EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000006573 (Gene tree)
Gene ID
-
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Minus strand
Length
2745 bases
Position
chrscaffold_229595:46313-49057
Accession
101544804
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000005943RNA_ligasePF09414.105e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000006549LIG4-2012745XM_004614053ENSSARP00000005943914 (aa)XP_004614110UPI0001580E8F
Gene Model
Click here to download ENSSARG00000006573's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000006573's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000006573LIG410083.589ENSG00000174405LIG410083.707Homo_sapiens
ENSSARG00000006573LIG49964.136ENSAPOG00000000866lig49964.356Acanthochromis_polyacanthus
ENSSARG00000006573LIG410082.166ENSAMEG00000019685LIG49982.166Ailuropoda_melanoleuca
ENSSARG00000006573LIG49964.317ENSACIG00000018309lig49964.537Amphilophus_citrinellus
ENSSARG00000006573LIG49963.965ENSAOCG00000011768lig49964.184Amphiprion_ocellaris
ENSSARG00000006573LIG49964.074ENSAPEG00000017815lig49964.294Amphiprion_percula
ENSSARG00000006573LIG49964.570ENSATEG00000005583lig49964.790Anabas_testudineus
ENSSARG00000006573LIG49771.977ENSAPLG00000001673LIG49971.977Anas_platyrhynchos
ENSSARG00000006573LIG49972.308ENSACAG00000014566LIG49972.308Anolis_carolinensis
ENSSARG00000006573LIG410082.057ENSANAG00000012446LIG410082.057Aotus_nancymaae
ENSSARG00000006573LIG49963.536ENSACLG00000027051lig49863.536Astatotilapia_calliptera
ENSSARG00000006573LIG49963.089ENSAMXG00000008192lig49463.089Astyanax_mexicanus
ENSSARG00000006573LIG410084.026ENSBTAG00000015868LIG410084.026Bos_taurus
ENSSARG00000006573LIG410081.510ENSCJAG00000014689LIG410081.510Callithrix_jacchus
ENSSARG00000006573LIG410083.370ENSCAFG00000006031LIG410083.370Canis_familiaris
ENSSARG00000006573LIG410083.370ENSCAFG00020021230LIG410083.370Canis_lupus_dingo
ENSSARG00000006573LIG410083.698ENSCHIG00000001019LIG410083.698Capra_hircus
ENSSARG00000006573LIG49981.567ENSCAPG00000006284LIG49981.567Cavia_aperea
ENSSARG00000006573LIG410081.072ENSCPOG00000014266LIG410081.072Cavia_porcellus
ENSSARG00000006573LIG410081.838ENSCCAG00000019971LIG410081.838Cebus_capucinus
ENSSARG00000006573LIG410083.698ENSCATG00000021075LIG410083.698Cercocebus_atys
ENSSARG00000006573LIG410082.057ENSCLAG00000003376LIG410082.057Chinchilla_lanigera
ENSSARG00000006573LIG410083.260ENSCSAG00000000211LIG410083.260Chlorocebus_sabaeus
ENSSARG00000006573LIG49975.358ENSCPBG00000023291LIG410074.729Chrysemys_picta_bellii
ENSSARG00000006573LIG46945.512ENSCING00000009536-9645.512Ciona_intestinalis
ENSSARG00000006573LIG48345.812ENSCSAVG00000010336-9845.812Ciona_savignyi
ENSSARG00000006573LIG410083.370ENSCANG00000005805LIG410083.370Colobus_angolensis_palliatus
