EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000007274 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 36672 bases
Position: chrGeneScaffold_3314:235-36906
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000006596	MIF4G_like	PF09088.11	1.2e-23	1	1
ENSSARP00000006596	MIF4G_like_2	PF09090.11	8.5e-86	1	1
ENSSARP00000006596	MIF4G	PF02854.19	8.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000007277	NCBP1-201	2337	-	ENSSARP00000006596	778 (aa)	-	UPI00015812D0

Gene Model

Click here to download ENSSARG00000007274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000007274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000007274	NCBP1	87	90.830	ENSG00000136937	NCBP1	78	98.438	Homo_sapiens
ENSSARG00000007274	NCBP1	86	72.294	ENSAPOG00000008002	NCBP1	85	71.212	Acanthochromis_polyacanthus
ENSSARG00000007274	NCBP1	87	91.048	ENSAMEG00000004763	NCBP1	85	91.048	Ailuropoda_melanoleuca
ENSSARG00000007274	NCBP1	86	73.102	ENSACIG00000000274	NCBP1	85	72.017	Amphilophus_citrinellus
ENSSARG00000007274	NCBP1	86	72.727	ENSAOCG00000021148	NCBP1	85	71.645	Amphiprion_ocellaris
ENSSARG00000007274	NCBP1	86	72.727	ENSAPEG00000001701	NCBP1	85	71.645	Amphiprion_percula
ENSSARG00000007274	NCBP1	86	72.727	ENSATEG00000006929	NCBP1	85	72.078	Anabas_testudineus
ENSSARG00000007274	NCBP1	83	81.602	ENSAPLG00000016318	NCBP1	86	81.818	Anas_platyrhynchos
ENSSARG00000007274	NCBP1	87	78.678	ENSACAG00000004409	NCBP1	75	78.465	Anolis_carolinensis
ENSSARG00000007274	NCBP1	85	91.048	ENSANAG00000025744	NCBP1	85	91.048	Aotus_nancymaae
ENSSARG00000007274	NCBP1	86	71.861	ENSACLG00000014812	NCBP1	77	85.000	Astatotilapia_calliptera
ENSSARG00000007274	NCBP1	86	70.043	ENSAMXG00000016364	NCBP1	85	69.181	Astyanax_mexicanus
ENSSARG00000007274	NCBP1	87	90.611	ENSBTAG00000009732	NCBP1	85	90.611	Bos_taurus
ENSSARG00000007274	NCBP1	78	30.882	WBGene00018156	ncbp-1	76	30.882	Caenorhabditis_elegans
ENSSARG00000007274	NCBP1	87	90.830	ENSCJAG00000010840	NCBP1	94	90.830	Callithrix_jacchus
ENSSARG00000007274	NCBP1	87	90.830	ENSCAFG00000002445	NCBP1	85	90.830	Canis_familiaris
ENSSARG00000007274	NCBP1	87	90.830	ENSCAFG00020017997	NCBP1	82	98.000	Canis_lupus_dingo
ENSSARG00000007274	NCBP1	87	90.175	ENSCHIG00000020139	NCBP1	85	90.175	Capra_hircus
ENSSARG00000007274	NCBP1	62	96.000	ENSCAPG00000014252	NCBP1	67	96.000	Cavia_aperea
ENSSARG00000007274	NCBP1	85	90.830	ENSCPOG00000012573	NCBP1	86	90.830	Cavia_porcellus
ENSSARG00000007274	NCBP1	87	91.048	ENSCCAG00000032297	NCBP1	85	91.048	Cebus_capucinus
ENSSARG00000007274	NCBP1	87	90.830	ENSCATG00000010052	NCBP1	79	97.000	Cercocebus_atys
ENSSARG00000007274	NCBP1	87	90.830	ENSCLAG00000014339	NCBP1	85	90.830	Chinchilla_lanigera
