EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000008180 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 10155 bases
Position: chrGeneScaffold_508:18528-28682
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000007399	KH_1	PF00013.29	9.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000008180	SF1-201	1536	-	ENSSARP00000007399	512 (aa)	-	UPI0001581100

Gene Model

Click here to download ENSSARG00000008180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000008180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000008180	SF1	71	77.273	ENSAPOG00000012341	sf1	58	72.356	Acanthochromis_polyacanthus
ENSSARG00000008180	SF1	100	95.551	ENSAMEG00000017828	SF1	80	95.551	Ailuropoda_melanoleuca
ENSSARG00000008180	SF1	71	79.019	ENSACIG00000016514	sf1	61	74.390	Amphilophus_citrinellus
ENSSARG00000008180	SF1	71	77.005	ENSAOCG00000010934	sf1	58	72.356	Amphiprion_ocellaris
ENSSARG00000008180	SF1	71	77.005	ENSAPEG00000009498	sf1	58	72.356	Amphiprion_percula
ENSSARG00000008180	SF1	71	77.273	ENSATEG00000001894	sf1	59	73.366	Anabas_testudineus
ENSSARG00000008180	SF1	100	82.592	ENSANAG00000022607	-	88	86.027	Aotus_nancymaae
ENSSARG00000008180	SF1	100	95.551	ENSANAG00000026664	-	93	94.697	Aotus_nancymaae
ENSSARG00000008180	SF1	71	79.133	ENSACLG00000007633	sf1	60	74.447	Astatotilapia_calliptera
ENSSARG00000008180	SF1	71	81.283	ENSAMXG00000003630	sf1	50	74.817	Astyanax_mexicanus
ENSSARG00000008180	SF1	100	95.745	ENSBTAG00000001035	SF1	81	95.745	Bos_taurus
ENSSARG00000008180	SF1	100	95.745	ENSCJAG00000002780	SF1	81	95.745	Callithrix_jacchus
ENSSARG00000008180	SF1	100	95.745	ENSCAFG00000014239	SF1	81	95.745	Canis_familiaris
ENSSARG00000008180	SF1	100	95.745	ENSCAFG00020014381	SF1	81	95.745	Canis_lupus_dingo
ENSSARG00000008180	SF1	100	95.745	ENSCHIG00000025867	SF1	94	95.745	Capra_hircus
ENSSARG00000008180	SF1	59	93.548	ENSTSYG00000033618	SF1	91	96.667	Carlito_syrichta
ENSSARG00000008180	SF1	84	94.931	ENSCAPG00000010762	SF1	78	94.931	Cavia_aperea
ENSSARG00000008180	SF1	100	95.358	ENSCPOG00000012290	SF1	96	95.358	Cavia_porcellus
ENSSARG00000008180	SF1	100	78.835	ENSCCAG00000023781	-	88	81.069	Cebus_capucinus
ENSSARG00000008180	SF1	100	95.745	ENSCCAG00000037881	SF1	93	94.949	Cebus_capucinus
ENSSARG00000008180	SF1	100	95.745	ENSCATG00000011564	SF1	91	96.923	Cercocebus_atys
ENSSARG00000008180	SF1	100	95.745	ENSCSAG00000007258	SF1	94	95.745	Chlorocebus_sabaeus
ENSSARG00000008180	SF1	75	88.689	ENSCHOG00000006008	SF1	73	88.689	Choloepus_hoffmanni
ENSSARG00000008180	SF1	100	81.431	ENSCPBG00000023763	SF1	66	78.682	Chrysemys_picta_bellii
ENSSARG00000008180	SF1	59	63.898	ENSCING00000005564	-	72	58.889	Ciona_intestinalis
ENSSARG00000008180	SF1	99	51.154	ENSCSAVG00000009055	-	72	62.458	Ciona_savignyi
ENSSARG00000008180	SF1	100	95.745	ENSCANG00000042201	SF1	88	94.565	Colobus_angolensis_palliatus
ENSSARG00000008180	SF1	100	95.164	ENSCGRG00001003677	Sf1	81	95.164	Cricetulus_griseus_chok1gshd
ENSSARG00000008180	SF1	100	95.164	ENSCGRG00000001708	Sf1	95	95.164	Cricetulus_griseus_crigri
