EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000009740 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 161241 bases
Position: chrGeneScaffold_504:10773-172013
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000008833	S1	PF00575.23	7.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000009769	SRBD1-201	2910	-	ENSSARP00000008833	969 (aa)	-	UPI000158206E

Gene Model

Click here to download ENSSARG00000009740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000009740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000009740	SRBD1	100	78.291	ENSG00000068784	SRBD1	100	78.291	Homo_sapiens
ENSSARG00000009740	SRBD1	100	48.627	ENSAPOG00000005103	si:ch211-117n7.8	94	50.523	Acanthochromis_polyacanthus
ENSSARG00000009740	SRBD1	100	79.598	ENSAMEG00000005993	SRBD1	100	79.598	Ailuropoda_melanoleuca
ENSSARG00000009740	SRBD1	84	53.341	ENSACIG00000009875	si:ch211-117n7.8	95	50.000	Amphilophus_citrinellus
ENSSARG00000009740	SRBD1	100	49.161	ENSAOCG00000024718	si:ch211-117n7.8	94	50.837	Amphiprion_ocellaris
ENSSARG00000009740	SRBD1	95	50.315	ENSAPEG00000002645	si:ch211-117n7.8	97	50.315	Amphiprion_percula
ENSSARG00000009740	SRBD1	85	53.491	ENSATEG00000010844	si:ch211-117n7.8	84	53.491	Anabas_testudineus
ENSSARG00000009740	SRBD1	100	65.500	ENSAPLG00000006313	SRBD1	100	65.600	Anas_platyrhynchos
ENSSARG00000009740	SRBD1	100	77.387	ENSANAG00000025573	SRBD1	100	77.387	Aotus_nancymaae
ENSSARG00000009740	SRBD1	96	49.009	ENSACLG00000024219	si:ch211-117n7.8	94	49.485	Astatotilapia_calliptera
ENSSARG00000009740	SRBD1	94	52.853	ENSAMXG00000004294	SRBD1	93	53.340	Astyanax_mexicanus
ENSSARG00000009740	SRBD1	100	78.894	ENSBTAG00000007508	SRBD1	99	91.772	Bos_taurus
ENSSARG00000009740	SRBD1	100	76.884	ENSCJAG00000000727	SRBD1	100	76.884	Callithrix_jacchus
ENSSARG00000009740	SRBD1	100	79.137	ENSCAFG00000002554	SRBD1	100	79.137	Canis_familiaris
ENSSARG00000009740	SRBD1	100	76.104	ENSCAFG00020026284	SRBD1	91	89.809	Canis_lupus_dingo
ENSSARG00000009740	SRBD1	100	78.894	ENSCHIG00000016535	SRBD1	98	78.894	Capra_hircus
ENSSARG00000009740	SRBD1	100	79.940	ENSTSYG00000012797	SRBD1	100	79.940	Carlito_syrichta
ENSSARG00000009740	SRBD1	100	78.463	ENSCPOG00000004773	SRBD1	100	78.463	Cavia_porcellus
ENSSARG00000009740	SRBD1	100	78.291	ENSCCAG00000025589	SRBD1	100	78.291	Cebus_capucinus
ENSSARG00000009740	SRBD1	100	78.794	ENSCATG00000039530	SRBD1	100	78.794	Cercocebus_atys
ENSSARG00000009740	SRBD1	100	79.213	ENSCLAG00000008623	SRBD1	100	79.213	Chinchilla_lanigera