ENSSARG00000007274	NCBP1	87	90.830	ENSCSAG00000010929	NCBP1	85	90.830	Chlorocebus_sabaeus
ENSSARG00000007274	NCBP1	76	97.196	ENSCHOG00000010332	NCBP1	75	97.143	Choloepus_hoffmanni
ENSSARG00000007274	NCBP1	72	91.000	ENSCPBG00000024344	NCBP1	77	91.000	Chrysemys_picta_bellii
ENSSARG00000007274	NCBP1	86	48.812	ENSCING00000008990	-	85	48.380	Ciona_intestinalis
ENSSARG00000007274	NCBP1	79	53.333	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSSARG00000007274	NCBP1	87	90.830	ENSCANG00000036913	NCBP1	85	90.830	Colobus_angolensis_palliatus
ENSSARG00000007274	NCBP1	87	89.520	ENSCGRG00001015771	Ncbp1	85	89.520	Cricetulus_griseus_chok1gshd
ENSSARG00000007274	NCBP1	87	89.520	ENSCGRG00000010311	Ncbp1	86	89.520	Cricetulus_griseus_crigri
ENSSARG00000007274	NCBP1	86	72.078	ENSCSEG00000012377	NCBP1	77	85.000	Cynoglossus_semilaevis
ENSSARG00000007274	NCBP1	86	69.114	ENSCVAG00000008795	NCBP1	85	70.194	Cyprinodon_variegatus
ENSSARG00000007274	NCBP1	87	89.956	ENSDNOG00000006885	NCBP1	82	96.000	Dasypus_novemcinctus
ENSSARG00000007274	NCBP1	87	89.301	ENSDORG00000013652	Ncbp1	85	89.301	Dipodomys_ordii
ENSSARG00000007274	NCBP1	86	50.851	FBgn0022942	Cbp80	85	51.398	Drosophila_melanogaster
ENSSARG00000007274	NCBP1	87	85.808	ENSETEG00000009705	NCBP1	85	85.808	Echinops_telfairi
ENSSARG00000007274	NCBP1	87	65.293	ENSEBUG00000008386	NCBP1	85	64.642	Eptatretus_burgeri
ENSSARG00000007274	NCBP1	87	89.956	ENSEASG00005022795	NCBP1	85	89.956	Equus_asinus_asinus
ENSSARG00000007274	NCBP1	87	90.175	ENSECAG00000013847	NCBP1	85	90.175	Equus_caballus
ENSSARG00000007274	NCBP1	81	83.373	ENSEEUG00000015973	NCBP1	84	83.373	Erinaceus_europaeus
ENSSARG00000007274	NCBP1	86	68.898	ENSELUG00000022519	NCBP1	85	70.194	Esox_lucius
ENSSARG00000007274	NCBP1	87	90.830	ENSFCAG00000001206	NCBP1	85	90.830	Felis_catus
ENSSARG00000007274	NCBP1	87	80.043	ENSFALG00000001193	NCBP1	87	80.258	Ficedula_albicollis
ENSSARG00000007274	NCBP1	87	90.611	ENSFDAG00000010864	NCBP1	86	90.611	Fukomys_damarensis
ENSSARG00000007274	NCBP1	86	71.490	ENSFHEG00000000655	NCBP1	85	70.626	Fundulus_heteroclitus
ENSSARG00000007274	NCBP1	86	68.251	ENSGMOG00000008653	NCBP1	84	68.251	Gadus_morhua
ENSSARG00000007274	NCBP1	87	81.699	ENSGALG00000002087	NCBP1	85	81.917	Gallus_gallus
ENSSARG00000007274	NCBP1	86	71.772	ENSGAFG00000017787	NCBP1	85	71.554	Gambusia_affinis
ENSSARG00000007274	NCBP1	86	71.336	ENSGACG00000016772	NCBP1	84	70.690	Gasterosteus_aculeatus
ENSSARG00000007274	NCBP1	87	79.482	ENSGAGG00000019483	NCBP1	77	91.000	Gopherus_agassizii
ENSSARG00000007274	NCBP1	87	90.830	ENSGGOG00000001376	NCBP1	85	90.830	Gorilla_gorilla
ENSSARG00000007274	NCBP1	86	71.861	ENSHBUG00000020843	NCBP1	85	71.212	Haplochromis_burtoni
