EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSARG00000007506 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Plus strand
Length
53320 bases
Position
chrGeneScaffold_2940:14531-67850
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000006810tRNA_anti-codonPF01336.256.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000007514RPA1-2011815-ENSSARP00000006810604 (aa)-UPI0001581712
Gene Model
Click here to download ENSSARG00000007506's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000007506's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000007506RPA18772.727ENSAPOG00000011658rpa18872.727Acanthochromis_polyacanthus
ENSSARG00000007506RPA18056.842ENSAPOG00000019409RPA17257.925Acanthochromis_polyacanthus
ENSSARG00000007506RPA110070.462ENSAMEG00000007706RPA18785.294Ailuropoda_melanoleuca
ENSSARG00000007506RPA18156.735ENSACIG00000007277rpa18656.735Amphilophus_citrinellus
ENSSARG00000007506RPA19748.557ENSACIG00000012881RPA19948.557Amphilophus_citrinellus
ENSSARG00000007506RPA18971.875ENSAOCG00000023376rpa18771.875Amphiprion_ocellaris
ENSSARG00000007506RPA18250.940ENSAOCG00000009003RPA18251.504Amphiprion_ocellaris
ENSSARG00000007506RPA18249.726ENSAPEG00000019132RPA18250.091Amphiprion_percula
ENSSARG00000007506RPA18971.875ENSAPEG00000008634rpa18871.875Amphiprion_percula
ENSSARG00000007506RPA18672.727ENSATEG00000022024rpa18872.727Anabas_testudineus
ENSSARG00000007506RPA18763.636ENSATEG00000006443RPA18763.636Anabas_testudineus
ENSSARG00000007506RPA18189.655ENSAPLG00000012442RPA17289.655Anas_platyrhynchos
ENSSARG00000007506RPA19952.389ENSACAG00000014490RPA19853.048Anolis_carolinensis
ENSSARG00000007506RPA18985.294ENSANAG00000023456RPA18985.294Aotus_nancymaae
ENSSARG00000007506RPA18478.788ENSACLG00000006640rpa18878.788Astatotilapia_calliptera
ENSSARG00000007506RPA19847.826ENSACLG00000005223RPA19747.826Astatotilapia_calliptera
ENSSARG00000007506RPA18969.697ENSAMXG00000008418rpa18769.697Astyanax_mexicanus
ENSSARG00000007506RPA18982.353ENSBTAG00000009711RPA19382.353Bos_taurus
ENSSARG00000007506RPA18985.294ENSCJAG00000001848RPA18885.294Callithrix_jacchus
ENSSARG00000007506RPA110070.083ENSCAFG00000019249RPA18885.294Canis_familiaris
ENSSARG00000007506RPA110070.083ENSCAFG00020009847RPA18885.294Canis_lupus_dingo
ENSSARG00000007506RPA110069.917ENSCHIG00000026308RPA19870.579Capra_hircus
ENSSARG00000007506RPA110069.967ENSTSYG00000003482-8882.353Carlito_syrichta
ENSSARG00000007506RPA110068.760ENSCPOG00000000035RPA19868.760Cavia_porcellus
ENSSARG00000007506RPA17285.786ENSCCAG00000010981RPA17885.786Cebus_capucinus
ENSSARG00000007506RPA19969.536ENSCLAG00000005185-9869.536Chinchilla_lanigera
ENSSARG00000007506RPA110066.281ENSCLAG00000015045-9866.281Chinchilla_lanigera
ENSSARG00000007506RPA17284.577ENSCSAG00000013833RPA17884.577Chlorocebus_sabaeus
ENSSARG00000007506RPA17366.515ENSCHOG00000009454-10066.515Choloepus_hoffmanni
ENSSARG00000007506RPA19766.497ENSCHOG00000013540-10066.497Choloepus_hoffmanni
