EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000007741 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 40784 bases
Position: chrGeneScaffold_1981:550-41333
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000007041	XRN_N	PF03159.18	3.5e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000007774	-	4074	-	ENSSARP00000007041	1358 (aa)	-	UPI0001580BB4

Gene Model

Click here to download ENSSARG00000007741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000007741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000007741	-	83	84.917	ENSG00000114127	XRN1	100	96.970	Homo_sapiens
ENSSARG00000007741	-	75	67.975	ENSAPOG00000000622	xrn1	94	76.008	Acanthochromis_polyacanthus
ENSSARG00000007741	-	81	85.315	ENSAMEG00000012538	XRN1	65	85.315	Ailuropoda_melanoleuca
ENSSARG00000007741	-	75	67.593	ENSACIG00000001057	xrn1	64	67.795	Amphilophus_citrinellus
ENSSARG00000007741	-	75	67.665	ENSAOCG00000014097	xrn1	95	69.495	Amphiprion_ocellaris
ENSSARG00000007741	-	75	67.562	ENSAPEG00000006620	xrn1	66	67.562	Amphiprion_percula
ENSSARG00000007741	-	75	66.117	ENSATEG00000009752	xrn1	66	66.117	Anabas_testudineus
ENSSARG00000007741	-	82	78.157	ENSAPLG00000004905	XRN1	67	78.157	Anas_platyrhynchos
ENSSARG00000007741	-	82	75.748	ENSACAG00000004985	XRN1	64	75.748	Anolis_carolinensis
ENSSARG00000007741	-	83	85.227	ENSANAG00000029013	XRN1	85	85.124	Aotus_nancymaae
ENSSARG00000007741	-	75	67.078	ENSACLG00000004806	xrn1	61	67.078	Astatotilapia_calliptera
ENSSARG00000007741	-	81	65.773	ENSAMXG00000019370	xrn1	95	71.579	Astyanax_mexicanus
ENSSARG00000007741	-	83	84.607	ENSBTAG00000011524	XRN1	68	84.607	Bos_taurus
ENSSARG00000007741	-	83	84.917	ENSCJAG00000001872	XRN1	70	84.917	Callithrix_jacchus
ENSSARG00000007741	-	83	84.265	ENSCAFG00000007783	XRN1	67	84.265	Canis_familiaris
ENSSARG00000007741	-	81	85.434	ENSCAFG00020009120	XRN1	89	88.797	Canis_lupus_dingo
ENSSARG00000007741	-	81	84.917	ENSCHIG00000019192	XRN1	66	84.917	Capra_hircus
ENSSARG00000007741	-	83	84.917	ENSTSYG00000002705	XRN1	68	84.917	Carlito_syrichta
ENSSARG00000007741	-	63	73.267	ENSCAPG00000004604	-	91	73.267	Cavia_aperea
ENSSARG00000007741	-	83	85.331	ENSCCAG00000034800	XRN1	89	92.881	Cebus_capucinus
ENSSARG00000007741	-	83	85.537	ENSCATG00000041794	XRN1	68	85.537	Cercocebus_atys
ENSSARG00000007741	-	81	84.607	ENSCLAG00000001451	XRN1	89	92.053	Chinchilla_lanigera
ENSSARG00000007741	-	83	85.434	ENSCSAG00000011265	XRN1	67	85.434	Chlorocebus_sabaeus
ENSSARG00000007741	-	71	46.524	ENSCSAVG00000008584	-	74	46.497	Ciona_savignyi
ENSSARG00000007741	-	83	85.640	ENSCANG00000037495	XRN1	89	92.881	Colobus_angolensis_palliatus
ENSSARG00000007741	-	81	83.781	ENSCGRG00001019411	Xrn1	89	91.556	Cricetulus_griseus_chok1gshd
ENSSARG00000007741	-	81	83.781	ENSCGRG00000012464	Xrn1	89	91.556	Cricetulus_griseus_crigri