ENSSARG00000007274	NCBP1	87	83.406	ENSHGLG00000018112	-	85	83.406	Heterocephalus_glaber_female
ENSSARG00000007274	NCBP1	87	90.830	ENSHGLG00000001882	NCBP1	85	90.830	Heterocephalus_glaber_female
ENSSARG00000007274	NCBP1	87	83.406	ENSHGLG00100017373	-	85	83.406	Heterocephalus_glaber_male
ENSSARG00000007274	NCBP1	87	90.830	ENSHGLG00100013014	NCBP1	85	90.830	Heterocephalus_glaber_male
ENSSARG00000007274	NCBP1	66	69.978	ENSHCOG00000000204	NCBP1	79	69.978	Hippocampus_comes
ENSSARG00000007274	NCBP1	86	71.490	ENSIPUG00000007275	ncbp1	85	70.842	Ictalurus_punctatus
ENSSARG00000007274	NCBP1	87	90.393	ENSSTOG00000002695	NCBP1	85	90.393	Ictidomys_tridecemlineatus
ENSSARG00000007274	NCBP1	86	71.645	ENSKMAG00000003594	NCBP1	85	70.563	Kryptolebias_marmoratus
ENSSARG00000007274	NCBP1	86	70.190	ENSLBEG00000011661	NCBP1	85	69.345	Labrus_bergylta
ENSSARG00000007274	NCBP1	87	67.660	ENSLACG00000013955	NCBP1	85	67.442	Latimeria_chalumnae
ENSSARG00000007274	NCBP1	86	73.650	ENSLOCG00000009579	NCBP1	85	73.650	Lepisosteus_oculatus
ENSSARG00000007274	NCBP1	87	90.393	ENSLAFG00000005999	NCBP1	85	90.393	Loxodonta_africana
ENSSARG00000007274	NCBP1	87	90.830	ENSMFAG00000030994	NCBP1	79	97.000	Macaca_fascicularis
ENSSARG00000007274	NCBP1	87	90.830	ENSMMUG00000012281	NCBP1	79	97.000	Macaca_mulatta
ENSSARG00000007274	NCBP1	87	90.830	ENSMNEG00000042790	NCBP1	85	90.830	Macaca_nemestrina
ENSSARG00000007274	NCBP1	87	90.830	ENSMLEG00000030374	NCBP1	85	90.830	Mandrillus_leucophaeus
ENSSARG00000007274	NCBP1	86	72.727	ENSMAMG00000014806	NCBP1	85	71.429	Mastacembelus_armatus
ENSSARG00000007274	NCBP1	85	71.335	ENSMZEG00005009290	-	86	71.116	Maylandia_zebra
ENSSARG00000007274	NCBP1	86	71.861	ENSMZEG00005003469	NCBP1	85	71.212	Maylandia_zebra
ENSSARG00000007274	NCBP1	87	89.520	ENSMAUG00000020583	Ncbp1	85	89.520	Mesocricetus_auratus
ENSSARG00000007274	NCBP1	87	90.611	ENSMICG00000012682	NCBP1	85	90.611	Microcebus_murinus
ENSSARG00000007274	NCBP1	87	89.301	ENSMOCG00000015818	Ncbp1	85	89.301	Microtus_ochrogaster
ENSSARG00000007274	NCBP1	72	85.000	ENSMMOG00000002610	NCBP1	78	85.000	Mola_mola
ENSSARG00000007274	NCBP1	86	86.900	ENSMODG00000003202	NCBP1	84	86.463	Monodelphis_domestica
ENSSARG00000007274	NCBP1	86	71.335	ENSMALG00000003547	NCBP1	85	71.116	Monopterus_albus
ENSSARG00000007274	NCBP1	87	89.083	MGP_CAROLIEiJ_G0025982	Ncbp1	85	89.083	Mus_caroli
ENSSARG00000007274	NCBP1	87	89.083	ENSMUSG00000028330	Ncbp1	85	89.083	Mus_musculus
ENSSARG00000007274	NCBP1	87	89.520	MGP_PahariEiJ_G0028318	Ncbp1	85	89.520	Mus_pahari
ENSSARG00000007274	NCBP1	87	89.083	MGP_SPRETEiJ_G0026945	Ncbp1	85	89.083	Mus_spretus