ENSSARG00000007506RPA18978.125ENSCPBG00000020377RPA18778.125Chrysemys_picta_bellii
ENSSARG00000007506RPA18338.552ENSCING00000023482-8138.402Ciona_intestinalis
ENSSARG00000007506RPA110067.053ENSCANG00000030911RPA18982.353Colobus_angolensis_palliatus
ENSSARG00000007506RPA19968.534ENSCGRG00001008197Rpa19868.534Cricetulus_griseus_chok1gshd
ENSSARG00000007506RPA18363.905ENSCGRG00000000582Rpa19963.905Cricetulus_griseus_crigri
ENSSARG00000007506RPA19842.741ENSCSEG00000012726RPA18566.667Cynoglossus_semilaevis
ENSSARG00000007506RPA19949.917ENSCSEG00000013066rpa19849.917Cynoglossus_semilaevis
ENSSARG00000007506RPA18248.375ENSCVAG00000013446-8248.375Cyprinodon_variegatus
ENSSARG00000007506RPA18778.788ENSCVAG00000019431rpa18878.788Cyprinodon_variegatus
ENSSARG00000007506RPA18972.727ENSDARG00000003938rpa18772.727Danio_rerio
ENSSARG00000007506RPA19970.315ENSDNOG00000017218RPA19870.315Dasypus_novemcinctus
ENSSARG00000007506RPA110070.579ENSDORG00000006199Rpa19870.579Dipodomys_ordii
ENSSARG00000007506RPA18439.726FBgn0010173RpA-708140.078Drosophila_melanogaster
ENSSARG00000007506RPA17281.390ENSETEG00000017608RPA17081.390Echinops_telfairi
ENSSARG00000007506RPA18982.353ENSEASG00005009372RPA18787.097Equus_asinus_asinus
ENSSARG00000007506RPA110070.413ENSECAG00000023886RPA18882.353Equus_caballus
ENSSARG00000007506RPA17067.619ENSEEUG00000002186-6867.619Erinaceus_europaeus
ENSSARG00000007506RPA19851.092ENSELUG00000021071rpa19651.092Esox_lucius
ENSSARG00000007506RPA17871.875ENSELUG00000006136RPA18671.875Esox_lucius
ENSSARG00000007506RPA110069.637ENSFCAG00000006306RPA19869.637Felis_catus
ENSSARG00000007506RPA18985.294ENSFALG00000006575RPA18785.294Ficedula_albicollis
ENSSARG00000007506RPA19969.652ENSFDAG00000007720RPA19869.652Fukomys_damarensis
ENSSARG00000007506RPA18775.758ENSFHEG00000003580rpa18675.758Fundulus_heteroclitus
ENSSARG00000007506RPA19847.966ENSGMOG00000010382rpa19647.966Gadus_morhua
ENSSARG00000007506RPA18985.294ENSGALG00000003072RPA18785.294Gallus_gallus
ENSSARG00000007506RPA18449.639ENSGAFG00000020953RPA18849.728Gambusia_affinis
ENSSARG00000007506RPA19850.761ENSGAFG00000012916rpa18678.788Gambusia_affinis
ENSSARG00000007506RPA19948.007ENSGACG00000010856rpa18775.758Gasterosteus_aculeatus
ENSSARG00000007506RPA18978.125ENSGAGG00000013611RPA18778.125Gopherus_agassizii
ENSSARG00000007506RPA18982.353ENSGGOG00000014186RPA18782.353Gorilla_gorilla
ENSSARG00000007506RPA18765.625ENSHBUG00000009348RPA19065.625Haplochromis_burtoni
ENSSARG00000007506RPA18778.788ENSHBUG00000017773rpa18578.788Haplochromis_burtoni
ENSSARG00000007506RPA19968.988ENSHGLG00000008846RPA19869.320Heterocephalus_glaber_female
ENSSARG00000007506RPA19968.988ENSHGLG00100017755-9869.320Heterocephalus_glaber_male
ENSSARG00000007506RPA110064.628ENSHGLG00100000799-9864.628Heterocephalus_glaber_male
ENSSARG00000007506RPA18367.921ENSHGLG00100002005-8468.317Heterocephalus_glaber_male
