EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000006816 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 41229 bases
Position: chrGeneScaffold_694:40139-81367
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000006194	Ago_hook	PF10427.9	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000006824	TNRC6C-201	5181	-	ENSSARP00000006194	1726 (aa)	-	UPI0001581362

Gene Model

Click here to download ENSSARG00000006816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000006816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000006816	TNRC6C	60	47.411	ENSSARG00000002479	TNRC6A	64	47.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000006816	TNRC6C	91	88.235	ENSG00000078687	TNRC6C	100	83.158	Homo_sapiens
ENSSARG00000006816	TNRC6C	68	66.667	ENSAPOG00000019749	tnrc6c1	64	66.667	Acanthochromis_polyacanthus
ENSSARG00000006816	TNRC6C	91	94.118	ENSAMEG00000013756	TNRC6C	90	94.118	Ailuropoda_melanoleuca
ENSSARG00000006816	TNRC6C	90	65.546	ENSACIG00000008075	tnrc6c1	80	67.227	Amphilophus_citrinellus
ENSSARG00000006816	TNRC6C	83	69.091	ENSAOCG00000023968	tnrc6c1	63	91.781	Amphiprion_ocellaris
ENSSARG00000006816	TNRC6C	85	63.793	ENSAPEG00000009020	tnrc6c1	65	63.636	Amphiprion_percula
ENSSARG00000006816	TNRC6C	91	90.756	ENSAPLG00000005456	TNRC6C	85	90.756	Anas_platyrhynchos
ENSSARG00000006816	TNRC6C	91	89.916	ENSACAG00000016198	TNRC6C	83	89.916	Anolis_carolinensis
ENSSARG00000006816	TNRC6C	91	89.076	ENSANAG00000021554	TNRC6C	91	89.224	Aotus_nancymaae
ENSSARG00000006816	TNRC6C	90	66.387	ENSACLG00000000424	tnrc6c1	64	68.067	Astatotilapia_calliptera
ENSSARG00000006816	TNRC6C	91	93.277	ENSBTAG00000018658	TNRC6C	91	93.277	Bos_taurus
ENSSARG00000006816	TNRC6C	91	87.395	ENSCJAG00000019431	TNRC6C	91	89.224	Callithrix_jacchus
ENSSARG00000006816	TNRC6C	91	94.118	ENSCAFG00000005224	TNRC6C	91	94.118	Canis_familiaris
ENSSARG00000006816	TNRC6C	91	94.118	ENSCAFG00020006661	TNRC6C	91	94.118	Canis_lupus_dingo
ENSSARG00000006816	TNRC6C	91	91.630	ENSCHIG00000026004	TNRC6C	91	91.810	Capra_hircus
ENSSARG00000006816	TNRC6C	88	89.076	ENSTSYG00000005403	TNRC6C	91	89.076	Carlito_syrichta
ENSSARG00000006816	TNRC6C	91	84.874	ENSCAPG00000007307	TNRC6C	84	84.874	Cavia_aperea
ENSSARG00000006816	TNRC6C	91	88.546	ENSCPOG00000000467	TNRC6C	91	88.793	Cavia_porcellus
ENSSARG00000006816	TNRC6C	91	88.235	ENSCCAG00000030524	TNRC6C	91	89.224	Cebus_capucinus
ENSSARG00000006816	TNRC6C	91	88.235	ENSCATG00000033135	TNRC6C	91	89.655	Cercocebus_atys
ENSSARG00000006816	TNRC6C	91	89.427	ENSCLAG00000011139	TNRC6C	84	89.655	Chinchilla_lanigera
ENSSARG00000006816	TNRC6C	91	88.235	ENSCSAG00000005167	TNRC6C	84	88.235	Chlorocebus_sabaeus
ENSSARG00000006816	TNRC6C	71	88.362	ENSCHOG00000000088	TNRC6C	70	88.362	Choloepus_hoffmanni
ENSSARG00000006816	TNRC6C	91	90.756	ENSCPBG00000027960	TNRC6C	91	90.756	Chrysemys_picta_bellii
ENSSARG00000006816	TNRC6C	91	88.235	ENSCANG00000041771	TNRC6C	91	90.086	Colobus_angolensis_palliatus
