EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000007016 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 26902 bases
Position: chrGeneScaffold_2070:6933-33834
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000006386	SF3b1	PF08920.10	3.3e-17	1	2
ENSSARP00000006386	SF3b1	PF08920.10	3.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000007044	SF3B1-201	3909	-	ENSSARP00000006386	1303 (aa)	-	UPI000158167C

Gene Model

Click here to download ENSSARG00000007016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000007016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000007016	SF3B1	76	100.000	ENSG00000115524	SF3B1	94	97.788	Homo_sapiens
ENSSARG00000007016	SF3B1	75	99.292	ENSAPOG00000011894	sf3b1	75	98.944	Acanthochromis_polyacanthus
ENSSARG00000007016	SF3B1	76	100.000	ENSAMEG00000013809	SF3B1	76	100.000	Ailuropoda_melanoleuca
ENSSARG00000007016	SF3B1	76	98.768	ENSACIG00000020910	sf3b1	72	98.768	Amphilophus_citrinellus
ENSSARG00000007016	SF3B1	75	98.944	ENSAOCG00000004478	sf3b1	75	98.944	Amphiprion_ocellaris
ENSSARG00000007016	SF3B1	75	98.944	ENSAPEG00000012937	sf3b1	75	98.944	Amphiprion_percula
ENSSARG00000007016	SF3B1	75	98.938	ENSATEG00000020435	sf3b1	75	98.938	Anabas_testudineus
ENSSARG00000007016	SF3B1	76	99.824	ENSAPLG00000003993	SF3B1	76	99.824	Anas_platyrhynchos
ENSSARG00000007016	SF3B1	76	99.648	ENSACAG00000009612	SF3B1	76	99.648	Anolis_carolinensis
ENSSARG00000007016	SF3B1	76	100.000	ENSANAG00000021577	SF3B1	79	100.000	Aotus_nancymaae
ENSSARG00000007016	SF3B1	76	98.768	ENSACLG00000023470	sf3b1	75	98.768	Astatotilapia_calliptera
ENSSARG00000007016	SF3B1	76	98.592	ENSAMXG00000002219	sf3b1	75	98.592	Astyanax_mexicanus
ENSSARG00000007016	SF3B1	76	100.000	ENSBTAG00000008915	SF3B1	76	100.000	Bos_taurus
ENSSARG00000007016	SF3B1	75	80.071	WBGene00011605	sftb-1	75	80.071	Caenorhabditis_elegans
ENSSARG00000007016	SF3B1	76	100.000	ENSCJAG00000003902	SF3B1	76	100.000	Callithrix_jacchus
ENSSARG00000007016	SF3B1	76	100.000	ENSCAFG00000010826	SF3B1	76	100.000	Canis_familiaris
ENSSARG00000007016	SF3B1	76	100.000	ENSCAFG00020004750	SF3B1	76	100.000	Canis_lupus_dingo
ENSSARG00000007016	SF3B1	76	100.000	ENSCHIG00000015226	SF3B1	77	100.000	Capra_hircus
ENSSARG00000007016	SF3B1	76	100.000	ENSTSYG00000009214	SF3B1	76	100.000	Carlito_syrichta
ENSSARG00000007016	SF3B1	76	100.000	ENSCAPG00000006547	SF3B1	76	100.000	Cavia_aperea
ENSSARG00000007016	SF3B1	76	100.000	ENSCPOG00000009353	SF3B1	77	100.000	Cavia_porcellus
ENSSARG00000007016	SF3B1	76	100.000	ENSCCAG00000020506	SF3B1	76	100.000	Cebus_capucinus