ENSSARG00000007741	-	75	67.147	ENSCSEG00000021285	xrn1	96	76.596	Cynoglossus_semilaevis
ENSSARG00000007741	-	71	67.079	ENSCVAG00000013089	xrn1	84	67.183	Cyprinodon_variegatus
ENSSARG00000007741	-	82	69.175	ENSDARG00000091652	xrn1	98	79.493	Danio_rerio
ENSSARG00000007741	-	83	84.504	ENSDORG00000013833	Xrn1	69	84.504	Dipodomys_ordii
ENSSARG00000007741	-	71	40.164	FBgn0020261	pcm	58	40.061	Drosophila_melanogaster
ENSSARG00000007741	-	70	93.878	ENSETEG00000003978	XRN1	58	93.878	Echinops_telfairi
ENSSARG00000007741	-	83	85.227	ENSEASG00005002687	XRN1	89	92.384	Equus_asinus_asinus
ENSSARG00000007741	-	83	85.227	ENSECAG00000008301	XRN1	67	85.227	Equus_caballus
ENSSARG00000007741	-	77	84.866	ENSEEUG00000011323	XRN1	63	84.866	Erinaceus_europaeus
ENSSARG00000007741	-	75	68.356	ENSELUG00000000169	xrn1	60	68.252	Esox_lucius
ENSSARG00000007741	-	83	77.766	ENSFCAG00000027589	XRN1	94	91.647	Felis_catus
ENSSARG00000007741	-	81	77.640	ENSFALG00000007021	XRN1	64	77.640	Ficedula_albicollis
ENSSARG00000007741	-	81	84.401	ENSFDAG00000020494	XRN1	89	91.391	Fukomys_damarensis
ENSSARG00000007741	-	75	64.219	ENSGMOG00000006396	xrn1	60	64.840	Gadus_morhua
ENSSARG00000007741	-	83	78.283	ENSGALG00000002706	XRN1	67	78.283	Gallus_gallus
ENSSARG00000007741	-	75	66.254	ENSGACG00000014328	xrn1	60	66.018	Gasterosteus_aculeatus
ENSSARG00000007741	-	82	77.893	ENSGAGG00000017535	XRN1	69	77.893	Gopherus_agassizii
ENSSARG00000007741	-	83	84.917	ENSGGOG00000008047	XRN1	68	84.917	Gorilla_gorilla
ENSSARG00000007741	-	75	65.638	ENSHBUG00000005908	xrn1	98	73.306	Haplochromis_burtoni
ENSSARG00000007741	-	81	85.021	ENSHGLG00000014476	XRN1	89	92.053	Heterocephalus_glaber_female
ENSSARG00000007741	-	81	85.021	ENSHGLG00100015130	XRN1	89	92.053	Heterocephalus_glaber_male
ENSSARG00000007741	-	75	67.146	ENSHCOG00000014062	xrn1	65	67.146	Hippocampus_comes
ENSSARG00000007741	-	75	68.421	ENSIPUG00000015229	xrn1	62	68.421	Ictalurus_punctatus
ENSSARG00000007741	-	81	85.847	ENSSTOG00000013552	XRN1	89	92.715	Ictidomys_tridecemlineatus
ENSSARG00000007741	-	81	83.971	ENSJJAG00000010863	Xrn1	91	90.000	Jaculus_jaculus
ENSSARG00000007741	-	75	64.979	ENSKMAG00000021356	xrn1	94	75.687	Kryptolebias_marmoratus
ENSSARG00000007741	-	75	67.149	ENSLBEG00000018656	xrn1	91	76.759	Labrus_bergylta
ENSSARG00000007741	-	81	73.423	ENSLACG00000009020	XRN1	65	73.423	Latimeria_chalumnae
ENSSARG00000007741	-	75	71.370	ENSLOCG00000007944	xrn1	60	71.370	Lepisosteus_oculatus
ENSSARG00000007741	-	71	84.814	ENSLAFG00000015426	XRN1	91	84.814	Loxodonta_africana
ENSSARG00000007741	-	83	85.434	ENSMFAG00000032599	XRN1	68	85.434	Macaca_fascicularis
ENSSARG00000007741	-	83	85.537	ENSMMUG00000014038	XRN1	68	85.537	Macaca_mulatta
ENSSARG00000007741	-	83	85.331	ENSMNEG00000034217	XRN1	68	85.331	Macaca_nemestrina