ENSSARG00000008180	SF1	76	74.065	ENSCSEG00000014375	sf1	57	72.155	Cynoglossus_semilaevis
ENSSARG00000008180	SF1	71	80.163	ENSCVAG00000001670	sf1	63	75.184	Cyprinodon_variegatus
ENSSARG00000008180	SF1	75	76.531	ENSDARG00000008188	sf1	59	73.923	Danio_rerio
ENSSARG00000008180	SF1	100	95.164	ENSDNOG00000001282	SF1	94	95.164	Dasypus_novemcinctus
ENSSARG00000008180	SF1	100	95.745	ENSDORG00000016334	Sf1	81	95.745	Dipodomys_ordii
ENSSARG00000008180	SF1	100	84.139	ENSETEG00000012830	SF1	72	80.271	Echinops_telfairi
ENSSARG00000008180	SF1	100	95.358	ENSEASG00005018272	SF1	94	95.358	Equus_asinus_asinus
ENSSARG00000008180	SF1	100	95.551	ENSECAG00000024544	SF1	94	95.551	Equus_caballus
ENSSARG00000008180	SF1	76	97.442	ENSEEUG00000001058	SF1	99	97.442	Erinaceus_europaeus
ENSSARG00000008180	SF1	71	76.613	ENSELUG00000013225	sf1	53	73.850	Esox_lucius
ENSSARG00000008180	SF1	100	95.745	ENSFCAG00000012231	SF1	81	95.745	Felis_catus
ENSSARG00000008180	SF1	84	95.392	ENSFDAG00000009833	SF1	78	95.392	Fukomys_damarensis
ENSSARG00000008180	SF1	71	77.249	ENSFHEG00000022656	sf1	59	72.922	Fundulus_heteroclitus
ENSSARG00000008180	SF1	61	83.077	ENSGMOG00000007469	sf1	59	83.077	Gadus_morhua
ENSSARG00000008180	SF1	71	79.625	ENSGAFG00000019284	sf1	76	76.225	Gambusia_affinis
ENSSARG00000008180	SF1	88	83.260	ENSGAGG00000021691	SF1	72	78.682	Gopherus_agassizii
ENSSARG00000008180	SF1	71	78.133	ENSHBUG00000011598	sf1	59	73.861	Haplochromis_burtoni
ENSSARG00000008180	SF1	100	95.745	ENSHGLG00000009541	SF1	81	95.745	Heterocephalus_glaber_female
ENSSARG00000008180	SF1	95	77.362	ENSHGLG00100008255	-	92	79.095	Heterocephalus_glaber_male
ENSSARG00000008180	SF1	95	92.169	ENSHGLG00100013879	-	93	92.169	Heterocephalus_glaber_male
ENSSARG00000008180	SF1	84	83.180	ENSHGLG00100008076	-	87	79.350	Heterocephalus_glaber_male
ENSSARG00000008180	SF1	72	77.165	ENSHCOG00000011388	sf1	58	72.881	Hippocampus_comes
ENSSARG00000008180	SF1	100	95.745	ENSSTOG00000009790	-	82	95.745	Ictidomys_tridecemlineatus
ENSSARG00000008180	SF1	99	82.946	ENSSTOG00000024353	-	77	82.364	Ictidomys_tridecemlineatus
ENSSARG00000008180	SF1	100	95.551	ENSJJAG00000011788	Sf1	81	95.551	Jaculus_jaculus
ENSSARG00000008180	SF1	72	78.796	ENSKMAG00000005854	sf1	61	73.608	Kryptolebias_marmoratus
ENSSARG00000008180	SF1	72	77.690	ENSLBEG00000019836	sf1	63	73.608	Labrus_bergylta
ENSSARG00000008180	SF1	79	74.879	ENSLACG00000018493	SF1	73	74.878	Latimeria_chalumnae
ENSSARG00000008180	SF1	71	79.893	ENSLOCG00000002130	sf1	58	75.062	Lepisosteus_oculatus
ENSSARG00000008180	SF1	100	95.358	ENSLAFG00000007201	SF1	80	95.358	Loxodonta_africana
ENSSARG00000008180	SF1	100	95.745	ENSMFAG00000033122	SF1	90	96.923	Macaca_fascicularis
ENSSARG00000008180	SF1	100	95.745	ENSMMUG00000022606	SF1	99	94.568	Macaca_mulatta
ENSSARG00000008180	SF1	100	95.745	ENSMNEG00000037901	SF1	90	96.923	Macaca_nemestrina
ENSSARG00000008180	SF1	100	95.745	ENSMLEG00000040706	SF1	90	96.923	Mandrillus_leucophaeus
ENSSARG00000008180	SF1	71	78.075	ENSMAMG00000001780	sf1	58	73.366	Mastacembelus_armatus
ENSSARG00000008180	SF1	71	77.867	ENSMZEG00005009196	sf1	59	73.621	Maylandia_zebra