ENSSARG00000009740	SRBD1	100	78.995	ENSCSAG00000013350	SRBD1	100	78.995	Chlorocebus_sabaeus
ENSSARG00000009740	SRBD1	87	91.083	ENSCHOG00000003805	SRBD1	87	91.083	Choloepus_hoffmanni
ENSSARG00000009740	SRBD1	100	65.729	ENSCPBG00000005677	SRBD1	100	66.334	Chrysemys_picta_bellii
ENSSARG00000009740	SRBD1	80	38.599	ENSCING00000005950	-	99	38.599	Ciona_intestinalis
ENSSARG00000009740	SRBD1	81	40.253	ENSCSAVG00000000861	-	99	40.253	Ciona_savignyi
ENSSARG00000009740	SRBD1	99	78.449	ENSCANG00000016307	SRBD1	99	78.449	Colobus_angolensis_palliatus
ENSSARG00000009740	SRBD1	100	76.518	ENSCGRG00001000513	Srbd1	100	76.518	Cricetulus_griseus_chok1gshd
ENSSARG00000009740	SRBD1	100	76.518	ENSCGRG00000002283	Srbd1	100	76.518	Cricetulus_griseus_crigri
ENSSARG00000009740	SRBD1	87	51.724	ENSCSEG00000000856	si:ch211-117n7.8	86	52.184	Cynoglossus_semilaevis
ENSSARG00000009740	SRBD1	85	53.081	ENSCVAG00000020212	si:ch211-117n7.8	89	53.081	Cyprinodon_variegatus
ENSSARG00000009740	SRBD1	100	78.178	ENSDNOG00000018686	SRBD1	100	78.178	Dasypus_novemcinctus
ENSSARG00000009740	SRBD1	100	76.829	ENSDORG00000010468	Srbd1	100	76.829	Dipodomys_ordii
ENSSARG00000009740	SRBD1	79	38.554	FBgn0051156	CG31156	92	32.937	Drosophila_melanogaster
ENSSARG00000009740	SRBD1	80	80.901	ENSETEG00000000739	SRBD1	83	80.901	Echinops_telfairi
ENSSARG00000009740	SRBD1	74	44.475	ENSEBUG00000008902	si:ch211-117n7.8	96	44.475	Eptatretus_burgeri
ENSSARG00000009740	SRBD1	100	77.108	ENSEASG00005003132	SRBD1	97	91.083	Equus_asinus_asinus
ENSSARG00000009740	SRBD1	100	80.020	ENSECAG00000013865	SRBD1	98	80.020	Equus_caballus
ENSSARG00000009740	SRBD1	95	52.261	ENSELUG00000012592	si:ch211-117n7.8	90	52.261	Esox_lucius
ENSSARG00000009740	SRBD1	100	79.819	ENSFCAG00000005101	SRBD1	100	79.819	Felis_catus
ENSSARG00000009740	SRBD1	100	64.395	ENSFALG00000012966	SRBD1	100	64.293	Ficedula_albicollis
ENSSARG00000009740	SRBD1	99	78.638	ENSFDAG00000016670	SRBD1	98	79.202	Fukomys_damarensis
ENSSARG00000009740	SRBD1	95	50.469	ENSFHEG00000019480	si:ch211-117n7.8	93	50.208	Fundulus_heteroclitus
ENSSARG00000009740	SRBD1	51	52.834	ENSGMOG00000018010	-	100	52.834	Gadus_morhua
ENSSARG00000009740	SRBD1	100	65.552	ENSGALG00000009990	SRBD1	100	65.458	Gallus_gallus
ENSSARG00000009740	SRBD1	90	51.570	ENSGAFG00000019664	si:ch211-117n7.8	87	51.570	Gambusia_affinis
ENSSARG00000009740	SRBD1	63	58.692	ENSGACG00000010794	si:ch211-117n7.8	100	58.506	Gasterosteus_aculeatus
ENSSARG00000009740	SRBD1	83	76.316	ENSGAGG00000006166	SRBD1	97	76.316	Gopherus_agassizii