ENSSARG00000007741	-	75	67.183	ENSMAMG00000013219	xrn1	94	76.082	Mastacembelus_armatus
ENSSARG00000007741	-	75	67.078	ENSMZEG00005015099	xrn1	61	67.078	Maylandia_zebra
ENSSARG00000007741	-	82	75.801	ENSMGAG00000006333	XRN1	67	75.801	Meleagris_gallopavo
ENSSARG00000007741	-	83	85.021	ENSMICG00000048948	XRN1	73	92.308	Microcebus_murinus
ENSSARG00000007741	-	63	91.060	ENSMOCG00000008665	Xrn1	89	91.060	Microtus_ochrogaster
ENSSARG00000007741	-	82	87.179	ENSMODG00000021236	XRN1	66	80.352	Monodelphis_domestica
ENSSARG00000007741	-	75	63.131	ENSMALG00000004098	xrn1	61	63.440	Monopterus_albus
ENSSARG00000007741	-	73	91.500	MGP_CAROLIEiJ_G0032535	Xrn1	100	97.500	Mus_caroli
ENSSARG00000007741	-	81	82.955	ENSMUSG00000032410	Xrn1	100	97.500	Mus_musculus
ENSSARG00000007741	-	81	82.420	MGP_PahariEiJ_G0015404	Xrn1	100	97.500	Mus_pahari
ENSSARG00000007741	-	81	82.955	MGP_SPRETEiJ_G0033678	Xrn1	100	97.500	Mus_spretus
ENSSARG00000007741	-	83	85.212	ENSMPUG00000012040	XRN1	67	85.212	Mustela_putorius_furo
ENSSARG00000007741	-	81	83.781	ENSMLUG00000016885	XRN1	65	83.781	Myotis_lucifugus
ENSSARG00000007741	-	63	87.894	ENSNGAG00000023964	Xrn1	89	87.894	Nannospalax_galili
ENSSARG00000007741	-	83	85.227	ENSNLEG00000004726	XRN1	68	85.227	Nomascus_leucogenys
ENSSARG00000007741	-	61	86.957	ENSOPRG00000007337	-	50	86.957	Ochotona_princeps
ENSSARG00000007741	-	75	67.765	ENSONIG00000016673	xrn1	68	67.765	Oreochromis_niloticus
ENSSARG00000007741	-	73	77.363	ENSOANG00000006735	XRN1	65	77.363	Ornithorhynchus_anatinus
ENSSARG00000007741	-	82	85.315	ENSOCUG00000001861	XRN1	65	85.315	Oryctolagus_cuniculus
ENSSARG00000007741	-	75	68.557	ENSORLG00000013005	xrn1	62	68.705	Oryzias_latipes
ENSSARG00000007741	-	75	68.454	ENSORLG00020005559	xrn1	63	68.454	Oryzias_latipes_hni
ENSSARG00000007741	-	75	68.144	ENSORLG00015022523	xrn1	65	68.144	Oryzias_latipes_hsok
ENSSARG00000007741	-	75	67.769	ENSOMEG00000015397	xrn1	66	67.938	Oryzias_melastigma
ENSSARG00000007741	-	83	81.405	ENSOGAG00000000170	XRN1	67	81.405	Otolemur_garnettii
ENSSARG00000007741	-	83	85.021	ENSOARG00000006343	XRN1	68	85.021	Ovis_aries
ENSSARG00000007741	-	83	85.021	ENSPPAG00000010180	XRN1	68	85.021	Pan_paniscus
ENSSARG00000007741	-	83	84.727	ENSPPRG00000007125	XRN1	68	84.727	Panthera_pardus
ENSSARG00000007741	-	83	84.830	ENSPTIG00000021081	XRN1	68	84.830	Panthera_tigris_altaica
ENSSARG00000007741	-	83	85.021	ENSPTRG00000015482	XRN1	68	85.021	Pan_troglodytes
ENSSARG00000007741	-	83	85.537	ENSPANG00000010638	XRN1	68	85.537	Papio_anubis
ENSSARG00000007741	-	82	77.938	ENSPSIG00000018050	XRN1	65	77.938	Pelodiscus_sinensis
ENSSARG00000007741	-	63	75.777	ENSPMGG00000002648	xrn1	89	76.923	Periophthalmus_magnuspinnatus
ENSSARG00000007741	-	63	91.722	ENSPEMG00000020610	Xrn1	89	91.722	Peromyscus_maniculatus_bairdii
