EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000006237 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 2935 bases
Position: chrGeneScaffold_1791:22378-25312
Accession: 101544573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000005636	MMR_HSR1	PF01926.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000006217	RAB5B-201	648	-	ENSSARP00000005636	215 (aa)	XP_004601651	UPI000000125D

Gene Model

Click here to download ENSSARG00000006237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000006237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000006237	RAB5B	75	33.537	ENSSARG00000007565	-	81	33.537
ENSSARG00000006237	RAB5B	82	39.344	ENSSARG00000007843	RAB33B	79	39.344
ENSSARG00000006237	RAB5B	90	35.323	ENSSARG00000006891	RAB9B	97	35.323
ENSSARG00000006237	RAB5B	93	34.804	ENSSARG00000006352	RAB9A	99	34.804
ENSSARG00000006237	RAB5B	60	44.961	ENSSARG00000010854	RAB25	100	44.961
ENSSARG00000006237	RAB5B	74	36.250	ENSSARG00000013689	RAB23	67	36.250
ENSSARG00000006237	RAB5B	55	32.500	ENSSARG00000007956	KRAS	82	32.500
ENSSARG00000006237	RAB5B	83	37.705	ENSSARG00000011723	RAB33A	77	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000006237	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSSARG00000006237	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSSARG00000006237	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSSARG00000006237	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSSARG00000006237	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSSARG00000006237	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSSARG00000006237	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSSARG00000006237	RAB5B	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSSARG00000006237	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSSARG00000006237	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSSARG00000006237	RAB5B	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSSARG00000006237	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSSARG00000006237	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSSARG00000006237	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSSARG00000006237	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSSARG00000006237	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSSARG00000006237	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSSARG00000006237	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSSARG00000006237	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSSARG00000006237	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSSARG00000006237	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSSARG00000006237	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSSARG00000006237	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSSARG00000006237	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSSARG00000006237	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSSARG00000006237	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSSARG00000006237	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSSARG00000006237	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSSARG00000006237	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSSARG00000006237	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSSARG00000006237	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSSARG00000006237	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSSARG00000006237	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSSARG00000006237	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSSARG00000006237	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSSARG00000006237	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSSARG00000006237	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSSARG00000006237	RAB5B	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSSARG00000006237	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSSARG00000006237	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSSARG00000006237	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSSARG00000006237	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSSARG00000006237	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSSARG00000006237	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSSARG00000006237	RAB5B	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSSARG00000006237	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSSARG00000006237	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSSARG00000006237	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSSARG00000006237	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSSARG00000006237	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSSARG00000006237	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSSARG00000006237	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSSARG00000006237	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSSARG00000006237	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSSARG00000006237	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes