EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000009260 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 63584 bases
Position: chrGeneScaffold_2345:101303-164886
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000008393	RTC	PF01137.21	7e-57	1	1
ENSSARP00000008393	RTC_insert	PF05189.13	4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000009278	RCL1-201	1116	-	ENSSARP00000008393	371 (aa)	-	UPI00015821DF

Gene Model

Click here to download ENSSARG00000009260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000009260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000009260	RCL1	100	96.247	ENSG00000120158	RCL1	100	96.744	Homo_sapiens
ENSSARG00000009260	RCL1	100	78.075	ENSAPOG00000015666	rcl1	100	78.075	Acanthochromis_polyacanthus
ENSSARG00000009260	RCL1	100	96.247	ENSAMEG00000002631	RCL1	100	96.247	Ailuropoda_melanoleuca
ENSSARG00000009260	RCL1	99	78.919	ENSACIG00000021195	rcl1	99	78.919	Amphilophus_citrinellus
ENSSARG00000009260	RCL1	100	77.273	ENSAOCG00000002223	rcl1	100	77.273	Amphiprion_ocellaris
ENSSARG00000009260	RCL1	100	77.540	ENSAPEG00000006905	rcl1	100	77.540	Amphiprion_percula
ENSSARG00000009260	RCL1	99	76.216	ENSATEG00000020026	rcl1	99	76.216	Anabas_testudineus
ENSSARG00000009260	RCL1	88	88.415	ENSAPLG00000006031	RCL1	100	88.415	Anas_platyrhynchos
ENSSARG00000009260	RCL1	100	85.255	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSSARG00000009260	RCL1	100	95.442	ENSANAG00000037372	RCL1	100	95.442	Aotus_nancymaae
ENSSARG00000009260	RCL1	99	78.919	ENSACLG00000021724	rcl1	99	78.919	Astatotilapia_calliptera
ENSSARG00000009260	RCL1	98	78.533	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSSARG00000009260	RCL1	99	45.745	WBGene00022852	ZK1127.5	99	45.745	Caenorhabditis_elegans
ENSSARG00000009260	RCL1	100	95.979	ENSCJAG00000011202	RCL1	100	95.979	Callithrix_jacchus
ENSSARG00000009260	RCL1	100	94.906	ENSCAFG00000002091	RCL1	100	94.906	Canis_familiaris
ENSSARG00000009260	RCL1	100	94.906	ENSCAFG00020000638	RCL1	78	94.906	Canis_lupus_dingo
ENSSARG00000009260	RCL1	100	94.102	ENSCHIG00000012407	RCL1	100	94.102	Capra_hircus
ENSSARG00000009260	RCL1	88	97.248	ENSTSYG00000009592	RCL1	97	96.133	Carlito_syrichta
ENSSARG00000009260	RCL1	66	83.333	ENSCAPG00000013575	RCL1	100	83.333	Cavia_aperea
ENSSARG00000009260	RCL1	100	94.906	ENSCPOG00000015354	RCL1	100	94.906	Cavia_porcellus
ENSSARG00000009260	RCL1	100	95.979	ENSCCAG00000033505	RCL1	100	95.979	Cebus_capucinus
ENSSARG00000009260	RCL1	100	95.710	ENSCATG00000034721	RCL1	100	95.710	Cercocebus_atys
ENSSARG00000009260	RCL1	100	94.638	ENSCLAG00000007445	RCL1	100	94.638	Chinchilla_lanigera
ENSSARG00000009260	RCL1	100	95.979	ENSCSAG00000008811	RCL1	100	95.979	Chlorocebus_sabaeus
ENSSARG00000009260	RCL1	87	82.243	ENSCHOG00000007216	RCL1	100	82.243	Choloepus_hoffmanni
ENSSARG00000009260	RCL1	100	88.204	ENSCPBG00000025481	RCL1	94	89.329	Chrysemys_picta_bellii
ENSSARG00000009260	RCL1	98	58.378	ENSCING00000019565	-	98	58.378	Ciona_intestinalis
ENSSARG00000009260	RCL1	100	95.979	ENSCANG00000027099	RCL1	100	95.979	Colobus_angolensis_palliatus
ENSSARG00000009260	RCL1	100	94.638	ENSCGRG00001013748	Rcl1	100	94.638	Cricetulus_griseus_chok1gshd
ENSSARG00000009260	RCL1	89	95.441	ENSCGRG00000005843	Rcl1	100	95.441	Cricetulus_griseus_crigri
ENSSARG00000009260	RCL1	99	78.378	ENSCSEG00000000712	rcl1	97	78.378	Cynoglossus_semilaevis
ENSSARG00000009260	RCL1	99	80.270	ENSCVAG00000011536	rcl1	99	80.270	Cyprinodon_variegatus
ENSSARG00000009260	RCL1	98	76.022	ENSDARG00000038312	rcl1	100	76.022	Danio_rerio
ENSSARG00000009260	RCL1	71	95.849	ENSDNOG00000019911	RCL1	100	95.849	Dasypus_novemcinctus
ENSSARG00000009260	RCL1	100	95.710	ENSDORG00000015645	Rcl1	100	95.710	Dipodomys_ordii
ENSSARG00000009260	RCL1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSSARG00000009260	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSSARG00000009260	RCL1	100	54.667	ENSEBUG00000016621	-	100	54.667	Eptatretus_burgeri
ENSSARG00000009260	RCL1	100	95.442	ENSEASG00005010653	RCL1	100	95.442	Equus_asinus_asinus
ENSSARG00000009260	RCL1	100	95.442	ENSECAG00000015973	RCL1	100	95.442	Equus_caballus
ENSSARG00000009260	RCL1	100	80.965	ENSEEUG00000009801	RCL1	100	80.965	Erinaceus_europaeus
ENSSARG00000009260	RCL1	100	75.936	ENSELUG00000007353	rcl1	100	75.936	Esox_lucius
ENSSARG00000009260	RCL1	100	93.566	ENSFCAG00000014557	RCL1	100	93.566	Felis_catus
ENSSARG00000009260	RCL1	88	88.073	ENSFALG00000010553	RCL1	87	88.073	Ficedula_albicollis
ENSSARG00000009260	RCL1	88	94.801	ENSFDAG00000004209	RCL1	100	94.801	Fukomys_damarensis
ENSSARG00000009260	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSSARG00000009260	RCL1	99	76.486	ENSGMOG00000004677	rcl1	99	76.486	Gadus_morhua
ENSSARG00000009260	RCL1	99	86.450	ENSGALG00000015024	RCL1	99	86.450	Gallus_gallus
ENSSARG00000009260	RCL1	99	78.108	ENSGAFG00000007257	rcl1	99	78.108	Gambusia_affinis
ENSSARG00000009260	RCL1	100	77.273	ENSGACG00000017474	rcl1	100	77.273	Gasterosteus_aculeatus
ENSSARG00000009260	RCL1	100	88.204	ENSGAGG00000003689	RCL1	100	88.204	Gopherus_agassizii
ENSSARG00000009260	RCL1	100	95.710	ENSGGOG00000015041	RCL1	100	95.710	Gorilla_gorilla
ENSSARG00000009260	RCL1	99	78.649	ENSHBUG00000001393	rcl1	99	78.649	Haplochromis_burtoni
ENSSARG00000009260	RCL1	100	78.820	ENSHGLG00000005368	-	100	78.284	Heterocephalus_glaber_female
ENSSARG00000009260	RCL1	100	94.638	ENSHGLG00000016452	RCL1	100	94.638	Heterocephalus_glaber_female
ENSSARG00000009260	RCL1	100	89.218	ENSHGLG00100008718	-	100	89.218	Heterocephalus_glaber_male
ENSSARG00000009260	RCL1	100	79.893	ENSHGLG00100018010	-	100	79.357	Heterocephalus_glaber_male
ENSSARG00000009260	RCL1	99	77.838	ENSHCOG00000020170	rcl1	99	77.838	Hippocampus_comes
ENSSARG00000009260	RCL1	98	79.076	ENSIPUG00000018054	RCL1	99	79.076	Ictalurus_punctatus
ENSSARG00000009260	RCL1	100	94.906	ENSSTOG00000000023	RCL1	100	94.906	Ictidomys_tridecemlineatus
ENSSARG00000009260	RCL1	100	83.602	ENSJJAG00000015632	-	100	83.602	Jaculus_jaculus
ENSSARG00000009260	RCL1	54	71.144	ENSJJAG00000000764	-	95	71.134	Jaculus_jaculus
ENSSARG00000009260	RCL1	100	94.102	ENSJJAG00000022803	-	100	94.102	Jaculus_jaculus
ENSSARG00000009260	RCL1	98	78.202	ENSKMAG00000011946	rcl1	99	78.202	Kryptolebias_marmoratus
ENSSARG00000009260	RCL1	99	76.359	ENSLBEG00000003957	rcl1	99	76.359	Labrus_bergylta
ENSSARG00000009260	RCL1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
ENSSARG00000009260	RCL1	100	81.769	ENSLOCG00000010148	rcl1	98	81.769	Lepisosteus_oculatus
ENSSARG00000009260	RCL1	100	91.153	ENSLAFG00000017495	RCL1	100	91.153	Loxodonta_africana
ENSSARG00000009260	RCL1	100	95.979	ENSMFAG00000037906	RCL1	100	95.979	Macaca_fascicularis
ENSSARG00000009260	RCL1	100	95.979	ENSMNEG00000012288	RCL1	100	95.979	Macaca_nemestrina
ENSSARG00000009260	RCL1	100	95.979	ENSMLEG00000043088	RCL1	100	95.979	Mandrillus_leucophaeus
ENSSARG00000009260	RCL1	99	78.378	ENSMAMG00000008311	rcl1	99	78.378	Mastacembelus_armatus
ENSSARG00000009260	RCL1	99	78.919	ENSMZEG00005017292	rcl1	99	78.919	Maylandia_zebra
ENSSARG00000009260	RCL1	58	85.845	ENSMGAG00000002245	RCL1	97	85.849	Meleagris_gallopavo
ENSSARG00000009260	RCL1	58	95.814	ENSMAUG00000008922	Rcl1	97	95.673	Mesocricetus_auratus
ENSSARG00000009260	RCL1	100	94.370	ENSMICG00000015562	RCL1	100	94.370	Microcebus_murinus
ENSSARG00000009260	RCL1	100	95.174	ENSMOCG00000012145	Rcl1	100	95.174	Microtus_ochrogaster
ENSSARG00000009260	RCL1	99	75.472	ENSMMOG00000021264	rcl1	99	75.472	Mola_mola
ENSSARG00000009260	RCL1	95	93.239	ENSMODG00000015377	RCL1	94	93.239	Monodelphis_domestica
ENSSARG00000009260	RCL1	99	77.297	ENSMALG00000018618	rcl1	99	77.297	Monopterus_albus
ENSSARG00000009260	RCL1	100	95.442	MGP_CAROLIEiJ_G0022853	Rcl1	100	95.442	Mus_caroli
ENSSARG00000009260	RCL1	100	94.906	ENSMUSG00000024785	Rcl1	100	94.906	Mus_musculus
ENSSARG00000009260	RCL1	100	94.906	MGP_PahariEiJ_G0014346	Rcl1	100	96.471	Mus_pahari
ENSSARG00000009260	RCL1	100	94.638	MGP_SPRETEiJ_G0023771	Rcl1	100	95.882	Mus_spretus
ENSSARG00000009260	RCL1	100	95.174	ENSMPUG00000004998	RCL1	100	95.174	Mustela_putorius_furo
ENSSARG00000009260	RCL1	100	94.638	ENSMLUG00000009654	RCL1	100	94.638	Myotis_lucifugus
ENSSARG00000009260	RCL1	100	95.174	ENSNGAG00000015327	Rcl1	100	95.174	Nannospalax_galili
ENSSARG00000009260	RCL1	92	78.006	ENSNBRG00000019854	rcl1	99	74.309	Neolamprologus_brichardi
ENSSARG00000009260	RCL1	100	93.029	ENSNLEG00000008891	RCL1	100	93.029	Nomascus_leucogenys
ENSSARG00000009260	RCL1	100	86.595	ENSMEUG00000007653	RCL1	100	86.595	Notamacropus_eugenii
ENSSARG00000009260	RCL1	100	94.370	ENSOPRG00000010965	RCL1	100	94.370	Ochotona_princeps
ENSSARG00000009260	RCL1	88	78.313	ENSODEG00000004151	RCL1	96	79.268	Octodon_degus
ENSSARG00000009260	RCL1	99	78.919	ENSONIG00000003871	rcl1	99	78.919	Oreochromis_niloticus
ENSSARG00000009260	RCL1	67	88.142	ENSOANG00000013193	-	100	88.142	Ornithorhynchus_anatinus
ENSSARG00000009260	RCL1	100	95.710	ENSOCUG00000008161	RCL1	100	95.710	Oryctolagus_cuniculus
ENSSARG00000009260	RCL1	100	76.471	ENSORLG00000010443	rcl1	100	76.471	Oryzias_latipes
ENSSARG00000009260	RCL1	100	76.471	ENSORLG00020012211	rcl1	100	76.471	Oryzias_latipes_hni
ENSSARG00000009260	RCL1	100	76.203	ENSORLG00015001122	rcl1	100	76.203	Oryzias_latipes_hsok
ENSSARG00000009260	RCL1	100	78.075	ENSOMEG00000022976	rcl1	88	78.075	Oryzias_melastigma
ENSSARG00000009260	RCL1	100	93.566	ENSOGAG00000007480	RCL1	100	93.566	Otolemur_garnettii
ENSSARG00000009260	RCL1	100	94.370	ENSOARG00000013463	RCL1	100	94.370	Ovis_aries
ENSSARG00000009260	RCL1	100	95.979	ENSPPAG00000037958	RCL1	100	95.979	Pan_paniscus
ENSSARG00000009260	RCL1	100	93.011	ENSPPRG00000022645	RCL1	100	93.011	Panthera_pardus
ENSSARG00000009260	RCL1	88	94.785	ENSPTIG00000019031	RCL1	97	93.269	Panthera_tigris_altaica
ENSSARG00000009260	RCL1	100	95.710	ENSPTRG00000020743	RCL1	100	95.710	Pan_troglodytes
ENSSARG00000009260	RCL1	100	95.979	ENSPANG00000025151	RCL1	100	95.979	Papio_anubis
ENSSARG00000009260	RCL1	100	78.075	ENSPKIG00000021022	rcl1	100	78.075	Paramormyrops_kingsleyae
ENSSARG00000009260	RCL1	88	89.329	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSSARG00000009260	RCL1	100	75.936	ENSPMGG00000024007	rcl1	100	75.936	Periophthalmus_magnuspinnatus
ENSSARG00000009260	RCL1	100	95.710	ENSPEMG00000023275	Rcl1	100	95.710	Peromyscus_maniculatus_bairdii
ENSSARG00000009260	RCL1	95	30.748	ENSPMAG00000009110	rtca	95	30.748	Petromyzon_marinus
ENSSARG00000009260	RCL1	100	93.566	ENSPCIG00000000188	RCL1	100	93.566	Phascolarctos_cinereus
ENSSARG00000009260	RCL1	99	79.189	ENSPFOG00000019682	rcl1	99	79.189	Poecilia_formosa
ENSSARG00000009260	RCL1	99	79.189	ENSPLAG00000022354	rcl1	99	79.189	Poecilia_latipinna
ENSSARG00000009260	RCL1	99	79.189	ENSPMEG00000008131	rcl1	99	79.189	Poecilia_mexicana
ENSSARG00000009260	RCL1	99	78.919	ENSPREG00000008032	rcl1	99	78.919	Poecilia_reticulata
ENSSARG00000009260	RCL1	100	95.979	ENSPPYG00000019244	RCL1	100	95.979	Pongo_abelii
