EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000009994 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 56849 bases
Position: chrGeneScaffold_3678:24928-81776
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000009070	RRM_1	PF00076.22	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000010026	SCAF4-201	3444	-	ENSSARP00000009070	1147 (aa)	-	UPI00015813C2

Gene Model

Click here to download ENSSARG00000009994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000009994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000009994	SCAF4	100	89.177	ENSG00000156304	SCAF4	100	89.004	Homo_sapiens
ENSSARG00000009994	SCAF4	73	89.260	ENSAMEG00000014987	SCAF4	97	89.180	Ailuropoda_melanoleuca
ENSSARG00000009994	SCAF4	99	73.547	ENSAPLG00000002509	SCAF4	59	82.298	Anas_platyrhynchos
ENSSARG00000009994	SCAF4	96	68.056	ENSACAG00000002569	SCAF4	50	87.742	Anolis_carolinensis
ENSSARG00000009994	SCAF4	100	89.177	ENSANAG00000037494	SCAF4	100	88.658	Aotus_nancymaae
ENSSARG00000009994	SCAF4	93	49.283	ENSAMXG00000008585	scaf4a	60	62.861	Astyanax_mexicanus
ENSSARG00000009994	SCAF4	100	89.351	ENSBTAG00000018855	SCAF4	100	89.264	Bos_taurus
ENSSARG00000009994	SCAF4	100	89.168	ENSCJAG00000008993	SCAF4	99	92.317	Callithrix_jacchus
ENSSARG00000009994	SCAF4	99	90.009	ENSCAFG00000008863	SCAF4	99	89.658	Canis_familiaris
ENSSARG00000009994	SCAF4	99	88.028	ENSCAFG00020026019	SCAF4	100	88.496	Canis_lupus_dingo
ENSSARG00000009994	SCAF4	100	88.956	ENSCHIG00000008385	SCAF4	100	88.611	Capra_hircus
ENSSARG00000009994	SCAF4	90	92.800	ENSTSYG00000011344	SCAF4	98	92.782	Carlito_syrichta
ENSSARG00000009994	SCAF4	100	86.145	ENSCPOG00000012443	SCAF4	100	85.542	Cavia_porcellus
ENSSARG00000009994	SCAF4	100	88.995	ENSCCAG00000033727	SCAF4	100	89.601	Cebus_capucinus
ENSSARG00000009994	SCAF4	100	88.918	ENSCATG00000030379	SCAF4	100	90.009	Cercocebus_atys
ENSSARG00000009994	SCAF4	99	86.730	ENSCLAG00000006298	SCAF4	100	87.251	Chinchilla_lanigera
ENSSARG00000009994	SCAF4	100	89.446	ENSCSAG00000009438	SCAF4	100	89.360	Chlorocebus_sabaeus
ENSSARG00000009994	SCAF4	100	88.918	ENSCANG00000029847	SCAF4	100	89.177	Colobus_angolensis_palliatus
ENSSARG00000009994	SCAF4	99	79.951	ENSCGRG00001020821	Scaf4	98	81.764	Cricetulus_griseus_chok1gshd
ENSSARG00000009994	SCAF4	99	79.721	ENSCGRG00000014360	Scaf4	99	82.262	Cricetulus_griseus_crigri
ENSSARG00000009994	SCAF4	64	45.283	ENSCSEG00000012808	-	60	59.799	Cynoglossus_semilaevis
ENSSARG00000009994	SCAF4	100	85.875	ENSDNOG00000019014	SCAF4	94	86.308	Dasypus_novemcinctus
ENSSARG00000009994	SCAF4	96	76.682	ENSETEG00000000583	SCAF4	99	75.044	Echinops_telfairi
ENSSARG00000009994	SCAF4	100	89.757	ENSEASG00005007756	SCAF4	100	90.191	Equus_asinus_asinus