ENSSARG00000007016	SF3B1	76	100.000	ENSCATG00000035735	SF3B1	76	100.000	Cercocebus_atys
ENSSARG00000007016	SF3B1	76	100.000	ENSCLAG00000014767	SF3B1	76	100.000	Chinchilla_lanigera
ENSSARG00000007016	SF3B1	76	100.000	ENSCSAG00000011505	SF3B1	76	100.000	Chlorocebus_sabaeus
ENSSARG00000007016	SF3B1	58	96.154	ENSCHOG00000009860	SF3B1	58	96.154	Choloepus_hoffmanni
ENSSARG00000007016	SF3B1	76	99.824	ENSCPBG00000021902	SF3B1	79	99.824	Chrysemys_picta_bellii
ENSSARG00000007016	SF3B1	76	89.418	ENSCSAVG00000002559	-	84	89.418	Ciona_savignyi
ENSSARG00000007016	SF3B1	76	100.000	ENSCANG00000029415	SF3B1	76	100.000	Colobus_angolensis_palliatus
ENSSARG00000007016	SF3B1	76	100.000	ENSCGRG00001016990	Sf3b1	76	100.000	Cricetulus_griseus_chok1gshd
ENSSARG00000007016	SF3B1	76	100.000	ENSCGRG00000005301	Sf3b1	76	100.000	Cricetulus_griseus_crigri
ENSSARG00000007016	SF3B1	71	98.833	ENSCSEG00000003860	sf3b1	72	98.833	Cynoglossus_semilaevis
ENSSARG00000007016	SF3B1	71	99.806	ENSCVAG00000003680	sf3b1	73	99.806	Cyprinodon_variegatus
ENSSARG00000007016	SF3B1	75	98.592	ENSDARG00000056138	sf3b1	75	98.592	Danio_rerio
ENSSARG00000007016	SF3B1	76	100.000	ENSDNOG00000011754	SF3B1	76	100.000	Dasypus_novemcinctus
ENSSARG00000007016	SF3B1	73	100.000	ENSDORG00000002399	Sf3b1	76	100.000	Dipodomys_ordii
ENSSARG00000007016	SF3B1	74	90.476	FBgn0031266	Sf3b1	75	90.476	Drosophila_melanogaster
ENSSARG00000007016	SF3B1	59	99.363	ENSETEG00000009188	SF3B1	72	99.363	Echinops_telfairi
ENSSARG00000007016	SF3B1	76	95.599	ENSEBUG00000004325	sf3b1	81	95.599	Eptatretus_burgeri
ENSSARG00000007016	SF3B1	76	100.000	ENSEASG00005020159	SF3B1	74	100.000	Equus_asinus_asinus
ENSSARG00000007016	SF3B1	76	100.000	ENSECAG00000021657	SF3B1	74	100.000	Equus_caballus
ENSSARG00000007016	SF3B1	54	100.000	ENSEEUG00000000836	SF3B1	54	100.000	Erinaceus_europaeus
ENSSARG00000007016	SF3B1	76	98.768	ENSELUG00000005977	sf3b1	73	98.768	Esox_lucius
ENSSARG00000007016	SF3B1	76	100.000	ENSFCAG00000005038	SF3B1	76	100.000	Felis_catus
ENSSARG00000007016	SF3B1	76	100.000	ENSFALG00000004281	SF3B1	76	100.000	Ficedula_albicollis
ENSSARG00000007016	SF3B1	76	100.000	ENSFDAG00000017510	SF3B1	76	100.000	Fukomys_damarensis
ENSSARG00000007016	SF3B1	75	98.768	ENSFHEG00000014333	sf3b1	79	98.768	Fundulus_heteroclitus
ENSSARG00000007016	SF3B1	76	98.415	ENSGMOG00000006773	sf3b1	75	98.415	Gadus_morhua
ENSSARG00000007016	SF3B1	76	99.824	ENSGALG00000008038	SF3B1	76	99.824	Gallus_gallus
ENSSARG00000007016	SF3B1	75	98.592	ENSGAFG00000000704	sf3b1	76	98.592	Gambusia_affinis
ENSSARG00000007016	SF3B1	75	98.944	ENSGACG00000008839	sf3b1	75	98.944	Gasterosteus_aculeatus
