EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSARG00000009600 (Gene tree)
Gene ID
-
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Sorex_araneus
Status
putative
Strand
Minus strand
Length
85076 bases
Position
chrGeneScaffold_5319:7798-92873
Accession
26721
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSARP00000008685PAT1PF09770.91.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSART00000009607PATL1-2012313-ENSSARP00000008685770 (aa)-UPI00015813AD
Gene Model
Click here to download ENSSARG00000009600's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000009600's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSARG00000009600PATL15136.387ENSSARG00000009047PATL27535.623
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSARG00000009600PATL16334.292ENSG00000229474PATL29936.538Homo_sapiens
ENSSARG00000009600PATL18098.810ENSG00000166889PATL18098.810Homo_sapiens
ENSSARG00000009600PATL15454.197ENSAPOG00000021290patl16550.857Acanthochromis_polyacanthus
ENSSARG00000009600PATL15835.920ENSAPOG00000022988patl25935.431Acanthochromis_polyacanthus
ENSSARG00000009600PATL18097.619ENSAMEG00000014215PATL18097.619Ailuropoda_melanoleuca
ENSSARG00000009600PATL15934.205ENSAMEG00000014997PATL27534.466Ailuropoda_melanoleuca
ENSSARG00000009600PATL16850.000ENSACIG00000005182patl16450.951Amphilophus_citrinellus
ENSSARG00000009600PATL16933.455ENSAOCG00000023738patl25334.773Amphiprion_ocellaris
ENSSARG00000009600PATL15454.327ENSAOCG00000021993patl16151.619Amphiprion_ocellaris
ENSSARG00000009600PATL15454.197ENSAPEG00000021391patl15951.141Amphiprion_percula
ENSSARG00000009600PATL15935.385ENSAPEG00000011299patl26434.633Amphiprion_percula
ENSSARG00000009600PATL16851.238ENSATEG00000002230patl15749.343Anabas_testudineus
ENSSARG00000009600PATL16433.925ENSATEG00000019567patl26035.561Anabas_testudineus
ENSSARG00000009600PATL15876.053ENSAPLG00000013394PATL18776.053Anas_platyrhynchos
ENSSARG00000009600PATL15339.130ENSAPLG00000003980PATL26437.890Anas_platyrhynchos
ENSSARG00000009600PATL18081.356ENSACAG00000006607PATL18080.226Anolis_carolinensis
ENSSARG00000009600PATL18098.810ENSANAG00000023078PATL18098.810Aotus_nancymaae
ENSSARG00000009600PATL16235.331ENSACLG00000010326patl25436.277Astatotilapia_calliptera
ENSSARG00000009600PATL15455.396ENSACLG00000005144patl15751.048Astatotilapia_calliptera
ENSSARG00000009600PATL15453.589ENSAMXG00000010731patl16450.760Astyanax_mexicanus
ENSSARG00000009600PATL16235.830ENSAMXG00000020293patl25737.410Astyanax_mexicanus
ENSSARG00000009600PATL18096.429ENSBTAG00000005913PATL18096.429Bos_taurus
ENSSARG00000009600PATL16334.568ENSCJAG00000002379PATL27236.232Callithrix_jacchus
ENSSARG00000009600PATL18097.619ENSCJAG00000016192PATL18097.619Callithrix_jacchus
ENSSARG00000009600PATL18098.810ENSCAFG00000007581PATL18098.810Canis_familiaris
ENSSARG00000009600PATL16434.269ENSCAFG00000013629PATL27235.990Canis_familiaris