ENSSARG00000009994	SCAF4	100	89.931	ENSECAG00000014248	SCAF4	100	90.278	Equus_caballus
ENSSARG00000009994	SCAF4	59	51.485	ENSELUG00000002779	SCAF8	61	67.391	Esox_lucius
ENSSARG00000009994	SCAF4	100	89.119	ENSFCAG00000002228	SCAF4	100	89.724	Felis_catus
ENSSARG00000009994	SCAF4	99	84.833	ENSFDAG00000017780	SCAF4	100	85.090	Fukomys_damarensis
ENSSARG00000009994	SCAF4	100	74.913	ENSGALG00000033965	SCAF4	59	82.689	Gallus_gallus
ENSSARG00000009994	SCAF4	91	87.879	ENSGGOG00000015557	SCAF4	99	91.118	Gorilla_gorilla
ENSSARG00000009994	SCAF4	100	85.959	ENSHGLG00000010582	SCAF4	100	86.815	Heterocephalus_glaber_female
ENSSARG00000009994	SCAF4	99	86.049	ENSHGLG00100009441	SCAF4	100	86.915	Heterocephalus_glaber_male
ENSSARG00000009994	SCAF4	99	82.548	ENSSTOG00000004450	SCAF4	100	83.072	Ictidomys_tridecemlineatus
ENSSARG00000009994	SCAF4	99	86.165	ENSJJAG00000019447	Scaf4	99	86.602	Jaculus_jaculus
ENSSARG00000009994	SCAF4	96	60.699	ENSLACG00000013913	SCAF4	58	69.475	Latimeria_chalumnae
ENSSARG00000009994	SCAF4	95	55.859	ENSLOCG00000009162	scaf4a	59	66.816	Lepisosteus_oculatus
ENSSARG00000009994	SCAF4	99	87.815	ENSLAFG00000010710	SCAF4	100	88.686	Loxodonta_africana
ENSSARG00000009994	SCAF4	100	89.351	ENSMFAG00000037668	SCAF4	100	89.524	Macaca_fascicularis
ENSSARG00000009994	SCAF4	100	89.264	ENSMMUG00000001712	SCAF4	100	89.437	Macaca_mulatta
ENSSARG00000009994	SCAF4	100	89.360	ENSMNEG00000032966	SCAF4	100	89.446	Macaca_nemestrina
ENSSARG00000009994	SCAF4	99	89.345	ENSMLEG00000039674	SCAF4	100	89.607	Mandrillus_leucophaeus
ENSSARG00000009994	SCAF4	99	74.739	ENSMGAG00000014515	SCAF4	58	83.072	Meleagris_gallopavo
ENSSARG00000009994	SCAF4	99	86.778	ENSMAUG00000013307	Scaf4	100	86.515	Mesocricetus_auratus
ENSSARG00000009994	SCAF4	100	89.419	ENSMICG00000005256	SCAF4	100	90.113	Microcebus_murinus
ENSSARG00000009994	SCAF4	98	86.815	ENSMOCG00000012087	Scaf4	99	83.492	Microtus_ochrogaster
ENSSARG00000009994	SCAF4	100	81.944	ENSMODG00000021040	SCAF4	99	81.517	Monodelphis_domestica
ENSSARG00000009994	SCAF4	99	86.445	MGP_CAROLIEiJ_G0020944	Scaf4	99	83.155	Mus_caroli
ENSSARG00000009994	SCAF4	99	79.870	ENSMUSG00000022983	Scaf4	98	81.723	Mus_musculus
ENSSARG00000009994	SCAF4	99	79.058	MGP_PahariEiJ_G0016649	Scaf4	97	83.029	Mus_pahari
ENSSARG00000009994	SCAF4	99	80.442	MGP_SPRETEiJ_G0021850	Scaf4	97	81.984	Mus_spretus
ENSSARG00000009994	SCAF4	100	89.100	ENSMPUG00000001078	SCAF4	100	89.446	Mustela_putorius_furo
ENSSARG00000009994	SCAF4	99	75.851	ENSMLUG00000011472	SCAF4	79	81.828	Myotis_lucifugus
ENSSARG00000009994	SCAF4	99	86.372	ENSNGAG00000005214	Scaf4	99	86.870	Nannospalax_galili