ENSSARG00000007016	SF3B1	76	99.824	ENSGAGG00000017478	SF3B1	76	99.824	Gopherus_agassizii
ENSSARG00000007016	SF3B1	76	100.000	ENSGGOG00000009264	SF3B1	78	100.000	Gorilla_gorilla
ENSSARG00000007016	SF3B1	75	98.940	ENSHBUG00000007705	sf3b1	75	98.940	Haplochromis_burtoni
ENSSARG00000007016	SF3B1	76	100.000	ENSHGLG00000008285	-	76	100.000	Heterocephalus_glaber_female
ENSSARG00000007016	SF3B1	76	100.000	ENSHGLG00100005535	-	76	100.000	Heterocephalus_glaber_male
ENSSARG00000007016	SF3B1	76	99.120	ENSHCOG00000016775	sf3b1	75	99.120	Hippocampus_comes
ENSSARG00000007016	SF3B1	76	98.768	ENSIPUG00000013171	sf3b1	76	98.768	Ictalurus_punctatus
ENSSARG00000007016	SF3B1	76	100.000	ENSSTOG00000011034	SF3B1	76	100.000	Ictidomys_tridecemlineatus
ENSSARG00000007016	SF3B1	76	100.000	ENSJJAG00000010903	Sf3b1	77	100.000	Jaculus_jaculus
ENSSARG00000007016	SF3B1	76	98.768	ENSKMAG00000004009	sf3b1	75	98.768	Kryptolebias_marmoratus
ENSSARG00000007016	SF3B1	75	98.592	ENSLBEG00000022208	sf3b1	75	98.592	Labrus_bergylta
ENSSARG00000007016	SF3B1	76	92.443	ENSLACG00000014832	SF3B1	75	92.443	Latimeria_chalumnae
ENSSARG00000007016	SF3B1	76	99.296	ENSLOCG00000003899	sf3b1	75	99.296	Lepisosteus_oculatus
ENSSARG00000007016	SF3B1	76	100.000	ENSLAFG00000001956	SF3B1	76	100.000	Loxodonta_africana
ENSSARG00000007016	SF3B1	76	100.000	ENSMMUG00000022430	SF3B1	76	100.000	Macaca_mulatta
ENSSARG00000007016	SF3B1	76	100.000	ENSMNEG00000042333	SF3B1	79	100.000	Macaca_nemestrina
ENSSARG00000007016	SF3B1	76	100.000	ENSMLEG00000026141	SF3B1	82	100.000	Mandrillus_leucophaeus
ENSSARG00000007016	SF3B1	76	98.592	ENSMAMG00000010241	sf3b1	75	98.592	Mastacembelus_armatus
ENSSARG00000007016	SF3B1	76	98.768	ENSMZEG00005021254	sf3b1	75	98.768	Maylandia_zebra
ENSSARG00000007016	SF3B1	76	99.824	ENSMGAG00000007017	SF3B1	77	99.824	Meleagris_gallopavo
ENSSARG00000007016	SF3B1	75	100.000	ENSMAUG00000009071	Sf3b1	74	100.000	Mesocricetus_auratus
ENSSARG00000007016	SF3B1	76	100.000	ENSMICG00000013879	SF3B1	76	100.000	Microcebus_murinus
ENSSARG00000007016	SF3B1	75	100.000	ENSMOCG00000000455	Sf3b1	77	100.000	Microtus_ochrogaster
ENSSARG00000007016	SF3B1	59	100.000	ENSMMOG00000000475	sf3b1	70	100.000	Mola_mola
ENSSARG00000007016	SF3B1	76	99.824	ENSMODG00000012275	SF3B1	76	99.824	Monodelphis_domestica
ENSSARG00000007016	SF3B1	75	98.592	ENSMALG00000017211	sf3b1	75	98.592	Monopterus_albus
ENSSARG00000007016	SF3B1	76	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	76	100.000	Mus_caroli
ENSSARG00000007016	SF3B1	76	100.000	ENSMUSG00000025982	Sf3b1	76	100.000	Mus_musculus
ENSSARG00000007016	SF3B1	76	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	76	100.000	Mus_spretus