ENSSARG00000009740	SRBD1	97	78.741	ENSGGOG00000005910	SRBD1	99	78.631	Gorilla_gorilla
ENSSARG00000009740	SRBD1	96	44.802	ENSHBUG00000013207	si:ch211-117n7.8	96	45.144	Haplochromis_burtoni
ENSSARG00000009740	SRBD1	99	79.205	ENSHGLG00000018153	-	99	79.205	Heterocephalus_glaber_female
ENSSARG00000009740	SRBD1	99	79.409	ENSHGLG00100015183	-	99	79.409	Heterocephalus_glaber_male
ENSSARG00000009740	SRBD1	86	55.924	ENSIPUG00000009661	srbd1	94	52.513	Ictalurus_punctatus
ENSSARG00000009740	SRBD1	100	79.594	ENSSTOG00000005898	SRBD1	100	79.594	Ictidomys_tridecemlineatus
ENSSARG00000009740	SRBD1	100	72.589	ENSJJAG00000022244	Srbd1	100	72.589	Jaculus_jaculus
ENSSARG00000009740	SRBD1	99	48.090	ENSKMAG00000003473	si:ch211-117n7.8	93	50.105	Kryptolebias_marmoratus
ENSSARG00000009740	SRBD1	99	48.289	ENSLBEG00000027518	si:ch211-117n7.8	93	49.486	Labrus_bergylta
ENSSARG00000009740	SRBD1	86	65.957	ENSLACG00000009790	SRBD1	99	65.957	Latimeria_chalumnae
ENSSARG00000009740	SRBD1	99	54.062	ENSLOCG00000016360	si:ch211-117n7.8	99	54.062	Lepisosteus_oculatus
ENSSARG00000009740	SRBD1	100	79.095	ENSMFAG00000042026	SRBD1	100	79.095	Macaca_fascicularis
ENSSARG00000009740	SRBD1	100	79.095	ENSMMUG00000003490	SRBD1	100	79.095	Macaca_mulatta
ENSSARG00000009740	SRBD1	100	76.482	ENSMNEG00000034701	SRBD1	100	76.482	Macaca_nemestrina
ENSSARG00000009740	SRBD1	100	78.794	ENSMLEG00000000745	SRBD1	100	78.794	Mandrillus_leucophaeus
ENSSARG00000009740	SRBD1	99	47.059	ENSMAMG00000021921	si:ch211-117n7.8	99	47.348	Mastacembelus_armatus
ENSSARG00000009740	SRBD1	96	49.009	ENSMZEG00005027369	si:ch211-117n7.8	94	49.485	Maylandia_zebra
ENSSARG00000009740	SRBD1	81	69.231	ENSMGAG00000010273	SRBD1	99	69.231	Meleagris_gallopavo
ENSSARG00000009740	SRBD1	80	78.094	ENSMAUG00000013916	Srbd1	99	75.747	Mesocricetus_auratus
ENSSARG00000009740	SRBD1	100	79.518	ENSMICG00000007835	SRBD1	100	79.518	Microcebus_murinus
ENSSARG00000009740	SRBD1	100	75.862	ENSMOCG00000018716	Srbd1	100	75.862	Microtus_ochrogaster
ENSSARG00000009740	SRBD1	97	48.178	ENSMMOG00000007507	si:ch211-117n7.8	99	48.178	Mola_mola
ENSSARG00000009740	SRBD1	100	47.087	ENSMALG00000001562	si:ch211-117n7.8	97	48.543	Monopterus_albus
ENSSARG00000009740	SRBD1	100	74.949	MGP_CAROLIEiJ_G0021934	Srbd1	99	80.844	Mus_caroli
ENSSARG00000009740	SRBD1	100	75.254	ENSMUSG00000024135	Srbd1	96	82.632	Mus_musculus
ENSSARG00000009740	SRBD1	100	73.529	MGP_PahariEiJ_G0020924	Srbd1	100	73.529	Mus_pahari
ENSSARG00000009740	SRBD1	100	75.254	MGP_SPRETEiJ_G0022850	Srbd1	100	75.254	Mus_spretus
ENSSARG00000009740	SRBD1	100	78.090	ENSMLUG00000007039	SRBD1	100	78.090	Myotis_lucifugus
ENSSARG00000009740	SRBD1	100	74.581	ENSNGAG00000011893	Srbd1	100	74.384	Nannospalax_galili
ENSSARG00000009740	SRBD1	96	48.042	ENSNBRG00000012873	si:ch211-117n7.8	96	48.837	Neolamprologus_brichardi
ENSSARG00000009740	SRBD1	100	78.392	ENSNLEG00000016877	SRBD1	100	78.392	Nomascus_leucogenys
ENSSARG00000009740	SRBD1	100	77.213	ENSODEG00000012095	SRBD1	100	77.213	Octodon_degus
ENSSARG00000009740	SRBD1	99	47.271	ENSONIG00000000945	si:ch211-117n7.8	100	53.318	Oreochromis_niloticus
ENSSARG00000009740	SRBD1	100	79.919	ENSOCUG00000015385	SRBD1	100	79.919	Oryctolagus_cuniculus
ENSSARG00000009740	SRBD1	88	49.024	ENSORLG00000004427	si:ch211-117n7.8	83	49.024	Oryzias_latipes
ENSSARG00000009740	SRBD1	98	47.748	ENSORLG00020012792	si:ch211-117n7.8	93	48.758	Oryzias_latipes_hni
ENSSARG00000009740	SRBD1	99	47.316	ENSORLG00015018598	si:ch211-117n7.8	93	48.394	Oryzias_latipes_hsok
ENSSARG00000009740	SRBD1	98	46.567	ENSOMEG00000012229	si:ch211-117n7.8	82	52.081	Oryzias_melastigma
ENSSARG00000009740	SRBD1	100	73.869	ENSOGAG00000001076	SRBD1	100	73.869	Otolemur_garnettii
ENSSARG00000009740	SRBD1	100	74.272	ENSOARG00000005958	SRBD1	100	74.272	Ovis_aries
ENSSARG00000009740	SRBD1	100	78.492	ENSPPAG00000038442	SRBD1	100	78.492	Pan_paniscus
ENSSARG00000009740	SRBD1	100	80.000	ENSPPRG00000003449	SRBD1	100	80.000	Panthera_pardus
ENSSARG00000009740	SRBD1	100	80.101	ENSPTIG00000012495	SRBD1	100	80.101	Panthera_tigris_altaica
ENSSARG00000009740	SRBD1	100	78.593	ENSPTRG00000011889	SRBD1	100	78.593	Pan_troglodytes
ENSSARG00000009740	SRBD1	100	78.693	ENSPANG00000008063	SRBD1	100	78.693	Papio_anubis
ENSSARG00000009740	SRBD1	96	53.098	ENSPKIG00000021973	si:ch211-117n7.8	94	53.098	Paramormyrops_kingsleyae
ENSSARG00000009740	SRBD1	100	65.861	ENSPSIG00000008992	SRBD1	100	66.935	Pelodiscus_sinensis
ENSSARG00000009740	SRBD1	90	49.391	ENSPMGG00000013348	si:ch211-117n7.8	98	47.737	Periophthalmus_magnuspinnatus
ENSSARG00000009740	SRBD1	100	74.628	ENSPEMG00000020684	Srbd1	100	74.628	Peromyscus_maniculatus_bairdii
ENSSARG00000009740	SRBD1	96	50.470	ENSPFOG00000010650	si:ch211-117n7.8	93	50.470	Poecilia_formosa
ENSSARG00000009740	SRBD1	96	50.366	ENSPLAG00000002141	si:ch211-117n7.8	93	50.366	Poecilia_latipinna
ENSSARG00000009740	SRBD1	96	50.575	ENSPMEG00000018537	si:ch211-117n7.8	93	50.575	Poecilia_mexicana
ENSSARG00000009740	SRBD1	85	53.546	ENSPREG00000003258	si:ch211-117n7.8	85	53.546	Poecilia_reticulata