ENSSARG00000007506RPA18342.262ENSHCOG00000000351RPA18042.262Hippocampus_comes
ENSSARG00000007506RPA19749.069ENSHCOG00000001401rpa19649.917Hippocampus_comes
ENSSARG00000007506RPA18869.697ENSIPUG00000004400rpa18769.697Ictalurus_punctatus
ENSSARG00000007506RPA18983.871ENSSTOG00000022475RPA18883.871Ictidomys_tridecemlineatus
ENSSARG00000007506RPA18682.353ENSJJAG00000000876Rpa18782.353Jaculus_jaculus
ENSSARG00000007506RPA19849.241ENSKMAG00000005605rpa19649.580Kryptolebias_marmoratus
ENSSARG00000007506RPA19845.652ENSKMAG00000000234RPA19645.652Kryptolebias_marmoratus
ENSSARG00000007506RPA18258.017ENSLBEG00000002281RPA17658.017Labrus_bergylta
ENSSARG00000007506RPA19848.731ENSLBEG00000021604rpa18666.667Labrus_bergylta
ENSSARG00000007506RPA17266.667ENSLACG00000007210RPA18666.667Latimeria_chalumnae
ENSSARG00000007506RPA18772.727ENSLOCG00000006397rpa18572.727Lepisosteus_oculatus
ENSSARG00000007506RPA19969.935ENSLAFG00000015354RPA19869.935Loxodonta_africana
ENSSARG00000007506RPA18479.051ENSMFAG00000036138-10079.051Macaca_fascicularis
ENSSARG00000007506RPA18982.353ENSMMUG00000011604-9282.353Macaca_mulatta
ENSSARG00000007506RPA18976.471ENSMMUG00000002442-8776.471Macaca_mulatta
ENSSARG00000007506RPA18782.353ENSMNEG00000031632-8882.353Macaca_nemestrina
ENSSARG00000007506RPA18976.471ENSMNEG00000029837-8676.471Macaca_nemestrina
ENSSARG00000007506RPA18982.353ENSMLEG00000038768-8982.353Mandrillus_leucophaeus
ENSSARG00000007506RPA18775.758ENSMAMG00000017993rpa18875.758Mastacembelus_armatus
ENSSARG00000007506RPA18265.625ENSMAMG00000020097RPA18765.625Mastacembelus_armatus
ENSSARG00000007506RPA19847.826ENSMZEG00005024731RPA19747.826Maylandia_zebra
ENSSARG00000007506RPA18978.788ENSMZEG00005007551rpa18778.788Maylandia_zebra
ENSSARG00000007506RPA18985.294ENSMGAG00000005315RPA18785.294Meleagris_gallopavo
ENSSARG00000007506RPA19968.333ENSMAUG00000010474Rpa19969.052Mesocricetus_auratus
ENSSARG00000007506RPA18982.353ENSMICG00000012867RPA18882.353Microcebus_murinus
ENSSARG00000007506RPA19967.887ENSMOCG00000013019Rpa19867.887Microtus_ochrogaster
ENSSARG00000007506RPA18778.788ENSMMOG00000014292rpa18878.788Mola_mola
ENSSARG00000007506RPA19946.823ENSMMOG00000010868RPA19751.923Mola_mola
ENSSARG00000007506RPA19966.169ENSMODG00000010549RPA19866.169Monodelphis_domestica
ENSSARG00000007506RPA18563.636ENSMALG00000001208RPA17063.636Monopterus_albus
ENSSARG00000007506RPA18772.727ENSMALG00000011453rpa18572.727Monopterus_albus
ENSSARG00000007506RPA19968.264MGP_CAROLIEiJ_G0016734Rpa19868.264Mus_caroli
ENSSARG00000007506RPA19966.557ENSMUSG00000000751Rpa18883.871Mus_musculus
ENSSARG00000007506RPA19968.586MGP_PahariEiJ_G0017871Rpa19868.586Mus_pahari
ENSSARG00000007506RPA19966.448MGP_SPRETEiJ_G0017577Rpa18883.871Mus_spretus
ENSSARG00000007506RPA110070.413ENSMPUG00000013119RPA19870.413Mustela_putorius_furo
ENSSARG00000007506RPA19969.616ENSMLUG00000006113RPA19669.616Myotis_lucifugus
ENSSARG00000007506RPA19767.572ENSNGAG00000004522Rpa18476.471Nannospalax_galili