ENSSARG00000006816	TNRC6C	91	88.546	ENSCGRG00001022686	Tnrc6c	91	88.793	Cricetulus_griseus_chok1gshd
ENSSARG00000006816	TNRC6C	91	88.546	ENSCGRG00000018041	Tnrc6c	91	88.793	Cricetulus_griseus_crigri
ENSSARG00000006816	TNRC6C	91	60.833	ENSCSEG00000012744	tnrc6c1	62	60.331	Cynoglossus_semilaevis
ENSSARG00000006816	TNRC6C	91	70.833	ENSDARG00000076847	tnrc6c1	71	71.667	Danio_rerio
ENSSARG00000006816	TNRC6C	91	92.437	ENSDNOG00000003247	TNRC6C	86	92.437	Dasypus_novemcinctus
ENSSARG00000006816	TNRC6C	91	89.427	ENSDORG00000004558	Tnrc6c	91	89.655	Dipodomys_ordii
ENSSARG00000006816	TNRC6C	81	88.235	ENSETEG00000005527	TNRC6C	81	88.235	Echinops_telfairi
ENSSARG00000006816	TNRC6C	88	95.798	ENSEASG00005004799	TNRC6C	91	95.798	Equus_asinus_asinus
ENSSARG00000006816	TNRC6C	91	95.798	ENSECAG00000012486	TNRC6C	85	95.798	Equus_caballus
ENSSARG00000006816	TNRC6C	87	93.333	ENSEEUG00000010008	TNRC6C	88	93.333	Erinaceus_europaeus
ENSSARG00000006816	TNRC6C	91	90.756	ENSFCAG00000028358	TNRC6C	91	91.810	Felis_catus
ENSSARG00000006816	TNRC6C	88	90.756	ENSFALG00000000848	TNRC6C	91	90.756	Ficedula_albicollis
ENSSARG00000006816	TNRC6C	91	89.076	ENSFDAG00000010368	TNRC6C	91	89.224	Fukomys_damarensis
ENSSARG00000006816	TNRC6C	86	93.750	ENSFHEG00000002936	tnrc6c1	66	61.832	Fundulus_heteroclitus
ENSSARG00000006816	TNRC6C	91	86.555	ENSGALG00000001725	TNRC6C	91	87.500	Gallus_gallus
ENSSARG00000006816	TNRC6C	91	60.448	ENSGAFG00000019019	tnrc6c1	70	60.448	Gambusia_affinis
ENSSARG00000006816	TNRC6C	91	90.756	ENSGAGG00000022043	TNRC6C	90	90.756	Gopherus_agassizii
ENSSARG00000006816	TNRC6C	91	88.235	ENSGGOG00000011304	TNRC6C	91	90.086	Gorilla_gorilla
ENSSARG00000006816	TNRC6C	90	66.387	ENSHBUG00000010846	tnrc6c1	82	68.067	Haplochromis_burtoni
ENSSARG00000006816	TNRC6C	91	88.106	ENSHGLG00000004809	TNRC6C	84	88.362	Heterocephalus_glaber_female
ENSSARG00000006816	TNRC6C	91	88.106	ENSHGLG00100012597	TNRC6C	84	88.362	Heterocephalus_glaber_male
ENSSARG00000006816	TNRC6C	90	66.406	ENSIPUG00000000818	tnrc6c1	63	67.969	Ictalurus_punctatus
ENSSARG00000006816	TNRC6C	91	88.987	ENSSTOG00000009101	TNRC6C	91	89.224	Ictidomys_tridecemlineatus
ENSSARG00000006816	TNRC6C	91	89.427	ENSJJAG00000017055	Tnrc6c	83	89.655	Jaculus_jaculus
ENSSARG00000006816	TNRC6C	90	67.227	ENSKMAG00000021023	tnrc6c1	62	67.227	Kryptolebias_marmoratus
ENSSARG00000006816	TNRC6C	88	81.513	ENSLACG00000015283	TNRC6C	88	81.513	Latimeria_chalumnae
ENSSARG00000006816	TNRC6C	91	74.167	ENSLOCG00000013377	tnrc6c1	65	74.167	Lepisosteus_oculatus
ENSSARG00000006816	TNRC6C	91	90.756	ENSLAFG00000011122	TNRC6C	90	90.756	Loxodonta_africana
ENSSARG00000006816	TNRC6C	91	88.235	ENSMFAG00000043943	TNRC6C	91	89.655	Macaca_fascicularis
ENSSARG00000006816	TNRC6C	91	88.235	ENSMMUG00000011924	TNRC6C	91	89.655	Macaca_mulatta
ENSSARG00000006816	TNRC6C	91	88.235	ENSMNEG00000030405	TNRC6C	91	89.655	Macaca_nemestrina
ENSSARG00000006816	TNRC6C	91	88.235	ENSMLEG00000033436	TNRC6C	91	89.655	Mandrillus_leucophaeus
ENSSARG00000006816	TNRC6C	76	65.546	ENSMAMG00000023613	tnrc6c1	81	65.546	Mastacembelus_armatus