ENSSARG00000006573LIG410080.765ENSCGRG00001012072Lig410080.765Cricetulus_griseus_chok1gshd
ENSSARG00000006573LIG410080.765ENSCGRG00000013417Lig410080.765Cricetulus_griseus_crigri
ENSSARG00000006573LIG49764.831ENSCSEG00000013905lig49664.831Cynoglossus_semilaevis
ENSSARG00000006573LIG49964.576ENSCVAG00000007896lig49964.576Cyprinodon_variegatus
ENSSARG00000006573LIG49963.536ENSDARG00000060620lig49863.536Danio_rerio
ENSSARG00000006573LIG410080.765ENSDNOG00000000513LIG410080.765Dasypus_novemcinctus
ENSSARG00000006573LIG410081.619ENSDORG00000027303Lig410081.619Dipodomys_ordii
ENSSARG00000006573LIG49033.103FBgn0030506Lig49233.103Drosophila_melanogaster
ENSSARG00000006573LIG49978.895ENSETEG00000015563LIG410079.006Echinops_telfairi
ENSSARG00000006573LIG49944.269ENSEBUG00000014243lig49844.269Eptatretus_burgeri
ENSSARG00000006573LIG410082.166ENSEASG00005022073LIG410082.166Equus_asinus_asinus
ENSSARG00000006573LIG410081.619ENSECAG00000003257LIG410081.619Equus_caballus
ENSSARG00000006573LIG49964.498ENSELUG00000006787lig49964.609Esox_lucius
ENSSARG00000006573LIG410082.713ENSFCAG00000031985LIG410082.713Felis_catus
ENSSARG00000006573LIG48972.672ENSFALG00000004214LIG49872.672Ficedula_albicollis
ENSSARG00000006573LIG410081.619ENSFDAG00000008973LIG410081.619Fukomys_damarensis
ENSSARG00000006573LIG49964.466ENSFHEG00000007398lig49064.466Fundulus_heteroclitus
ENSSARG00000006573LIG48565.593ENSGMOG00000012843lig49965.593Gadus_morhua
ENSSARG00000006573LIG410070.947ENSGALG00000016854LIG410070.947Gallus_gallus
ENSSARG00000006573LIG49964.373ENSGAFG00000019779lig49564.906Gambusia_affinis
ENSSARG00000006573LIG49963.065ENSGACG00000014135lig49963.175Gasterosteus_aculeatus
ENSSARG00000006573LIG410083.260ENSGGOG00000027771LIG410083.260Gorilla_gorilla
ENSSARG00000006573LIG49963.315ENSHBUG00000006245lig49863.315Haplochromis_burtoni
ENSSARG00000006573LIG410082.385ENSHGLG00000000718LIG410082.385Heterocephalus_glaber_female
ENSSARG00000006573LIG410082.385ENSHGLG00100003265LIG410082.385Heterocephalus_glaber_male
ENSSARG00000006573LIG49963.974ENSHCOG00000012010lig49963.974Hippocampus_comes
ENSSARG00000006573LIG410064.348ENSIPUG00000013748lig410064.348Ictalurus_punctatus
ENSSARG00000006573LIG410083.042ENSSTOG00000024303LIG410083.042Ictidomys_tridecemlineatus
ENSSARG00000006573LIG410081.947ENSJJAG00000006750Lig410081.947Jaculus_jaculus
ENSSARG00000006573LIG49964.686ENSKMAG00000001149lig49964.686Kryptolebias_marmoratus
ENSSARG00000006573LIG49163.604ENSLBEG00000014578lig410063.723Labrus_bergylta
ENSSARG00000006573LIG49970.492ENSLACG00000003282LIG49970.492Latimeria_chalumnae
ENSSARG00000006573LIG49967.881ENSLOCG00000008901lig49767.881Lepisosteus_oculatus
ENSSARG00000006573LIG410080.765ENSLAFG00000031152LIG410080.765Loxodonta_africana
ENSSARG00000006573LIG410083.370ENSMFAG00000037235LIG410083.370Macaca_fascicularis
