EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000007565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: MGC45806
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 904 bases
Position: chrGeneScaffold_6162:56895-57798
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000006843	MMR_HSR1	PF01926.23	5.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000007552	-	591	-	ENSSARP00000006843	197 (aa)	-	UPI0001581A01

Gene Model

Click here to download ENSSARG00000007565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000007565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000007565	-	93	33.333	ENSSARG00000011723	RAB33A	81	33.333
ENSSARG00000007565	-	70	33.577	ENSSARG00000007956	KRAS	94	33.577
ENSSARG00000007565	-	82	37.427	ENSSARG00000006891	RAB9B	83	37.427
ENSSARG00000007565	-	77	38.509	ENSSARG00000006352	RAB9A	79	38.509
ENSSARG00000007565	-	63	40.769	ENSSARG00000010854	RAB25	99	40.769
ENSSARG00000007565	-	80	31.176	ENSSARG00000000017	RASL11B	68	31.176
ENSSARG00000007565	-	83	37.870	ENSSARG00000013689	RAB23	70	37.870
ENSSARG00000007565	-	81	33.537	ENSSARG00000006237	RAB5B	75	33.537
ENSSARG00000007565	-	81	39.645	ENSSARG00000007843	RAB33B	73	39.645
ENSSARG00000007565	-	74	31.210	ENSSARG00000011269	RASL11A	64	31.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000007565	-	100	80.288	ENSANAG00000035487	-	96	80.288	Aotus_nancymaae
ENSSARG00000007565	-	100	77.358	ENSBTAG00000021525	-	96	77.358	Bos_taurus
ENSSARG00000007565	-	100	61.165	ENSCPBG00000011245	RAB42	99	60.976	Chrysemys_picta_bellii
ENSSARG00000007565	-	100	73.684	ENSCGRG00001019426	Rab42	96	73.684	Cricetulus_griseus_chok1gshd
ENSSARG00000007565	-	100	77.885	ENSDORG00000023607	Rab42	96	77.885	Dipodomys_ordii
ENSSARG00000007565	-	100	80.476	ENSFCAG00000037124	-	96	80.476	Felis_catus
ENSSARG00000007565	-	100	60.680	ENSGAGG00000004921	RAB42	99	60.680	Gopherus_agassizii
ENSSARG00000007565	-	100	78.469	ENSSTOG00000000084	-	96	78.469	Ictidomys_tridecemlineatus
ENSSARG00000007565	-	100	74.163	ENSMAUG00000020223	Rab42	96	74.163	Mesocricetus_auratus
ENSSARG00000007565	-	100	78.571	ENSMICG00000029915	-	96	80.952	Microcebus_murinus
ENSSARG00000007565	-	100	75.962	ENSMOCG00000021639	Rab42	96	75.962	Microtus_ochrogaster
ENSSARG00000007565	-	100	65.700	ENSMODG00000023873	-	95	65.700	Monodelphis_domestica
ENSSARG00000007565	-	100	75.238	ENSNGAG00000015676	Rab42	96	75.238	Nannospalax_galili
ENSSARG00000007565	-	100	80.952	ENSOGAG00000006951	-	96	81.429	Otolemur_garnettii
ENSSARG00000007565	-	100	61.650	ENSPSIG00000006831	RAB42	92	61.650	Pelodiscus_sinensis
ENSSARG00000007565	-	100	80.952	ENSPCOG00000008605	-	96	80.952	Propithecus_coquereli
ENSSARG00000007565	-	99	60.194	ENSSPUG00000010337	RAB42	96	60.194	Sphenodon_punctatus
ENSSARG00000007565	-	100	82.464	ENSSSCG00000030432	-	96	82.464	Sus_scrofa