ENSSARG00000009994	SCAF4	100	88.918	ENSNLEG00000003569	SCAF4	100	88.831	Nomascus_leucogenys
ENSSARG00000009994	SCAF4	88	86.000	ENSOPRG00000007016	SCAF4	77	87.500	Ochotona_princeps
ENSSARG00000009994	SCAF4	100	85.047	ENSODEG00000002718	SCAF4	100	85.132	Octodon_degus
ENSSARG00000009994	SCAF4	100	86.022	ENSOCUG00000008336	SCAF4	100	85.418	Oryctolagus_cuniculus
ENSSARG00000009994	SCAF4	99	89.388	ENSOGAG00000014653	SCAF4	94	90.137	Otolemur_garnettii
ENSSARG00000009994	SCAF4	99	88.773	ENSOARG00000013894	SCAF4	99	88.332	Ovis_aries
ENSSARG00000009994	SCAF4	100	89.177	ENSPPAG00000028535	SCAF4	100	89.004	Pan_paniscus
ENSSARG00000009994	SCAF4	99	89.442	ENSPPRG00000000635	SCAF4	100	89.616	Panthera_pardus
ENSSARG00000009994	SCAF4	99	87.303	ENSPTIG00000021578	SCAF4	99	84.201	Panthera_tigris_altaica
ENSSARG00000009994	SCAF4	100	89.177	ENSPTRG00000013848	SCAF4	100	89.004	Pan_troglodytes
ENSSARG00000009994	SCAF4	100	89.610	ENSPANG00000017332	SCAF4	100	89.784	Papio_anubis
ENSSARG00000009994	SCAF4	64	63.648	ENSPKIG00000022408	scaf4a	90	65.309	Paramormyrops_kingsleyae
ENSSARG00000009994	SCAF4	60	86.397	ENSPCIG00000028183	SCAF4	91	79.895	Phascolarctos_cinereus
ENSSARG00000009994	SCAF4	100	89.437	ENSPPYG00000011355	SCAF4	100	89.220	Pongo_abelii
ENSSARG00000009994	SCAF4	100	88.995	ENSPCOG00000018710	SCAF4	100	90.295	Propithecus_coquereli
ENSSARG00000009994	SCAF4	100	89.236	ENSPVAG00000005220	SCAF4	100	89.062	Pteropus_vampyrus
ENSSARG00000009994	SCAF4	76	58.465	ENSPNAG00000016892	scaf4a	60	64.511	Pygocentrus_nattereri
ENSSARG00000009994	SCAF4	98	82.620	ENSRNOG00000002104	Scaf4	97	82.245	Rattus_norvegicus
ENSSARG00000009994	SCAF4	99	88.116	ENSRBIG00000040007	SCAF4	99	87.325	Rhinopithecus_bieti
ENSSARG00000009994	SCAF4	100	89.610	ENSRROG00000029488	SCAF4	100	89.524	Rhinopithecus_roxellana
ENSSARG00000009994	SCAF4	100	81.217	ENSSHAG00000001581	SCAF4	98	82.348	Sarcophilus_harrisii
ENSSARG00000009994	SCAF4	65	54.268	ENSSFOG00015006338	scaf4a	54	58.303	Scleropages_formosus
ENSSARG00000009994	SCAF4	65	56.270	ENSSDUG00000012380	scaf4b	51	76.978	Seriola_dumerili
ENSSARG00000009994	SCAF4	100	86.661	ENSSSCG00000021023	SCAF4	100	87.005	Sus_scrofa
ENSSARG00000009994	SCAF4	74	71.459	ENSTGUG00000013464	SCAF4	57	84.899	Taeniopygia_guttata
ENSSARG00000009994	SCAF4	99	88.957	ENSTTRG00000010963	SCAF4	100	88.957	Tursiops_truncatus
ENSSARG00000009994	SCAF4	100	87.315	ENSUAMG00000008860	SCAF4	100	87.837	Ursus_americanus
ENSSARG00000009994	SCAF4	99	88.183	ENSUMAG00000016962	SCAF4	100	88.624	Ursus_maritimus
ENSSARG00000009994	SCAF4	99	90.053	ENSVVUG00000002953	SCAF4	100	89.701	Vulpes_vulpes
ENSSARG00000009994	SCAF4	99	53.725	ENSXETG00000007351	scaf4	62	62.302	Xenopus_tropicalis