ENSSARG00000007741	-	71	45.793	ENSPMAG00000002975	xrn1	79	77.233	Petromyzon_marinus
ENSSARG00000007741	-	83	80.558	ENSPCIG00000028735	XRN1	89	87.065	Phascolarctos_cinereus
ENSSARG00000007741	-	75	67.179	ENSPFOG00000013932	xrn1	67	67.179	Poecilia_formosa
ENSSARG00000007741	-	75	67.320	ENSPLAG00000021653	xrn1	66	67.526	Poecilia_latipinna
ENSSARG00000007741	-	75	67.181	ENSPMEG00000003076	xrn1	65	67.181	Poecilia_mexicana
ENSSARG00000007741	-	75	66.838	ENSPREG00000021147	xrn1	63	65.195	Poecilia_reticulata
ENSSARG00000007741	-	83	85.124	ENSPPYG00000014172	XRN1	67	85.124	Pongo_abelii
ENSSARG00000007741	-	83	79.214	ENSPCAG00000005638	XRN1	74	79.214	Procavia_capensis
ENSSARG00000007741	-	83	84.607	ENSPCOG00000013089	XRN1	89	91.556	Propithecus_coquereli
ENSSARG00000007741	-	79	79.938	ENSPVAG00000016265	XRN1	63	79.938	Pteropus_vampyrus
ENSSARG00000007741	-	75	67.181	ENSPNYG00000010570	xrn1	62	66.735	Pundamilia_nyererei
ENSSARG00000007741	-	75	64.592	ENSPNAG00000023531	xrn1	66	63.673	Pygocentrus_nattereri
ENSSARG00000007741	-	81	82.955	ENSRNOG00000042951	Xrn1	65	82.955	Rattus_norvegicus
ENSSARG00000007741	-	83	85.227	ENSRBIG00000041227	XRN1	68	85.227	Rhinopithecus_bieti
ENSSARG00000007741	-	71	34.000	YGL173C	XRN1	60	54.678	Saccharomyces_cerevisiae
ENSSARG00000007741	-	83	85.124	ENSSBOG00000029561	XRN1	68	85.124	Saimiri_boliviensis_boliviensis
ENSSARG00000007741	-	82	87.179	ENSSHAG00000016207	XRN1	66	87.179	Sarcophilus_harrisii
ENSSARG00000007741	-	75	68.769	ENSSFOG00015024211	xrn1	63	69.080	Scleropages_formosus
ENSSARG00000007741	-	75	68.074	ENSSMAG00000016534	xrn1	65	68.074	Scophthalmus_maximus
ENSSARG00000007741	-	75	67.662	ENSSDUG00000010306	xrn1	65	67.662	Seriola_dumerili
ENSSARG00000007741	-	75	67.662	ENSSLDG00000021543	xrn1	65	67.559	Seriola_lalandi_dorsalis
ENSSARG00000007741	-	83	77.536	ENSTGUG00000008498	XRN1	68	77.536	Taeniopygia_guttata
ENSSARG00000007741	-	75	66.460	ENSTRUG00000004895	xrn1	96	77.825	Takifugu_rubripes
ENSSARG00000007741	-	75	64.220	ENSTNIG00000017615	xrn1	62	64.184	Tetraodon_nigroviridis
ENSSARG00000007741	-	61	94.220	ENSTBEG00000003256	XRN1	56	83.167	Tupaia_belangeri
ENSSARG00000007741	-	83	83.781	ENSTTRG00000012914	XRN1	67	83.781	Tursiops_truncatus
ENSSARG00000007741	-	83	82.335	ENSUAMG00000001608	XRN1	89	87.417	Ursus_americanus
ENSSARG00000007741	-	83	85.537	ENSUMAG00000013625	XRN1	67	85.537	Ursus_maritimus
ENSSARG00000007741	-	83	85.212	ENSVPAG00000004690	XRN1	68	85.212	Vicugna_pacos
ENSSARG00000007741	-	83	85.537	ENSVVUG00000024461	XRN1	99	91.453	Vulpes_vulpes
ENSSARG00000007741	-	82	73.864	ENSXETG00000000619	xrn1	90	87.896	Xenopus_tropicalis
ENSSARG00000007741	-	75	67.459	ENSXCOG00000007917	xrn1	62	67.252	Xiphophorus_couchianus
ENSSARG00000007741	-	75	66.736	ENSXMAG00000018320	xrn1	64	66.942	Xiphophorus_maculatus