ENSSARG00000009260	RCL1	100	84.677	ENSPCAG00000001440	RCL1	100	84.677	Procavia_capensis
ENSSARG00000009260	RCL1	100	95.710	ENSPCOG00000009611	RCL1	100	95.710	Propithecus_coquereli
ENSSARG00000009260	RCL1	100	95.710	ENSPVAG00000015752	RCL1	100	95.710	Pteropus_vampyrus
ENSSARG00000009260	RCL1	99	78.919	ENSPNYG00000012910	rcl1	99	78.919	Pundamilia_nyererei
ENSSARG00000009260	RCL1	99	78.552	ENSPNAG00000028307	rcl1	92	78.552	Pygocentrus_nattereri
ENSSARG00000009260	RCL1	100	94.638	ENSRNOG00000015491	Rcl1	100	94.638	Rattus_norvegicus
ENSSARG00000009260	RCL1	100	95.710	ENSRBIG00000035818	RCL1	100	95.710	Rhinopithecus_bieti
ENSSARG00000009260	RCL1	100	95.979	ENSRROG00000029781	RCL1	100	95.979	Rhinopithecus_roxellana
ENSSARG00000009260	RCL1	98	35.676	YOL010W	-	97	35.638	Saccharomyces_cerevisiae
ENSSARG00000009260	RCL1	100	95.979	ENSSBOG00000026369	RCL1	100	95.979	Saimiri_boliviensis_boliviensis
ENSSARG00000009260	RCL1	88	93.293	ENSSHAG00000014086	RCL1	99	93.293	Sarcophilus_harrisii
ENSSARG00000009260	RCL1	100	79.412	ENSSFOG00015023020	rcl1	100	79.412	Scleropages_formosus
ENSSARG00000009260	RCL1	99	78.649	ENSSMAG00000019751	rcl1	85	78.649	Scophthalmus_maximus
ENSSARG00000009260	RCL1	100	78.075	ENSSDUG00000006349	rcl1	100	78.075	Seriola_dumerili
ENSSARG00000009260	RCL1	100	77.807	ENSSLDG00000022076	rcl1	100	77.807	Seriola_lalandi_dorsalis
ENSSARG00000009260	RCL1	100	87.668	ENSSPUG00000016330	RCL1	100	87.668	Sphenodon_punctatus
ENSSARG00000009260	RCL1	100	78.877	ENSSPAG00000018038	rcl1	100	78.877	Stegastes_partitus
ENSSARG00000009260	RCL1	100	96.515	ENSSSCG00000005217	RCL1	83	96.515	Sus_scrofa
ENSSARG00000009260	RCL1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSSARG00000009260	RCL1	99	78.649	ENSTRUG00000010493	rcl1	99	78.649	Takifugu_rubripes
ENSSARG00000009260	RCL1	99	77.507	ENSTNIG00000013214	rcl1	99	77.507	Tetraodon_nigroviridis
ENSSARG00000009260	RCL1	100	88.472	ENSTBEG00000016339	RCL1	100	88.472	Tupaia_belangeri
ENSSARG00000009260	RCL1	100	94.906	ENSTTRG00000016525	RCL1	100	94.906	Tursiops_truncatus
ENSSARG00000009260	RCL1	100	96.247	ENSUAMG00000005598	RCL1	100	96.296	Ursus_americanus
ENSSARG00000009260	RCL1	88	96.636	ENSUMAG00000017890	RCL1	97	96.636	Ursus_maritimus
ENSSARG00000009260	RCL1	88	97.554	ENSVPAG00000009188	RCL1	100	97.554	Vicugna_pacos
ENSSARG00000009260	RCL1	89	96.061	ENSVVUG00000007304	RCL1	89	96.061	Vulpes_vulpes
ENSSARG00000009260	RCL1	100	75.134	ENSXETG00000000592	rcl1	100	75.134	Xenopus_tropicalis
ENSSARG00000009260	RCL1	57	30.233	ENSXCOG00000008002	rtca	62	30.233	Xiphophorus_couchianus
ENSSARG00000009260	RCL1	99	79.189	ENSXCOG00000004922	rcl1	99	79.189	Xiphophorus_couchianus
ENSSARG00000009260	RCL1	99	79.189	ENSXMAG00000022366	RCL1	99	79.189	Xiphophorus_maculatus