ENSSARG00000006573LIG410083.370ENSMMUG00000008874LIG410083.370Macaca_mulatta
ENSSARG00000006573LIG410083.370ENSMNEG00000023575LIG410083.370Macaca_nemestrina
ENSSARG00000006573LIG410083.370ENSMLEG00000026720LIG410083.370Mandrillus_leucophaeus
ENSSARG00000006573LIG49963.636ENSMAMG00000008472lig49963.746Mastacembelus_armatus
ENSSARG00000006573LIG49963.646ENSMZEG00005001855lig49863.646Maylandia_zebra
ENSSARG00000006573LIG410071.273ENSMGAG00000015532LIG410071.273Meleagris_gallopavo
ENSSARG00000006573LIG410079.978ENSMOCG00000019000Lig410079.978Microtus_ochrogaster
ENSSARG00000006573LIG49963.586ENSMMOG00000004390lig49963.586Mola_mola
ENSSARG00000006573LIG410077.899ENSMODG00000025064LIG410078.337Monodelphis_domestica
ENSSARG00000006573LIG49963.837ENSMALG00000008555lig49963.837Monopterus_albus
ENSSARG00000006573LIG410080.963MGP_CAROLIEiJ_G0030809Lig410080.963Mus_caroli
ENSSARG00000006573LIG410080.635ENSMUSG00000049717Lig410080.635Mus_musculus
ENSSARG00000006573LIG410080.853MGP_PahariEiJ_G0021270Lig410080.853Mus_pahari
ENSSARG00000006573LIG410080.416MGP_SPRETEiJ_G0031917Lig410080.416Mus_spretus
ENSSARG00000006573LIG410082.166ENSMPUG00000018675LIG410082.166Mustela_putorius_furo
ENSSARG00000006573LIG410083.260ENSMLUG00000001267LIG410083.260Myotis_lucifugus
ENSSARG00000006573LIG410082.713ENSNGAG00000013258Lig410082.713Nannospalax_galili
ENSSARG00000006573LIG49963.048ENSNBRG00000021252lig49963.048Neolamprologus_brichardi
ENSSARG00000006573LIG410082.823ENSNLEG00000007888LIG410082.823Nomascus_leucogenys
ENSSARG00000006573LIG410080.197ENSOPRG00000005765LIG410080.197Ochotona_princeps
ENSSARG00000006573LIG410079.869ENSODEG00000019683LIG410079.869Octodon_degus
ENSSARG00000006573LIG49963.536ENSONIG00000011969lig49763.757Oreochromis_niloticus
ENSSARG00000006573LIG410082.385ENSOCUG00000015734LIG410082.385Oryctolagus_cuniculus
ENSSARG00000006573LIG49964.609ENSORLG00000004041lig49864.609Oryzias_latipes
ENSSARG00000006573LIG49964.939ENSORLG00020019607lig49864.939Oryzias_latipes_hni
ENSSARG00000006573LIG49964.609ENSORLG00015017754lig49864.609Oryzias_latipes_hsok
ENSSARG00000006573LIG47568.613ENSOMEG00000003459lig49968.613Oryzias_melastigma
ENSSARG00000006573LIG410083.388ENSOGAG00000032120LIG49983.388Otolemur_garnettii
ENSSARG00000006573LIG48285.027ENSOARG00000005590LIG49885.027Ovis_aries
ENSSARG00000006573LIG410083.370ENSPPAG00000032998LIG410083.370Pan_paniscus
ENSSARG00000006573LIG410083.370ENSPPRG00000017804LIG410083.370Panthera_pardus
ENSSARG00000006573LIG410083.260ENSPTIG00000010051LIG410083.260Panthera_tigris_altaica
ENSSARG00000006573LIG410083.479ENSPTRG00000006025LIG410083.479Pan_troglodytes
ENSSARG00000006573LIG410083.698ENSPANG00000007562LIG410083.698Papio_anubis
ENSSARG00000006573LIG49966.004ENSPKIG00000011645lig49766.004Paramormyrops_kingsleyae