ENSSARG00000007274	NCBP1	87	90.611	ENSMPUG00000006399	NCBP1	85	90.611	Mustela_putorius_furo
ENSSARG00000007274	NCBP1	87	89.301	ENSMLUG00000015201	NCBP1	86	89.301	Myotis_lucifugus
ENSSARG00000007274	NCBP1	87	89.738	ENSNGAG00000014101	Ncbp1	85	89.738	Nannospalax_galili
ENSSARG00000007274	NCBP1	74	71.507	ENSNBRG00000014674	NCBP1	93	70.137	Neolamprologus_brichardi
ENSSARG00000007274	NCBP1	87	90.830	ENSNLEG00000016909	NCBP1	79	97.000	Nomascus_leucogenys
ENSSARG00000007274	NCBP1	77	94.595	ENSMEUG00000010672	NCBP1	77	92.793	Notamacropus_eugenii
ENSSARG00000007274	NCBP1	67	100.000	ENSOPRG00000002144	-	69	100.000	Ochotona_princeps
ENSSARG00000007274	NCBP1	87	90.611	ENSODEG00000003232	NCBP1	79	100.000	Octodon_degus
ENSSARG00000007274	NCBP1	86	71.429	ENSONIG00000001502	NCBP1	85	70.779	Oreochromis_niloticus
ENSSARG00000007274	NCBP1	66	84.768	ENSOANG00000001918	NCBP1	83	84.768	Ornithorhynchus_anatinus
ENSSARG00000007274	NCBP1	85	89.865	ENSOCUG00000013853	NCBP1	82	89.865	Oryctolagus_cuniculus
ENSSARG00000007274	NCBP1	72	85.000	ENSORLG00000011008	NCBP1	78	85.000	Oryzias_latipes
ENSSARG00000007274	NCBP1	72	85.000	ENSORLG00020017455	NCBP1	78	85.000	Oryzias_latipes_hni
ENSSARG00000007274	NCBP1	86	69.957	ENSORLG00015012127	NCBP1	85	69.313	Oryzias_latipes_hsok
ENSSARG00000007274	NCBP1	86	69.957	ENSOMEG00000020698	NCBP1	85	69.742	Oryzias_melastigma
ENSSARG00000007274	NCBP1	87	90.830	ENSOGAG00000013888	NCBP1	85	90.830	Otolemur_garnettii
ENSSARG00000007274	NCBP1	87	90.175	ENSOARG00000011233	NCBP1	85	90.175	Ovis_aries
ENSSARG00000007274	NCBP1	87	90.830	ENSPPAG00000026462	NCBP1	85	90.830	Pan_paniscus
ENSSARG00000007274	NCBP1	87	90.830	ENSPPRG00000022574	NCBP1	85	90.830	Panthera_pardus
ENSSARG00000007274	NCBP1	87	90.830	ENSPTIG00000018507	NCBP1	85	90.830	Panthera_tigris_altaica
ENSSARG00000007274	NCBP1	87	90.830	ENSPTRG00000021167	NCBP1	85	90.830	Pan_troglodytes
ENSSARG00000007274	NCBP1	87	90.830	ENSPANG00000025591	NCBP1	79	97.000	Papio_anubis
ENSSARG00000007274	NCBP1	87	69.546	ENSPKIG00000015861	NCBP1	85	69.330	Paramormyrops_kingsleyae
ENSSARG00000007274	NCBP1	59	80.778	ENSPSIG00000009558	NCBP1	90	80.778	Pelodiscus_sinensis
ENSSARG00000007274	NCBP1	86	71.678	ENSPMGG00000020476	NCBP1	86	70.806	Periophthalmus_magnuspinnatus
ENSSARG00000007274	NCBP1	87	89.738	ENSPEMG00000020105	Ncbp1	85	89.738	Peromyscus_maniculatus_bairdii
ENSSARG00000007274	NCBP1	86	60.849	ENSPMAG00000005533	NCBP1	85	60.849	Petromyzon_marinus
ENSSARG00000007274	NCBP1	86	86.681	ENSPCIG00000015800	NCBP1	93	86.245	Phascolarctos_cinereus
ENSSARG00000007274	NCBP1	86	70.815	ENSPFOG00000004158	NCBP1	85	70.172	Poecilia_formosa
ENSSARG00000007274	NCBP1	86	71.922	ENSPLAG00000020002	NCBP1	85	71.058	Poecilia_latipinna