ENSSARG00000009600PATL16434.337ENSCAFG00020022169PATL27235.990Canis_lupus_dingo
ENSSARG00000009600PATL17998.810ENSCAFG00020001648PATL18298.810Canis_lupus_dingo
ENSSARG00000009600PATL16236.550ENSCHIG00000026665PATL27437.264Capra_hircus
ENSSARG00000009600PATL18096.429ENSCHIG00000025913PATL18096.429Capra_hircus
ENSSARG00000009600PATL17995.238ENSTSYG00000012748PATL17895.238Carlito_syrichta
ENSSARG00000009600PATL18095.238ENSCAPG00000013668PATL17995.238Cavia_aperea
ENSSARG00000009600PATL18095.238ENSCPOG00000006827PATL18095.238Cavia_porcellus
ENSSARG00000009600PATL18098.810ENSCCAG00000023759PATL18098.810Cebus_capucinus
ENSSARG00000009600PATL18098.810ENSCATG00000009629PATL18098.810Cercocebus_atys
ENSSARG00000009600PATL18096.429ENSCLAG00000003427PATL18096.429Chinchilla_lanigera
ENSSARG00000009600PATL15135.623ENSCLAG00000014407PATL27335.623Chinchilla_lanigera
ENSSARG00000009600PATL175100.000ENSCSAG00000006095PATL184100.000Chlorocebus_sabaeus
ENSSARG00000009600PATL15595.540ENSCHOG00000001611PATL16895.540Choloepus_hoffmanni
ENSSARG00000009600PATL15837.723ENSCPBG00000006150PATL25937.923Chrysemys_picta_bellii
ENSSARG00000009600PATL16334.146ENSCANG00000013856PATL27435.915Colobus_angolensis_palliatus
ENSSARG00000009600PATL18098.810ENSCANG00000039197PATL18098.810Colobus_angolensis_palliatus
ENSSARG00000009600PATL18095.085ENSCGRG00001024927Patl18095.085Cricetulus_griseus_chok1gshd
ENSSARG00000009600PATL18095.085ENSCGRG00000000461Patl18095.085Cricetulus_griseus_crigri
ENSSARG00000009600PATL15554.048ENSCSEG00000008261patl16750.667Cynoglossus_semilaevis
ENSSARG00000009600PATL16035.332ENSCSEG00000009438patl25935.023Cynoglossus_semilaevis
ENSSARG00000009600PATL15452.518ENSCVAG00000006664patl16549.715Cyprinodon_variegatus
ENSSARG00000009600PATL16030.672ENSCVAG00000016203patl26330.556Cyprinodon_variegatus
ENSSARG00000009600PATL16734.888ENSDARG00000089567patl25736.574Danio_rerio
ENSSARG00000009600PATL16852.015ENSDARG00000017423patl16151.625Danio_rerio
ENSSARG00000009600PATL18095.238ENSDNOG00000038865PATL19693.208Dasypus_novemcinctus
ENSSARG00000009600PATL15136.923ENSDORG00000026649Patl27235.897Dipodomys_ordii
ENSSARG00000009600PATL18098.810ENSDORG00000000237Patl18098.810Dipodomys_ordii
ENSSARG00000009600PATL18096.429ENSEASG00005007963PATL18296.429Equus_asinus_asinus
ENSSARG00000009600PATL18096.429ENSECAG00000011411PATL18096.429Equus_caballus
ENSSARG00000009600PATL15454.762ENSELUG00000024249patl16251.711Esox_lucius
ENSSARG00000009600PATL15834.764ENSELUG00000023244patl25435.407Esox_lucius
ENSSARG00000009600PATL16233.951ENSFCAG00000027170PATL27335.024Felis_catus
ENSSARG00000009600PATL18097.619ENSFCAG00000015573PATL18097.619Felis_catus
ENSSARG00000009600PATL18083.774ENSFALG00000012150PATL17982.231Ficedula_albicollis
ENSSARG00000009600PATL15936.998ENSFALG00000009768PATL25538.015Ficedula_albicollis
ENSSARG00000009600PATL15134.500ENSFDAG00000012242PATL27335.750Fukomys_damarensis
ENSSARG00000009600PATL18092.857ENSFDAG00000016128PATL18092.857Fukomys_damarensis
ENSSARG00000009600PATL15455.663ENSFHEG00000017790patl15950.564Fundulus_heteroclitus
ENSSARG00000009600PATL15831.947ENSGMOG00000005666patl29933.413Gadus_morhua
ENSSARG00000009600PATL17980.153ENSGALG00000042641PATL17980.153Gallus_gallus
ENSSARG00000009600PATL15554.739ENSGAFG00000006508patl15950.847Gambusia_affinis
ENSSARG00000009600PATL16635.283ENSGAFG00000019344patl25536.627Gambusia_affinis
ENSSARG00000009600PATL16949.060ENSGACG00000016448patl16850.187Gasterosteus_aculeatus
ENSSARG00000009600PATL18084.398ENSGAGG00000004461PATL18484.023Gopherus_agassizii
ENSSARG00000009600PATL18098.810ENSGGOG00000004335PATL18098.810Gorilla_gorilla
ENSSARG00000009600PATL16334.497ENSGGOG00000025923PATL27435.915Gorilla_gorilla
ENSSARG00000009600PATL15935.824ENSHBUG00000005929patl26136.038Haplochromis_burtoni
ENSSARG00000009600PATL15455.396ENSHBUG00000005365patl15751.048Haplochromis_burtoni
ENSSARG00000009600PATL18095.238ENSHGLG00000018173PATL18095.238Heterocephalus_glaber_female
ENSSARG00000009600PATL18090.926ENSHGLG00100003453PATL18090.926Heterocephalus_glaber_male
ENSSARG00000009600PATL15835.084ENSHCOG00000016754patl25635.253Hippocampus_comes
ENSSARG00000009600PATL16848.289ENSHCOG00000001898patl15949.524Hippocampus_comes
ENSSARG00000009600PATL15735.135ENSIPUG00000020692patl25635.407Ictalurus_punctatus
ENSSARG00000009600PATL15935.808ENSSTOG00000033848PATL27236.386Ictidomys_tridecemlineatus
ENSSARG00000009600PATL18096.408ENSSTOG00000013764PATL18096.408Ictidomys_tridecemlineatus
ENSSARG00000009600PATL18098.810ENSJJAG00000010135Patl18098.810Jaculus_jaculus
ENSSARG00000009600PATL16233.194ENSKMAG00000021275patl25434.762Kryptolebias_marmoratus
ENSSARG00000009600PATL15555.107ENSKMAG00000020848patl15750.662Kryptolebias_marmoratus
ENSSARG00000009600PATL16851.238ENSLBEG00000023617patl15751.238Labrus_bergylta
ENSSARG00000009600PATL16035.546ENSLBEG00000022344patl25535.484Labrus_bergylta
ENSSARG00000009600PATL17859.551ENSLACG00000004640PATL18159.551Latimeria_chalumnae
ENSSARG00000009600PATL16735.038ENSLACG00000005291-6434.717Latimeria_chalumnae
ENSSARG00000009600PATL16851.810ENSLOCG00000000717patl16252.562Lepisosteus_oculatus
ENSSARG00000009600PATL15236.500ENSLAFG00000031124PATL27335.750Loxodonta_africana
ENSSARG00000009600PATL18096.429ENSLAFG00000015161PATL18096.429Loxodonta_africana
ENSSARG00000009600PATL18098.810ENSMFAG00000040851PATL18098.810Macaca_fascicularis
ENSSARG00000009600PATL18098.810ENSMMUG00000017287PATL18098.810Macaca_mulatta
ENSSARG00000009600PATL18098.810ENSMNEG00000038692PATL18098.810Macaca_nemestrina
ENSSARG00000009600PATL18098.810ENSMLEG00000030044PATL18098.810Mandrillus_leucophaeus
ENSSARG00000009600PATL15456.731ENSMAMG00000003950patl16250.763Mastacembelus_armatus
ENSSARG00000009600PATL16033.895ENSMAMG00000013327patl26134.834Mastacembelus_armatus
ENSSARG00000009600PATL15455.396ENSMZEG00005013404patl15751.048Maylandia_zebra
ENSSARG00000009600PATL16235.331ENSMZEG00005014292patl25436.277Maylandia_zebra
ENSSARG00000009600PATL17280.802ENSMGAG00000003406PATL17879.958Meleagris_gallopavo
ENSSARG00000009600PATL15338.983ENSMGAG00000001309PATL26438.889Meleagris_gallopavo
ENSSARG00000009600PATL17095.092ENSMAUG00000012059Patl17995.092Mesocricetus_auratus
ENSSARG00000009600PATL17997.619ENSMICG00000004172PATL17797.619Microcebus_murinus
ENSSARG00000009600PATL16234.747ENSMOCG00000015367Patl27235.732Microtus_ochrogaster
ENSSARG00000009600PATL18095.274ENSMOCG00000010087Patl18095.274Microtus_ochrogaster
ENSSARG00000009600PATL15431.340ENSMMOG00000001299patl26030.695Mola_mola
ENSSARG00000009600PATL15952.381ENSMMOG00000013711patl15653.846Mola_mola
ENSSARG00000009600PATL16235.451ENSMODG00000017690PATL27136.150Monodelphis_domestica
ENSSARG00000009600PATL18087.759ENSMODG00000020201PATL18086.905Monodelphis_domestica
ENSSARG00000009600PATL15434.606ENSMALG00000008131patl25234.772Monopterus_albus
ENSSARG00000009600PATL18094.707MGP_CAROLIEiJ_G0022739Patl18094.707Mus_caroli
ENSSARG00000009600PATL18096.429ENSMUSG00000046139Patl18096.429Mus_musculus
ENSSARG00000009600PATL18096.429MGP_PahariEiJ_G0014233Patl18096.429Mus_pahari
ENSSARG00000009600PATL18096.429MGP_SPRETEiJ_G0023652Patl18096.429Mus_spretus
ENSSARG00000009600PATL18098.810ENSMPUG00000014607PATL18098.810Mustela_putorius_furo
ENSSARG00000009600PATL18095.238ENSMLUG00000011169PATL17995.238Myotis_lucifugus
ENSSARG00000009600PATL18094.707ENSNGAG00000003682Patl18094.707Nannospalax_galili
ENSSARG00000009600PATL15834.764ENSNBRG00000011745patl25835.800Neolamprologus_brichardi
ENSSARG00000009600PATL17597.619ENSNLEG00000013081PATL17797.619Nomascus_leucogenys
ENSSARG00000009600PATL16334.702ENSNLEG00000005673PATL27535.185Nomascus_leucogenys
ENSSARG00000009600PATL15194.192ENSOPRG00000007963PATL16094.133Ochotona_princeps
ENSSARG00000009600PATL15791.566ENSODEG00000001792PATL17791.566Octodon_degus
ENSSARG00000009600PATL16235.670ENSONIG00000011519patl25436.817Oreochromis_niloticus
ENSSARG00000009600PATL15455.156ENSONIG00000004170patl16649.522Oreochromis_niloticus
ENSSARG00000009600PATL15286.902ENSOANG00000011117-9687.245Ornithorhynchus_anatinus
ENSSARG00000009600PATL15137.313ENSOANG00000001538-8437.838Ornithorhynchus_anatinus
ENSSARG00000009600PATL16134.177ENSOCUG00000006339PATL27435.000Oryctolagus_cuniculus
ENSSARG00000009600PATL18097.619ENSOCUG00000002156PATL18097.619Oryctolagus_cuniculus
ENSSARG00000009600PATL15934.858ENSORLG00000005780patl26732.030Oryzias_latipes
ENSSARG00000009600PATL16433.597ENSORLG00020016506patl26532.276Oryzias_latipes_hni
ENSSARG00000009600PATL16433.531ENSORLG00015014500patl26732.216Oryzias_latipes_hsok
ENSSARG00000009600PATL15453.349ENSORLG00015022240patl15948.008Oryzias_latipes_hsok
ENSSARG00000009600PATL15436.493ENSOMEG00000021628patl25736.730Oryzias_melastigma
ENSSARG00000009600PATL18098.810ENSOGAG00000004351PATL18098.810Otolemur_garnettii
ENSSARG00000009600PATL15435.109ENSOGAG00000004709PATL27234.524Otolemur_garnettii
ENSSARG00000009600PATL16135.983ENSOARG00000003762PATL27236.496Ovis_aries
ENSSARG00000009600PATL18097.619ENSOARG00000012005PATL17797.619Ovis_aries
ENSSARG00000009600PATL18098.810ENSPPAG00000034275PATL18098.810Pan_paniscus
ENSSARG00000009600PATL16334.631ENSPPAG00000007221PATL27335.335Pan_paniscus
ENSSARG00000009600PATL16233.745ENSPPRG00000004279PATL27334.783Panthera_pardus
ENSSARG00000009600PATL18097.619ENSPPRG00000020639PATL18097.619Panthera_pardus
ENSSARG00000009600PATL16233.539ENSPTIG00000018964PATL27334.541Panthera_tigris_altaica
ENSSARG00000009600PATL18097.619ENSPTIG00000019298PATL18097.619Panthera_tigris_altaica
ENSSARG00000009600PATL17997.619ENSPTRG00000003697PATL17897.619Pan_troglodytes
ENSSARG00000009600PATL16334.292ENSPTRG00000041536PATL27334.954Pan_troglodytes
ENSSARG00000009600PATL18098.810ENSPANG00000035620PATL18098.810Papio_anubis
ENSSARG00000009600PATL15435.867ENSPKIG00000016887patl25535.867Paramormyrops_kingsleyae
ENSSARG00000009600PATL16850.000ENSPKIG00000016224patl16351.238Paramormyrops_kingsleyae
ENSSARG00000009600PATL15436.277ENSPSIG00000017690PATL29535.627Pelodiscus_sinensis
ENSSARG00000009600PATL18084.211ENSPSIG00000016206PATL17683.459Pelodiscus_sinensis
ENSSARG00000009600PATL15455.875ENSPMGG00000002644patl16051.048Periophthalmus_magnuspinnatus
ENSSARG00000009600PATL15935.294ENSPMGG00000014550patl26335.849Periophthalmus_magnuspinnatus
ENSSARG00000009600PATL15434.192ENSPEMG00000016509Patl27035.294Peromyscus_maniculatus_bairdii
ENSSARG00000009600PATL18094.896ENSPEMG00000014215Patl18094.896Peromyscus_maniculatus_bairdii
ENSSARG00000009600PATL15236.453ENSPCIG00000018256PATL27636.453Phascolarctos_cinereus
ENSSARG00000009600PATL18088.701ENSPCIG00000010852PATL18087.759Phascolarctos_cinereus
ENSSARG00000009600PATL16948.960ENSPFOG00000007768patl16150.377Poecilia_formosa
ENSSARG00000009600PATL16634.825ENSPFOG00000007305patl25436.298Poecilia_formosa
ENSSARG00000009600PATL15554.632ENSPLAG00000018465patl15950.847Poecilia_latipinna
ENSSARG00000009600PATL16634.825ENSPLAG00000020713patl25436.298Poecilia_latipinna
ENSSARG00000009600PATL15554.225ENSPMEG00000006555patl16050.566Poecilia_mexicana
ENSSARG00000009600PATL16634.825ENSPMEG00000018942patl25436.298Poecilia_mexicana
ENSSARG00000009600PATL15135.075ENSPREG00000023066patl25136.905Poecilia_reticulata
ENSSARG00000009600PATL18098.810ENSPPYG00000003230PATL18098.810Pongo_abelii
ENSSARG00000009600PATL15336.957ENSPCOG00000000295PATL29938.187Propithecus_coquereli
ENSSARG00000009600PATL18096.429ENSPCOG00000020770PATL18296.429Propithecus_coquereli
ENSSARG00000009600PATL16988.679ENSPVAG00000015239PATL18088.113Pteropus_vampyrus
ENSSARG00000009600PATL15935.385ENSPNYG00000017381patl26135.561Pundamilia_nyererei
ENSSARG00000009600PATL16849.714ENSPNAG00000017907patl16051.429Pygocentrus_nattereri
ENSSARG00000009600PATL15735.892ENSPNAG00000002315patl25736.603Pygocentrus_nattereri
ENSSARG00000009600PATL18095.238ENSRNOG00000021052Patl18095.238Rattus_norvegicus
ENSSARG00000009600PATL18098.810ENSRBIG00000032263PATL18098.810Rhinopithecus_bieti
ENSSARG00000009600PATL18098.810ENSRROG00000032861PATL18098.810Rhinopithecus_roxellana
ENSSARG00000009600PATL18098.810ENSSBOG00000025195PATL18098.810Saimiri_boliviensis_boliviensis
ENSSARG00000009600PATL18088.324ENSSHAG00000004309PATL18087.382Sarcophilus_harrisii
ENSSARG00000009600PATL15455.635ENSSFOG00015009614patl16150.286Scleropages_formosus
ENSSARG00000009600PATL15835.052ENSSFOG00015000720patl26135.205Scleropages_formosus
ENSSARG00000009600PATL16533.267ENSSMAG00000017262patl26335.096Scophthalmus_maximus
ENSSARG00000009600PATL16849.143ENSSMAG00000009482patl15650.857Scophthalmus_maximus
ENSSARG00000009600PATL16234.298ENSSDUG00000022927patl25635.484Seriola_dumerili
ENSSARG00000009600PATL16848.577ENSSDUG00000005362patl15649.715Seriola_dumerili
ENSSARG00000009600PATL16633.789ENSSLDG00000017922patl25936.058Seriola_lalandi_dorsalis
ENSSARG00000009600PATL16848.767ENSSLDG00000019146patl15849.905Seriola_lalandi_dorsalis
ENSSARG00000009600PATL18083.208ENSSPUG00000009453PATL17982.453Sphenodon_punctatus
ENSSARG00000009600PATL15934.038ENSSPAG00000004784patl26234.272Stegastes_partitus
ENSSARG00000009600PATL15454.197ENSSPAG00000003187patl16250.857Stegastes_partitus
ENSSARG00000009600PATL18097.619ENSSSCG00000013124PATL186100.000Sus_scrofa
ENSSARG00000009600PATL18082.927ENSTGUG00000006222PATL18081.391Taeniopygia_guttata
ENSSARG00000009600PATL15236.476ENSTGUG00000004619-9837.129Taeniopygia_guttata
ENSSARG00000009600PATL16847.909ENSTRUG00000000709patl16247.909Takifugu_rubripes
ENSSARG00000009600PATL15935.022ENSTRUG00000005647patl25835.335Takifugu_rubripes
ENSSARG00000009600PATL17094.819ENSTBEG00000000796PATL17094.819Tupaia_belangeri
ENSSARG00000009600PATL15195.202ENSTTRG00000009389PATL16496.667Tursiops_truncatus
ENSSARG00000009600PATL15335.351ENSUAMG00000018533PATL27134.783Ursus_americanus
ENSSARG00000009600PATL17996.429ENSUMAG00000018634PATL18498.077Ursus_maritimus
ENSSARG00000009600PATL15335.835ENSUMAG00000007738PATL27135.024Ursus_maritimus
ENSSARG00000009600PATL15396.429ENSVPAG00000009224PATL16296.429Vicugna_pacos
ENSSARG00000009600PATL18098.810ENSVVUG00000016668PATL184100.000Vulpes_vulpes
ENSSARG00000009600PATL16434.879ENSVVUG00000011576PATL27235.990Vulpes_vulpes
ENSSARG00000009600PATL15336.232ENSXETG00000014167patl27833.781Xenopus_tropicalis
ENSSARG00000009600PATL15453.349ENSXCOG00000010808patl18247.529Xiphophorus_couchianus
ENSSARG00000009600PATL16135.729ENSXMAG00000018464patl25436.298Xiphophorus_maculatus
ENSSARG00000009600PATL15554.502ENSXMAG00000013834patl15950.752Xiphophorus_maculatus

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