ENSSARG00000006573LIG49975.000ENSPSIG00000001504LIG49975.000Pelodiscus_sinensis
ENSSARG00000006573LIG49962.942ENSPMGG00000013486lig49962.623Periophthalmus_magnuspinnatus
ENSSARG00000006573LIG410080.656ENSPEMG00000000076Lig410080.656Peromyscus_maniculatus_bairdii
ENSSARG00000006573LIG410077.462ENSPCIG00000021882LIG410077.462Phascolarctos_cinereus
ENSSARG00000006573LIG49964.856ENSPFOG00000000797lig49964.796Poecilia_formosa
ENSSARG00000006573LIG49964.745ENSPLAG00000001196lig49964.686Poecilia_latipinna
ENSSARG00000006573LIG49964.856ENSPMEG00000021353lig49964.796Poecilia_mexicana
ENSSARG00000006573LIG49964.523ENSPREG00000007323lig49964.466Poecilia_reticulata
ENSSARG00000006573LIG410083.260ENSPPYG00000005540LIG410083.260Pongo_abelii
ENSSARG00000006573LIG410082.495ENSPVAG00000016403LIG410082.495Pteropus_vampyrus
ENSSARG00000006573LIG49963.425ENSPNYG00000009660lig49863.425Pundamilia_nyererei
ENSSARG00000006573LIG49963.687ENSPNAG00000028069LIG49963.687Pygocentrus_nattereri
ENSSARG00000006573LIG49963.687ENSPNAG00000028056lig49963.687Pygocentrus_nattereri
ENSSARG00000006573LIG410079.759ENSRNOG00000014605Lig410079.759Rattus_norvegicus
ENSSARG00000006573LIG410081.729ENSRBIG00000039962LIG410081.729Rhinopithecus_bieti
ENSSARG00000006573LIG410082.823ENSRROG00000006040LIG410082.823Rhinopithecus_roxellana
ENSSARG00000006573LIG410081.729ENSSBOG00000019029LIG410081.729Saimiri_boliviensis_boliviensis
ENSSARG00000006573LIG410075.383ENSSHAG00000009525LIG410075.383Sarcophilus_harrisii
ENSSARG00000006573LIG49964.680ENSSFOG00015012835lig49964.680Scleropages_formosus
ENSSARG00000006573LIG49961.716ENSSMAG00000011267lig49961.716Scophthalmus_maximus
ENSSARG00000006573LIG49964.309ENSSDUG00000010343lig49864.309Seriola_dumerili
ENSSARG00000006573LIG49962.693ENSSLDG00000003239lig49962.693Seriola_lalandi_dorsalis
ENSSARG00000006573LIG49373.585ENSSPUG00000002444LIG410073.585Sphenodon_punctatus
ENSSARG00000006573LIG49964.796ENSSPAG00000001609lig49964.796Stegastes_partitus
ENSSARG00000006573LIG410082.823ENSSSCG00000009540LIG410082.823Sus_scrofa
ENSSARG00000006573LIG49971.522ENSTGUG00000010795LIG410071.522Taeniopygia_guttata
ENSSARG00000006573LIG49965.017ENSTRUG00000009984lig49965.017Takifugu_rubripes
ENSSARG00000006573LIG49965.347ENSTNIG00000010348lig49965.567Tetraodon_nigroviridis
ENSSARG00000006573LIG410082.495ENSTBEG00000017741LIG410082.495Tupaia_belangeri
ENSSARG00000006573LIG410082.604ENSTTRG00000012660LIG410082.604Tursiops_truncatus
ENSSARG00000006573LIG410082.713ENSUAMG00000003773LIG410082.713Ursus_americanus
ENSSARG00000006573LIG49968.053ENSXETG00000002654lig49968.053Xenopus_tropicalis
ENSSARG00000006573LIG49964.302ENSXCOG00000017401lig49964.466Xiphophorus_couchianus
ENSSARG00000006573LIG49964.302ENSXMAG00000015142lig49964.466Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us