ENSSARG00000007506RPA18578.788ENSNBRG00000020595rpa18878.788Neolamprologus_brichardi
ENSSARG00000007506RPA18765.625ENSNBRG00000009672RPA18665.625Neolamprologus_brichardi
ENSSARG00000007506RPA18982.353ENSNLEG00000017149RPA18882.353Nomascus_leucogenys
ENSSARG00000007506RPA17279.412ENSMEUG00000006714RPA17179.412Notamacropus_eugenii
ENSSARG00000007506RPA19767.337ENSODEG00000009038RPA19667.337Octodon_degus
ENSSARG00000007506RPA18978.788ENSONIG00000013135rpa18778.788Oreochromis_niloticus
ENSSARG00000007506RPA19966.169ENSOANG00000010880RPA19966.169Ornithorhynchus_anatinus
ENSSARG00000007506RPA110067.559ENSOCUG00000001504RPA19867.559Oryctolagus_cuniculus
ENSSARG00000007506RPA18354.871ENSORLG00000004856rpa18765.625Oryzias_latipes
ENSSARG00000007506RPA18771.875ENSORLG00000003368RPA18771.875Oryzias_latipes
ENSSARG00000007506RPA18771.875ENSORLG00020015284RPA18771.875Oryzias_latipes_hni
ENSSARG00000007506RPA18354.871ENSORLG00020008980rpa18765.625Oryzias_latipes_hni
ENSSARG00000007506RPA18354.871ENSORLG00015013982rpa18765.625Oryzias_latipes_hsok
ENSSARG00000007506RPA15856.447ENSORLG00015005867-7956.447Oryzias_latipes_hsok
ENSSARG00000007506RPA18771.875ENSORLG00015020383RPA18671.875Oryzias_latipes_hsok
ENSSARG00000007506RPA18571.875ENSOMEG00000011040RPA19171.875Oryzias_melastigma
ENSSARG00000007506RPA19948.000ENSOMEG00000004704rpa19848.000Oryzias_melastigma
ENSSARG00000007506RPA16191.525ENSOGAG00000029379-7891.525Otolemur_garnettii
ENSSARG00000007506RPA18987.500ENSOGAG00000005581-9087.500Otolemur_garnettii
ENSSARG00000007506RPA110069.917ENSOARG00000014479RPA19870.579Ovis_aries
ENSSARG00000007506RPA18982.353ENSPPAG00000039680RPA18882.353Pan_paniscus
ENSSARG00000007506RPA110070.132ENSPPRG00000011807RPA19870.132Panthera_pardus
ENSSARG00000007506RPA110069.802ENSPTIG00000007898RPA19869.802Panthera_tigris_altaica
ENSSARG00000007506RPA18982.353ENSPTRG00000008539RPA18882.353Pan_troglodytes
ENSSARG00000007506RPA18982.353ENSPANG00000024592RPA18882.353Papio_anubis
ENSSARG00000007506RPA18353.968ENSPKIG00000008053rpa18154.960Paramormyrops_kingsleyae
ENSSARG00000007506RPA18884.375ENSPSIG00000015617RPA18884.375Pelodiscus_sinensis
ENSSARG00000007506RPA18050.311ENSPMGG00000000543RPA18251.374Periophthalmus_magnuspinnatus
ENSSARG00000007506RPA19948.671ENSPMGG00000011589rpa19948.671Periophthalmus_magnuspinnatus
ENSSARG00000007506RPA19969.269ENSPEMG00000021061Rpa19869.269Peromyscus_maniculatus_bairdii
ENSSARG00000007506RPA19964.628ENSPCIG00000019049RPA18776.471Phascolarctos_cinereus
ENSSARG00000007506RPA18778.788ENSPFOG00000003987rpa18678.788Poecilia_formosa
ENSSARG00000007506RPA18250.375ENSPLAG00000008844-8350.375Poecilia_latipinna
ENSSARG00000007506RPA18778.788ENSPLAG00000004984rpa18678.788Poecilia_latipinna
ENSSARG00000007506RPA18778.788ENSPMEG00000020602rpa18878.788Poecilia_mexicana
ENSSARG00000007506RPA18250.280ENSPMEG00000003627-8350.654Poecilia_mexicana
ENSSARG00000007506RPA17358.309ENSPREG00000010119RPA18765.625Poecilia_reticulata