ENSSARG00000007016	SF3B1	76	100.000	ENSMPUG00000007799	SF3B1	76	100.000	Mustela_putorius_furo
ENSSARG00000007016	SF3B1	76	99.363	ENSMLUG00000000840	SF3B1	76	99.363	Myotis_lucifugus
ENSSARG00000007016	SF3B1	76	100.000	ENSNGAG00000021884	-	76	100.000	Nannospalax_galili
ENSSARG00000007016	SF3B1	71	98.768	ENSNBRG00000015816	sf3b1	72	98.768	Neolamprologus_brichardi
ENSSARG00000007016	SF3B1	76	100.000	ENSNLEG00000006861	SF3B1	76	100.000	Nomascus_leucogenys
ENSSARG00000007016	SF3B1	73	100.000	ENSOPRG00000008596	SF3B1	73	100.000	Ochotona_princeps
ENSSARG00000007016	SF3B1	76	100.000	ENSODEG00000011153	-	76	100.000	Octodon_degus
ENSSARG00000007016	SF3B1	76	98.768	ENSONIG00000013758	sf3b1	75	98.768	Oreochromis_niloticus
ENSSARG00000007016	SF3B1	64	100.000	ENSOCUG00000012722	-	74	100.000	Oryctolagus_cuniculus
ENSSARG00000007016	SF3B1	75	98.592	ENSORLG00000020219	sf3b1	75	98.592	Oryzias_latipes
ENSSARG00000007016	SF3B1	75	98.592	ENSORLG00020001746	sf3b1	75	98.592	Oryzias_latipes_hni
ENSSARG00000007016	SF3B1	75	98.592	ENSOMEG00000019231	sf3b1	75	98.592	Oryzias_melastigma
ENSSARG00000007016	SF3B1	76	100.000	ENSOARG00000015374	SF3B1	76	100.000	Ovis_aries
ENSSARG00000007016	SF3B1	76	100.000	ENSPPAG00000035007	SF3B1	76	100.000	Pan_paniscus
ENSSARG00000007016	SF3B1	76	100.000	ENSPPRG00000009090	SF3B1	76	100.000	Panthera_pardus
ENSSARG00000007016	SF3B1	76	100.000	ENSPTIG00000021557	SF3B1	76	100.000	Panthera_tigris_altaica
ENSSARG00000007016	SF3B1	76	100.000	ENSPTRG00000012771	SF3B1	78	100.000	Pan_troglodytes
ENSSARG00000007016	SF3B1	76	100.000	ENSPANG00000013417	SF3B1	76	100.000	Papio_anubis
ENSSARG00000007016	SF3B1	76	98.592	ENSPKIG00000000784	sf3b1	75	98.592	Paramormyrops_kingsleyae
ENSSARG00000007016	SF3B1	76	99.824	ENSPSIG00000017222	SF3B1	76	99.824	Pelodiscus_sinensis
ENSSARG00000007016	SF3B1	66	99.775	ENSPMGG00000004330	sf3b1	71	99.775	Periophthalmus_magnuspinnatus
ENSSARG00000007016	SF3B1	76	100.000	ENSPEMG00000010699	Sf3b1	77	100.000	Peromyscus_maniculatus_bairdii
ENSSARG00000007016	SF3B1	76	95.951	ENSPMAG00000001311	sf3b1	75	95.951	Petromyzon_marinus
ENSSARG00000007016	SF3B1	76	99.824	ENSPCIG00000010642	SF3B1	76	99.824	Phascolarctos_cinereus
ENSSARG00000007016	SF3B1	75	98.415	ENSPFOG00000000073	sf3b1	75	98.415	Poecilia_formosa
ENSSARG00000007016	SF3B1	75	98.415	ENSPLAG00000002293	sf3b1	75	98.415	Poecilia_latipinna
ENSSARG00000007016	SF3B1	75	98.415	ENSPMEG00000000446	sf3b1	73	98.415	Poecilia_mexicana
ENSSARG00000007016	SF3B1	75	98.592	ENSPREG00000019652	sf3b1	75	98.592	Poecilia_reticulata