ENSSARG00000008180	SF1	100	95.164	ENSMAUG00000014064	Sf1	81	95.164	Mesocricetus_auratus
ENSSARG00000008180	SF1	100	95.745	ENSMICG00000001202	SF1	93	94.710	Microcebus_murinus
ENSSARG00000008180	SF1	100	94.971	ENSMOCG00000022038	Sf1	81	94.971	Microtus_ochrogaster
ENSSARG00000008180	SF1	71	77.112	ENSMMOG00000020474	sf1	59	72.167	Mola_mola
ENSSARG00000008180	SF1	82	93.176	ENSMODG00000029407	SF1	92	93.176	Monodelphis_domestica
ENSSARG00000008180	SF1	71	78.512	ENSMALG00000020521	sf1	67	72.330	Monopterus_albus
ENSSARG00000008180	SF1	100	95.164	MGP_CAROLIEiJ_G0022607	Sf1	100	92.884	Mus_caroli
ENSSARG00000008180	SF1	100	95.164	ENSMUSG00000024949	Sf1	100	92.884	Mus_musculus
ENSSARG00000008180	SF1	100	95.164	MGP_PahariEiJ_G0014101	Sf1	100	92.884	Mus_pahari
ENSSARG00000008180	SF1	100	95.164	MGP_SPRETEiJ_G0023518	Sf1	100	92.884	Mus_spretus
ENSSARG00000008180	SF1	100	95.551	ENSMPUG00000012684	SF1	81	95.551	Mustela_putorius_furo
ENSSARG00000008180	SF1	100	95.358	ENSMLUG00000015217	-	81	95.358	Myotis_lucifugus
ENSSARG00000008180	SF1	86	89.686	ENSMLUG00000029800	-	70	90.663	Myotis_lucifugus
ENSSARG00000008180	SF1	100	95.551	ENSNGAG00000005550	Sf1	81	95.551	Nannospalax_galili
ENSSARG00000008180	SF1	71	79.133	ENSNBRG00000017606	sf1	60	74.696	Neolamprologus_brichardi
ENSSARG00000008180	SF1	100	95.745	ENSNLEG00000005236	-	88	94.565	Nomascus_leucogenys
ENSSARG00000008180	SF1	99	94.521	ENSMEUG00000013424	SF1	96	94.521	Notamacropus_eugenii
ENSSARG00000008180	SF1	92	97.679	ENSOPRG00000005008	SF1	96	97.679	Ochotona_princeps
ENSSARG00000008180	SF1	88	89.693	ENSODEG00000006102	-	78	88.975	Octodon_degus
ENSSARG00000008180	SF1	71	77.836	ENSONIG00000015728	sf1	59	73.861	Oreochromis_niloticus
ENSSARG00000008180	SF1	78	83.005	ENSOANG00000002909	SF1	96	82.097	Ornithorhynchus_anatinus
ENSSARG00000008180	SF1	100	95.551	ENSOCUG00000026486	SF1	82	95.551	Oryctolagus_cuniculus
ENSSARG00000008180	SF1	73	76.227	ENSORLG00000011853	sf1	58	72.397	Oryzias_latipes
ENSSARG00000008180	SF1	73	76.227	ENSORLG00020011834	sf1	58	72.397	Oryzias_latipes_hni
ENSSARG00000008180	SF1	71	75.926	ENSORLG00015012855	sf1	58	72.155	Oryzias_latipes_hsok
ENSSARG00000008180	SF1	71	77.249	ENSOMEG00000005210	sf1	59	73.366	Oryzias_melastigma
ENSSARG00000008180	SF1	100	95.745	ENSOGAG00000016196	SF1	81	95.745	Otolemur_garnettii
ENSSARG00000008180	SF1	100	91.328	ENSOARG00000009166	SF1	80	92.325	Ovis_aries
ENSSARG00000008180	SF1	97	95.618	ENSPPAG00000002799	-	95	94.949	Pan_paniscus
ENSSARG00000008180	SF1	100	95.745	ENSPPRG00000013566	SF1	82	95.618	Panthera_pardus
ENSSARG00000008180	SF1	84	95.392	ENSPTIG00000016141	SF1	78	95.392	Panthera_tigris_altaica
ENSSARG00000008180	SF1	100	95.745	ENSPTRG00000003846	SF1	97	95.181	Pan_troglodytes
ENSSARG00000008180	SF1	100	95.745	ENSPANG00000020754	SF1	94	95.745	Papio_anubis
ENSSARG00000008180	SF1	63	78.078	ENSPKIG00000012116	sf1	88	73.352	Paramormyrops_kingsleyae
ENSSARG00000008180	SF1	67	83.761	ENSPSIG00000003610	SF1	81	76.755	Pelodiscus_sinensis