ENSSARG00000007506RPA18352.883ENSPREG00000010174rpa18352.894Poecilia_reticulata
ENSSARG00000007506RPA18982.353ENSPCOG00000001799RPA18882.353Propithecus_coquereli
ENSSARG00000007506RPA18979.644ENSPVAG00000002149RPA18879.644Pteropus_vampyrus
ENSSARG00000007506RPA19847.504ENSPNYG00000024165RPA19747.504Pundamilia_nyererei
ENSSARG00000007506RPA18778.788ENSPNYG00000016316rpa18878.788Pundamilia_nyererei
ENSSARG00000007506RPA17266.667ENSPNAG00000008599rpa17066.667Pygocentrus_nattereri
ENSSARG00000007506RPA18196.610ENSRNOG00000003123Rpa17296.610Rattus_norvegicus
ENSSARG00000007506RPA18982.353ENSRBIG00000036587RPA18882.353Rhinopithecus_bieti
ENSSARG00000007506RPA18982.353ENSRROG00000043278RPA19382.353Rhinopithecus_roxellana
ENSSARG00000007506RPA18985.294ENSSBOG00000030233RPA18985.294Saimiri_boliviensis_boliviensis
ENSSARG00000007506RPA19966.116ENSSHAG00000007969RPA19766.612Sarcophilus_harrisii
ENSSARG00000007506RPA18975.758ENSSFOG00015005362rpa18075.758Scleropages_formosus
ENSSARG00000007506RPA18869.697ENSSMAG00000019746RPA18869.697Scophthalmus_maximus
ENSSARG00000007506RPA17763.636ENSSDUG00000016358RPA17363.636Seriola_dumerili
ENSSARG00000007506RPA18772.727ENSSDUG00000011949rpa19651.607Seriola_dumerili
ENSSARG00000007506RPA17866.667ENSSLDG00000020784RPA17766.667Seriola_lalandi_dorsalis
ENSSARG00000007506RPA18772.727ENSSLDG00000011806rpa18672.727Seriola_lalandi_dorsalis
ENSSARG00000007506RPA18866.667ENSSPUG00000007223RPA18866.667Sphenodon_punctatus
ENSSARG00000007506RPA18772.727ENSSPAG00000009903rpa18672.727Stegastes_partitus
ENSSARG00000007506RPA18253.333ENSSPAG00000011165RPA18152.929Stegastes_partitus
ENSSARG00000007506RPA19970.149ENSSSCG00000017822RPA110070.813Sus_scrofa
ENSSARG00000007506RPA18985.294ENSTGUG00000005775RPA18785.294Taeniopygia_guttata
ENSSARG00000007506RPA17256.587ENSTRUG00000000405RPA16851.407Takifugu_rubripes
ENSSARG00000007506RPA19750.850ENSTRUG00000003616rpa19650.850Takifugu_rubripes
ENSSARG00000007506RPA18972.727ENSTNIG00000016199rpa18772.727Tetraodon_nigroviridis
ENSSARG00000007506RPA18097.674ENSTBEG00000002709RPA18197.674Tupaia_belangeri
ENSSARG00000007506RPA19969.371ENSTTRG00000001169RPA19870.364Tursiops_truncatus
ENSSARG00000007506RPA18494.118ENSUAMG00000015676RPA19194.118Ursus_americanus
ENSSARG00000007506RPA110069.091ENSUMAG00000009328RPA19870.248Ursus_maritimus
ENSSARG00000007506RPA110068.595ENSVPAG00000009443RPA19868.595Vicugna_pacos
ENSSARG00000007506RPA110070.248ENSVVUG00000021715RPA19870.248Vulpes_vulpes
ENSSARG00000007506RPA19959.437ENSXETG00000013538rpa18678.788Xenopus_tropicalis
ENSSARG00000007506RPA18150.103ENSXCOG00000009899-8250.103Xiphophorus_couchianus
ENSSARG00000007506RPA18353.877ENSXCOG00000010068rpa18254.918Xiphophorus_couchianus
ENSSARG00000007506RPA19949.085ENSXMAG00000004102rpa19949.825Xiphophorus_maculatus
ENSSARG00000007506RPA17358.309ENSXMAG00000010333RPA16858.309Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us