ENSSARG00000007016	SF3B1	64	100.000	ENSPPYG00000013044	SF3B1	73	100.000	Pongo_abelii
ENSSARG00000007016	SF3B1	76	100.000	ENSPCAG00000009292	SF3B1	76	100.000	Procavia_capensis
ENSSARG00000007016	SF3B1	76	100.000	ENSPCOG00000024074	SF3B1	76	100.000	Propithecus_coquereli
ENSSARG00000007016	SF3B1	76	100.000	ENSPVAG00000008302	SF3B1	76	100.000	Pteropus_vampyrus
ENSSARG00000007016	SF3B1	76	98.768	ENSPNYG00000014939	sf3b1	75	98.768	Pundamilia_nyererei
ENSSARG00000007016	SF3B1	75	98.768	ENSPNAG00000008288	sf3b1	75	98.768	Pygocentrus_nattereri
ENSSARG00000007016	SF3B1	76	100.000	ENSRNOG00000013516	Sf3b1	76	100.000	Rattus_norvegicus
ENSSARG00000007016	SF3B1	76	100.000	ENSRBIG00000026096	SF3B1	76	100.000	Rhinopithecus_bieti
ENSSARG00000007016	SF3B1	76	100.000	ENSRROG00000031308	SF3B1	76	100.000	Rhinopithecus_roxellana
ENSSARG00000007016	SF3B1	76	100.000	ENSSBOG00000020080	SF3B1	76	100.000	Saimiri_boliviensis_boliviensis
ENSSARG00000007016	SF3B1	76	99.824	ENSSHAG00000017564	SF3B1	76	99.824	Sarcophilus_harrisii
ENSSARG00000007016	SF3B1	75	98.768	ENSSFOG00015021535	sf3b1	77	98.768	Scleropages_formosus
ENSSARG00000007016	SF3B1	75	98.761	ENSSMAG00000013977	sf3b1	79	98.761	Scophthalmus_maximus
ENSSARG00000007016	SF3B1	75	98.592	ENSSDUG00000017422	sf3b1	75	98.592	Seriola_dumerili
ENSSARG00000007016	SF3B1	75	98.592	ENSSLDG00000019495	sf3b1	75	98.592	Seriola_lalandi_dorsalis
ENSSARG00000007016	SF3B1	76	99.648	ENSSPUG00000000410	SF3B1	76	99.648	Sphenodon_punctatus
ENSSARG00000007016	SF3B1	75	98.944	ENSSPAG00000010451	sf3b1	77	98.759	Stegastes_partitus
ENSSARG00000007016	SF3B1	70	100.000	ENSSSCG00000016075	SF3B1	79	100.000	Sus_scrofa
ENSSARG00000007016	SF3B1	76	99.824	ENSTGUG00000010553	SF3B1	76	99.824	Taeniopygia_guttata
ENSSARG00000007016	SF3B1	76	98.768	ENSTRUG00000015534	sf3b1	75	98.768	Takifugu_rubripes
ENSSARG00000007016	SF3B1	61	100.000	ENSTBEG00000008714	SF3B1	67	100.000	Tupaia_belangeri
ENSSARG00000007016	SF3B1	63	100.000	ENSTTRG00000003414	SF3B1	63	100.000	Tursiops_truncatus
ENSSARG00000007016	SF3B1	70	100.000	ENSUAMG00000018506	SF3B1	85	100.000	Ursus_americanus
ENSSARG00000007016	SF3B1	76	100.000	ENSUMAG00000020945	SF3B1	76	100.000	Ursus_maritimus
ENSSARG00000007016	SF3B1	72	100.000	ENSVPAG00000005798	SF3B1	73	100.000	Vicugna_pacos
ENSSARG00000007016	SF3B1	76	100.000	ENSVVUG00000025948	SF3B1	72	100.000	Vulpes_vulpes
ENSSARG00000007016	SF3B1	76	99.824	ENSXETG00000013339	sf3b1	76	99.824	Xenopus_tropicalis
ENSSARG00000007016	SF3B1	75	98.592	ENSXCOG00000018086	sf3b1	77	98.592	Xiphophorus_couchianus
ENSSARG00000007016	SF3B1	75	98.592	ENSXMAG00000007369	sf3b1	75	98.592	Xiphophorus_maculatus