.967	Scophthalmus_maximus
ENSSARG00000005537	LSM12	100	85.621	ENSSDUG00000012711	lsm12b	78	85.621	Seriola_dumerili
ENSSARG00000005537	LSM12	100	85.621	ENSSLDG00000007404	lsm12b	78	85.621	Seriola_lalandi_dorsalis
ENSSARG00000005537	LSM12	100	94.118	ENSSPUG00000011984	LSM12	79	94.118	Sphenodon_punctatus
ENSSARG00000005537	LSM12	100	84.967	ENSSPAG00000017058	lsm12b	78	84.967	Stegastes_partitus
ENSSARG00000005537	LSM12	100	99.346	ENSSSCG00000032394	LSM12	78	99.346	Sus_scrofa
ENSSARG00000005537	LSM12	100	83.007	ENSTRUG00000007121	lsm12b	78	83.007	Takifugu_rubripes
ENSSARG00000005537	LSM12	100	83.660	ENSTNIG00000014436	lsm12b	78	83.660	Tetraodon_nigroviridis
ENSSARG00000005537	LSM12	100	94.771	ENSTBEG00000012392	-	78	94.771	Tupaia_belangeri
ENSSARG00000005537	LSM12	100	98.693	ENSTBEG00000012523	-	78	98.693	Tupaia_belangeri
ENSSARG00000005537	LSM12	100	99.346	ENSTTRG00000010433	LSM12	78	99.346	Tursiops_truncatus
ENSSARG00000005537	LSM12	100	99.346	ENSUAMG00000006313	LSM12	95	99.346	Ursus_americanus
ENSSARG00000005537	LSM12	100	99.346	ENSUMAG00000012987	LSM12	87	99.346	Ursus_maritimus
ENSSARG00000005537	LSM12	100	92.157	ENSVPAG00000011145	LSM12	78	92.157	Vicugna_pacos
ENSSARG00000005537	LSM12	100	99.346	ENSVVUG00000017581	LSM12	78	99.346	Vulpes_vulpes
ENSSARG00000005537	LSM12	95	65.753	ENSXETG00000003371	lsm12	72	65.753	Xenopus_tropicalis
ENSSARG00000005537	LSM12	100	83.660	ENSXCOG00000003994	lsm12b	78	83.660	Xiphophorus_couchianus
ENSSARG00000005537	LSM12	100	83.660	ENSXMAG00000020950	lsm12b	78	83.660	Xiphophorus_maculatus