ENSSARG00000007274	NCBP1	86	71.706	ENSPMEG00000019821	NCBP1	85	70.842	Poecilia_mexicana
ENSSARG00000007274	NCBP1	86	71.767	ENSPREG00000006035	NCBP1	85	70.905	Poecilia_reticulata
ENSSARG00000007274	NCBP1	87	90.830	ENSPPYG00000019426	NCBP1	85	90.830	Pongo_abelii
ENSSARG00000007274	NCBP1	72	89.153	ENSPCAG00000009943	NCBP1	71	89.153	Procavia_capensis
ENSSARG00000007274	NCBP1	72	97.000	ENSPCOG00000020024	NCBP1	85	97.000	Propithecus_coquereli
ENSSARG00000007274	NCBP1	87	90.175	ENSPVAG00000005924	NCBP1	85	90.175	Pteropus_vampyrus
ENSSARG00000007274	NCBP1	72	85.000	ENSPNYG00000002140	NCBP1	77	85.000	Pundamilia_nyererei
ENSSARG00000007274	NCBP1	86	71.767	ENSPNAG00000027753	NCBP1	77	85.000	Pygocentrus_nattereri
ENSSARG00000007274	NCBP1	87	89.738	ENSRNOG00000023605	Ncbp1	85	89.738	Rattus_norvegicus
ENSSARG00000007274	NCBP1	87	90.830	ENSRBIG00000043175	NCBP1	86	90.830	Rhinopithecus_bieti
ENSSARG00000007274	NCBP1	87	90.830	ENSRROG00000029767	NCBP1	86	90.830	Rhinopithecus_roxellana
ENSSARG00000007274	NCBP1	87	91.048	ENSSBOG00000019378	NCBP1	85	91.048	Saimiri_boliviensis_boliviensis
ENSSARG00000007274	NCBP1	61	94.186	ENSSHAG00000015882	NCBP1	63	94.141	Sarcophilus_harrisii
ENSSARG00000007274	NCBP1	87	71.179	ENSSFOG00015001872	NCBP1	86	71.179	Scleropages_formosus
ENSSARG00000007274	NCBP1	86	70.996	ENSSMAG00000007463	NCBP1	85	70.563	Scophthalmus_maximus
ENSSARG00000007274	NCBP1	86	71.991	ENSSDUG00000007019	NCBP1	85	71.991	Seriola_dumerili
ENSSARG00000007274	NCBP1	86	71.645	ENSSLDG00000021924	NCBP1	85	70.996	Seriola_lalandi_dorsalis
ENSSARG00000007274	NCBP1	87	81.004	ENSSPUG00000008609	NCBP1	88	81.004	Sphenodon_punctatus
ENSSARG00000007274	NCBP1	86	72.294	ENSSPAG00000012550	NCBP1	85	71.645	Stegastes_partitus
ENSSARG00000007274	NCBP1	87	90.611	ENSSSCG00000005366	NCBP1	85	90.611	Sus_scrofa
ENSSARG00000007274	NCBP1	87	80.562	ENSTGUG00000001472	NCBP1	85	80.778	Taeniopygia_guttata
ENSSARG00000007274	NCBP1	86	71.212	ENSTRUG00000005287	NCBP1	85	70.346	Takifugu_rubripes
ENSSARG00000007274	NCBP1	87	84.934	ENSTBEG00000004035	NCBP1	85	84.934	Tupaia_belangeri
ENSSARG00000007274	NCBP1	83	90.830	ENSTTRG00000000507	NCBP1	82	90.830	Tursiops_truncatus
ENSSARG00000007274	NCBP1	87	90.830	ENSUAMG00000005471	NCBP1	85	90.830	Ursus_americanus
ENSSARG00000007274	NCBP1	85	86.681	ENSUMAG00000011865	NCBP1	82	98.000	Ursus_maritimus
ENSSARG00000007274	NCBP1	87	90.830	ENSVPAG00000010537	NCBP1	85	90.830	Vicugna_pacos
ENSSARG00000007274	NCBP1	87	90.830	ENSVVUG00000019725	NCBP1	85	90.830	Vulpes_vulpes
ENSSARG00000007274	NCBP1	87	75.599	ENSXETG00000010179	ncbp1	85	75.599	Xenopus_tropicalis
ENSSARG00000007274	NCBP1	86	71.706	ENSXMAG00000018253	NCBP1	85	70.842	Xiphophorus_maculatus