ENSSARG00000009740	SRBD1	100	71.754	ENSPPYG00000012444	SRBD1	99	71.754	Pongo_abelii
ENSSARG00000009740	SRBD1	75	89.474	ENSPCAG00000005629	SRBD1	77	89.474	Procavia_capensis
ENSSARG00000009740	SRBD1	100	67.868	ENSPCOG00000017669	SRBD1	100	67.868	Propithecus_coquereli
ENSSARG00000009740	SRBD1	100	69.246	ENSPVAG00000001782	SRBD1	100	69.246	Pteropus_vampyrus
ENSSARG00000009740	SRBD1	96	47.604	ENSPNYG00000000508	si:ch211-117n7.8	96	47.932	Pundamilia_nyererei
ENSSARG00000009740	SRBD1	95	52.828	ENSPNAG00000013492	SRBD1	93	53.098	Pygocentrus_nattereri
ENSSARG00000009740	SRBD1	100	74.367	ENSRNOG00000014720	Srbd1	99	74.772	Rattus_norvegicus
ENSSARG00000009740	SRBD1	99	78.449	ENSRBIG00000033486	SRBD1	99	78.449	Rhinopithecus_bieti
ENSSARG00000009740	SRBD1	99	78.449	ENSRROG00000041599	SRBD1	99	78.449	Rhinopithecus_roxellana
ENSSARG00000009740	SRBD1	100	77.487	ENSSBOG00000024982	SRBD1	100	77.487	Saimiri_boliviensis_boliviensis
ENSSARG00000009740	SRBD1	94	52.183	ENSSFOG00015001128	si:ch211-117n7.8	99	52.183	Scleropages_formosus
ENSSARG00000009740	SRBD1	85	52.656	ENSSMAG00000018256	si:ch211-117n7.8	82	53.081	Scophthalmus_maximus
ENSSARG00000009740	SRBD1	85	53.018	ENSSLDG00000023189	si:ch211-117n7.8	83	53.018	Seriola_lalandi_dorsalis
ENSSARG00000009740	SRBD1	89	70.311	ENSSPUG00000010475	SRBD1	100	67.308	Sphenodon_punctatus
ENSSARG00000009740	SRBD1	90	49.291	ENSSPAG00000008092	-	95	48.209	Stegastes_partitus
ENSSARG00000009740	SRBD1	100	79.618	ENSSSCG00000008445	SRBD1	98	79.618	Sus_scrofa
ENSSARG00000009740	SRBD1	85	71.342	ENSTGUG00000003878	SRBD1	99	71.342	Taeniopygia_guttata
ENSSARG00000009740	SRBD1	93	49.728	ENSTRUG00000007080	si:ch211-117n7.8	99	50.163	Takifugu_rubripes
ENSSARG00000009740	SRBD1	98	47.676	ENSTNIG00000007464	si:ch211-117n7.8	95	48.152	Tetraodon_nigroviridis
ENSSARG00000009740	SRBD1	74	98.936	ENSTBEG00000004556	SRBD1	68	98.936	Tupaia_belangeri
ENSSARG00000009740	SRBD1	94	82.949	ENSTTRG00000011871	SRBD1	94	82.949	Tursiops_truncatus
ENSSARG00000009740	SRBD1	100	79.518	ENSUAMG00000008126	SRBD1	97	85.145	Ursus_americanus
ENSSARG00000009740	SRBD1	100	79.618	ENSUMAG00000012902	SRBD1	98	79.618	Ursus_maritimus
ENSSARG00000009740	SRBD1	92	81.236	ENSVPAG00000006825	SRBD1	100	81.236	Vicugna_pacos
ENSSARG00000009740	SRBD1	94	89.873	ENSVVUG00000005389	SRBD1	99	89.873	Vulpes_vulpes
ENSSARG00000009740	SRBD1	100	47.287	ENSXETG00000002760	srbd1	100	47.665	Xenopus_tropicalis
ENSSARG00000009740	SRBD1	85	53.191	ENSXMAG00000016861	si:ch211-117n7.8	83	53.073	Xiphophorus_maculatus