ENSSARG00000008180	SF1	100	95.164	ENSPEMG00000010463	Sf1	81	95.164	Peromyscus_maniculatus_bairdii
ENSSARG00000008180	SF1	65	68.452	ENSPMAG00000008272	sf1	53	63.686	Petromyzon_marinus
ENSSARG00000008180	SF1	100	94.391	ENSPCIG00000018173	SF1	81	94.391	Phascolarctos_cinereus
ENSSARG00000008180	SF1	71	80.707	ENSPFOG00000013683	sf1	66	76.471	Poecilia_formosa
ENSSARG00000008180	SF1	71	79.045	ENSPLAG00000018076	sf1	61	74.820	Poecilia_latipinna
ENSSARG00000008180	SF1	71	79.045	ENSPMEG00000005726	sf1	62	75.060	Poecilia_mexicana
ENSSARG00000008180	SF1	71	78.515	ENSPREG00000004155	sf1	59	74.341	Poecilia_reticulata
ENSSARG00000008180	SF1	100	95.745	ENSPPYG00000003098	-	98	95.745	Pongo_abelii
ENSSARG00000008180	SF1	100	95.164	ENSPCAG00000013631	SF1	77	95.164	Procavia_capensis
ENSSARG00000008180	SF1	100	95.745	ENSPCOG00000027546	SF1	93	94.710	Propithecus_coquereli
ENSSARG00000008180	SF1	100	95.164	ENSPVAG00000016938	SF1	78	95.164	Pteropus_vampyrus
ENSSARG00000008180	SF1	71	77.867	ENSPNYG00000004673	sf1	59	73.621	Pundamilia_nyererei
ENSSARG00000008180	SF1	71	81.067	ENSPNAG00000013072	sf1	59	74.279	Pygocentrus_nattereri
ENSSARG00000008180	SF1	100	95.164	ENSRNOG00000021085	Sf1	89	97.333	Rattus_norvegicus
ENSSARG00000008180	SF1	93	92.083	ENSRBIG00000042818	SF1	89	94.340	Rhinopithecus_bieti
ENSSARG00000008180	SF1	100	93.103	ENSRROG00000045655	SF1	96	95.618	Rhinopithecus_roxellana
ENSSARG00000008180	SF1	56	39.934	YLR116W	MSL5	61	40.065	Saccharomyces_cerevisiae
ENSSARG00000008180	SF1	100	76.596	ENSSBOG00000022267	-	97	77.037	Saimiri_boliviensis_boliviensis
ENSSARG00000008180	SF1	76	88.250	ENSSHAG00000006841	SF1	73	89.500	Sarcophilus_harrisii
ENSSARG00000008180	SF1	76	76.000	ENSSFOG00015021978	sf1	55	72.881	Scleropages_formosus
ENSSARG00000008180	SF1	78	71.971	ENSSMAG00000007549	sf1	62	72.143	Scophthalmus_maximus
ENSSARG00000008180	SF1	71	76.190	ENSSDUG00000003903	sf1	61	72.639	Seriola_dumerili
ENSSARG00000008180	SF1	71	76.471	ENSSLDG00000013075	sf1	59	72.639	Seriola_lalandi_dorsalis
ENSSARG00000008180	SF1	97	77.395	ENSSPUG00000012907	SF1	86	75.048	Sphenodon_punctatus
ENSSARG00000008180	SF1	71	76.738	ENSSPAG00000019060	sf1	58	72.397	Stegastes_partitus
ENSSARG00000008180	SF1	100	95.551	ENSSSCG00000013021	SF1	94	95.551	Sus_scrofa
ENSSARG00000008180	SF1	99	59.423	ENSTNIG00000004820	sf1	77	64.964	Tetraodon_nigroviridis
ENSSARG00000008180	SF1	88	84.498	ENSTBEG00000013133	SF1	66	84.868	Tupaia_belangeri
ENSSARG00000008180	SF1	100	88.201	ENSTTRG00000008857	SF1	96	85.300	Tursiops_truncatus
ENSSARG00000008180	SF1	80	94.189	ENSUAMG00000011977	SF1	78	94.189	Ursus_americanus
ENSSARG00000008180	SF1	88	91.904	ENSUMAG00000007268	SF1	88	92.325	Ursus_maritimus
ENSSARG00000008180	SF1	69	94.758	ENSVPAG00000011912	SF1	65	94.758	Vicugna_pacos
ENSSARG00000008180	SF1	100	95.745	ENSVVUG00000028585	SF1	94	95.745	Vulpes_vulpes
ENSSARG00000008180	SF1	89	72.845	ENSXETG00000008434	sf1	67	77.206	Xenopus_tropicalis
ENSSARG00000008180	SF1	71	80.548	ENSXCOG00000003704	sf1	75	76.733	Xiphophorus_couchianus
ENSSARG00000008180	SF1	71	78.571	ENSXMAG00000007822	sf1	61	75.060	Xiphophorus_maculatus