ENSSARG00000006816	TNRC6C	90	66.387	ENSMZEG00005010920	tnrc6c1	83	61.654	Maylandia_zebra
ENSSARG00000006816	TNRC6C	91	74.640	ENSMGAG00000003906	TNRC6C	85	73.920	Meleagris_gallopavo
ENSSARG00000006816	TNRC6C	88	88.235	ENSMAUG00000021618	Tnrc6c	91	88.362	Mesocricetus_auratus
ENSSARG00000006816	TNRC6C	91	88.235	ENSMICG00000003952	TNRC6C	91	90.086	Microcebus_murinus
ENSSARG00000006816	TNRC6C	91	88.987	ENSMOCG00000015879	Tnrc6c	91	89.224	Microtus_ochrogaster
ENSSARG00000006816	TNRC6C	67	63.525	ENSMMOG00000005203	tnrc6c1	69	63.525	Mola_mola
ENSSARG00000006816	TNRC6C	91	88.235	ENSMODG00000001785	TNRC6C	84	88.235	Monodelphis_domestica
ENSSARG00000006816	TNRC6C	91	89.427	MGP_CAROLIEiJ_G0017465	Tnrc6c	91	89.655	Mus_caroli
ENSSARG00000006816	TNRC6C	91	89.427	ENSMUSG00000025571	Tnrc6c	91	89.655	Mus_musculus
ENSSARG00000006816	TNRC6C	91	89.868	MGP_PahariEiJ_G0018593	Tnrc6c	91	90.086	Mus_pahari
ENSSARG00000006816	TNRC6C	91	89.076	MGP_SPRETEiJ_G0018309	Tnrc6c	91	89.224	Mus_spretus
ENSSARG00000006816	TNRC6C	91	95.798	ENSMPUG00000013348	TNRC6C	83	95.798	Mustela_putorius_furo
ENSSARG00000006816	TNRC6C	91	92.437	ENSMLUG00000014431	TNRC6C	83	92.437	Myotis_lucifugus
ENSSARG00000006816	TNRC6C	91	90.308	ENSNGAG00000012203	Tnrc6c	84	90.517	Nannospalax_galili
ENSSARG00000006816	TNRC6C	90	66.387	ENSNBRG00000005344	tnrc6c1	82	68.067	Neolamprologus_brichardi
ENSSARG00000006816	TNRC6C	89	87.395	ENSNLEG00000000047	TNRC6C	85	87.395	Nomascus_leucogenys
ENSSARG00000006816	TNRC6C	88	81.579	ENSMEUG00000005104	TNRC6C	91	81.579	Notamacropus_eugenii
ENSSARG00000006816	TNRC6C	88	88.987	ENSODEG00000012499	TNRC6C	91	89.224	Octodon_degus
ENSSARG00000006816	TNRC6C	82	60.169	ENSONIG00000002210	tnrc6c1	83	61.345	Oreochromis_niloticus
ENSSARG00000006816	TNRC6C	91	86.555	ENSOANG00000009758	-	57	86.555	Ornithorhynchus_anatinus
ENSSARG00000006816	TNRC6C	78	87.273	ENSOCUG00000006122	TNRC6C	81	87.425	Oryctolagus_cuniculus
ENSSARG00000006816	TNRC6C	91	62.140	ENSORLG00000009837	tnrc6c1	70	64.912	Oryzias_latipes
ENSSARG00000006816	TNRC6C	91	60.902	ENSORLG00020016510	tnrc6c1	69	62.140	Oryzias_latipes_hni
ENSSARG00000006816	TNRC6C	76	56.522	ENSORLG00015000171	tnrc6c1	65	56.522	Oryzias_latipes_hsok
ENSSARG00000006816	TNRC6C	91	61.728	ENSOMEG00000000357	tnrc6c1	66	61.728	Oryzias_melastigma
ENSSARG00000006816	TNRC6C	88	88.235	ENSOGAG00000007197	TNRC6C	91	88.235	Otolemur_garnettii
ENSSARG00000006816	TNRC6C	87	91.111	ENSOARG00000006041	TNRC6C	82	91.111	Ovis_aries
ENSSARG00000006816	TNRC6C	91	88.235	ENSPPAG00000027160	TNRC6C	91	90.517	Pan_paniscus
ENSSARG00000006816	TNRC6C	91	90.756	ENSPPRG00000018881	TNRC6C	91	92.241	Panthera_pardus
ENSSARG00000006816	TNRC6C	81	91.630	ENSPTIG00000008791	TNRC6C	80	91.810	Panthera_tigris_altaica
ENSSARG00000006816	TNRC6C	91	88.235	ENSPTRG00000009699	TNRC6C	91	90.086	Pan_troglodytes
ENSSARG00000006816	TNRC6C	91	88.235	ENSPANG00000019994	TNRC6C	91	89.655	Papio_anubis
ENSSARG00000006816	TNRC6C	81	71.074	ENSPKIG00000005428	tnrc6c1	70	71.074	Paramormyrops_kingsleyae
ENSSARG00000006816	TNRC6C	91	89.916	ENSPSIG00000018069	TNRC6C	91	89.916	Pelodiscus_sinensis
ENSSARG00000006816	TNRC6C	72	61.345	ENSPMGG00000022911	tnrc6c1	68	62.185	Periophthalmus_magnuspinnatus
ENSSARG00000006816	TNRC6C	91	88.106	ENSPEMG00000009785	Tnrc6c	93	88.362	Peromyscus_maniculatus_bairdii
ENSSARG00000006816	TNRC6C	56	74.898	ENSPCIG00000017421	-	99	73.258	Phascolarctos_cinereus
ENSSARG00000006816	TNRC6C	91	60.905	ENSPFOG00000012560	tnrc6c1	88	52.174	Poecilia_formosa
ENSSARG00000006816	TNRC6C	88	67.227	ENSPLAG00000021055	tnrc6c1	70	60.905	Poecilia_latipinna
ENSSARG00000006816	TNRC6C	91	88.235	ENSPPYG00000008679	TNRC6C	83	88.235	Pongo_abelii
ENSSARG00000006816	TNRC6C	89	88.106	ENSPCAG00000012510	TNRC6C	90	88.362	Procavia_capensis
ENSSARG00000006816	TNRC6C	88	89.868	ENSPCOG00000021451	TNRC6C	91	90.086	Propithecus_coquereli
ENSSARG00000006816	TNRC6C	91	95.763	ENSPVAG00000002008	TNRC6C	91	95.763	Pteropus_vampyrus
ENSSARG00000006816	TNRC6C	90	66.387	ENSPNYG00000014477	tnrc6c1	83	61.654	Pundamilia_nyererei
ENSSARG00000006816	TNRC6C	88	89.427	ENSRNOG00000022395	Tnrc6c	91	89.655	Rattus_norvegicus
ENSSARG00000006816	TNRC6C	91	88.235	ENSRBIG00000027777	TNRC6C	91	90.086	Rhinopithecus_bieti
ENSSARG00000006816	TNRC6C	91	88.235	ENSRROG00000042912	TNRC6C	91	90.086	Rhinopithecus_roxellana
ENSSARG00000006816	TNRC6C	91	88.235	ENSSBOG00000023981	TNRC6C	91	88.235	Saimiri_boliviensis_boliviensis
ENSSARG00000006816	TNRC6C	63	53.061	ENSSFOG00015004735	-	80	54.922	Scleropages_formosus
ENSSARG00000006816	TNRC6C	66	71.901	ENSSFOG00015006475	tnrc6c1	65	71.901	Scleropages_formosus
ENSSARG00000006816	TNRC6C	91	60.905	ENSSMAG00000012761	tnrc6c1	82	61.475	Scophthalmus_maximus
ENSSARG00000006816	TNRC6C	91	62.551	ENSSDUG00000002366	tnrc6c1	65	62.551	Seriola_dumerili
ENSSARG00000006816	TNRC6C	82	62.551	ENSSLDG00000025613	tnrc6c1	69	62.791	Seriola_lalandi_dorsalis
ENSSARG00000006816	TNRC6C	71	89.916	ENSSPUG00000007341	TNRC6C	81	89.916	Sphenodon_punctatus
ENSSARG00000006816	TNRC6C	67	62.551	ENSSPAG00000014977	tnrc6c1	64	62.551	Stegastes_partitus
ENSSARG00000006816	TNRC6C	88	94.118	ENSSSCG00000034373	TNRC6C	91	94.118	Sus_scrofa
ENSSARG00000006816	TNRC6C	91	90.756	ENSTGUG00000007733	TNRC6C	91	90.756	Taeniopygia_guttata
ENSSARG00000006816	TNRC6C	67	62.656	ENSTRUG00000011685	tnrc6c1	70	63.780	Takifugu_rubripes
ENSSARG00000006816	TNRC6C	91	66.116	ENSTNIG00000005273	tnrc6c1	84	66.116	Tetraodon_nigroviridis
ENSSARG00000006816	TNRC6C	59	86.344	ENSTBEG00000005046	TNRC6C	88	86.638	Tupaia_belangeri
ENSSARG00000006816	TNRC6C	91	94.118	ENSTTRG00000010828	TNRC6C	91	94.118	Tursiops_truncatus
ENSSARG00000006816	TNRC6C	91	93.277	ENSUMAG00000013614	TNRC6C	85	93.277	Ursus_maritimus
ENSSARG00000006816	TNRC6C	88	94.958	ENSVVUG00000015268	TNRC6C	91	94.958	Vulpes_vulpes
ENSSARG00000006816	TNRC6C	88	82.353	ENSXETG00000019470	tnrc6c	91	82.353	Xenopus_tropicalis
ENSSARG00000006816	TNRC6C	90	67.227	ENSXMAG00000025971	tnrc6c1	69	61.317	Xiphophorus_maculatus