EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000010344 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 16304 bases
Position: chrGeneScaffold_2465:2936-19239
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000009350	TRM13	PF05206.14	1e-70	1	1
ENSSARP00000009350	zf-U11-48K	PF05253.12	1.3e-09	1	1
ENSSARP00000009350	zf-TRM13_CCCH	PF11722.8	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000010338	TRMT13-201	1428	-	ENSSARP00000009350	475 (aa)	-	UPI0001580D96

Gene Model

Click here to download ENSSARG00000010344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000010344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000010344	TRMT13	97	77.273	ENSG00000122435	TRMT13	85	90.323	Homo_sapiens
ENSSARG00000010344	TRMT13	87	56.707	ENSAPOG00000015131	trmt13	86	56.983	Acanthochromis_polyacanthus
ENSSARG00000010344	TRMT13	99	76.987	ENSAMEG00000008917	TRMT13	99	76.987	Ailuropoda_melanoleuca
ENSSARG00000010344	TRMT13	96	47.505	ENSACIG00000005804	trmt13	94	50.370	Amphilophus_citrinellus
ENSSARG00000010344	TRMT13	87	56.707	ENSAOCG00000023585	trmt13	84	56.983	Amphiprion_ocellaris
ENSSARG00000010344	TRMT13	87	56.707	ENSAPEG00000004025	trmt13	84	56.983	Amphiprion_percula
ENSSARG00000010344	TRMT13	97	45.474	ENSATEG00000006597	trmt13	97	45.474	Anabas_testudineus
ENSSARG00000010344	TRMT13	89	61.502	ENSAPLG00000014924	TRMT13	99	61.502	Anas_platyrhynchos
ENSSARG00000010344	TRMT13	99	56.871	ENSACAG00000003498	TRMT13	100	56.871	Anolis_carolinensis
ENSSARG00000010344	TRMT13	99	75.789	ENSANAG00000019525	TRMT13	97	84.906	Aotus_nancymaae
ENSSARG00000010344	TRMT13	99	48.225	ENSACLG00000020018	trmt13	100	48.225	Astatotilapia_calliptera
ENSSARG00000010344	TRMT13	96	50.108	ENSAMXG00000017963	trmt13	97	50.108	Astyanax_mexicanus
ENSSARG00000010344	TRMT13	99	77.263	ENSBTAG00000015781	TRMT13	99	77.263	Bos_taurus
ENSSARG00000010344	TRMT13	99	75.158	ENSCJAG00000000200	TRMT13	96	84.906	Callithrix_jacchus
ENSSARG00000010344	TRMT13	66	74.038	ENSCAFG00000020021	TRMT13	98	74.038	Canis_familiaris
ENSSARG00000010344	TRMT13	56	74.359	ENSCAFG00020011572	TRMT13	95	74.359	Canis_lupus_dingo
ENSSARG00000010344	TRMT13	99	77.197	ENSCHIG00000015395	TRMT13	99	77.197	Capra_hircus
ENSSARG00000010344	TRMT13	100	68.344	ENSTSYG00000010811	TRMT13	99	86.275	Carlito_syrichta
ENSSARG00000010344	TRMT13	55	74.227	ENSCAPG00000009085	TRMT13	100	56.749	Cavia_aperea
ENSSARG00000010344	TRMT13	99	75.732	ENSCPOG00000000694	TRMT13	99	75.732	Cavia_porcellus
ENSSARG00000010344	TRMT13	99	75.789	ENSCCAG00000023772	TRMT13	97	83.962	Cebus_capucinus
ENSSARG00000010344	TRMT13	99	76.211	ENSCATG00000033556	TRMT13	97	84.906	Cercocebus_atys
ENSSARG00000010344	TRMT13	89	72.170	ENSCLAG00000008220	TRMT13	99	72.170	Chinchilla_lanigera
ENSSARG00000010344	TRMT13	99	76.211	ENSCSAG00000001506	TRMT13	99	76.211	Chlorocebus_sabaeus
ENSSARG00000010344	TRMT13	99	63.235	ENSCPBG00000026671	TRMT13	99	63.235	Chrysemys_picta_bellii
ENSSARG00000010344	TRMT13	99	76.421	ENSCANG00000034659	TRMT13	97	85.849	Colobus_angolensis_palliatus
ENSSARG00000010344	TRMT13	99	73.774	ENSCGRG00001021601	Trmt13	97	73.774	Cricetulus_griseus_chok1gshd
ENSSARG00000010344	TRMT13	53	76.680	ENSCGRG00000000093	-	98	76.680	Cricetulus_griseus_crigri
ENSSARG00000010344	TRMT13	98	44.540	ENSCSEG00000000591	trmt13	97	44.540	Cynoglossus_semilaevis
ENSSARG00000010344	TRMT13	98	43.505	ENSCVAG00000017342	trmt13	94	44.742	Cyprinodon_variegatus
ENSSARG00000010344	TRMT13	96	51.087	ENSDARG00000102846	trmt13	95	51.087	Danio_rerio
ENSSARG00000010344	TRMT13	55	73.485	ENSDNOG00000001710	TRMT13	80	73.485	Dasypus_novemcinctus
ENSSARG00000010344	TRMT13	99	72.899	ENSDORG00000015808	Trmt13	99	72.899	Dipodomys_ordii
ENSSARG00000010344	TRMT13	98	63.789	ENSETEG00000005819	TRMT13	98	63.789	Echinops_telfairi
ENSSARG00000010344	TRMT13	96	42.333	ENSEBUG00000014444	trmt13	96	42.333	Eptatretus_burgeri
ENSSARG00000010344	TRMT13	99	78.452	ENSEASG00005015918	TRMT13	99	78.452	Equus_asinus_asinus
ENSSARG00000010344	TRMT13	99	78.452	ENSECAG00000022626	TRMT13	99	78.452	Equus_caballus
ENSSARG00000010344	TRMT13	77	84.375	ENSEEUG00000000294	TRMT13	77	84.375	Erinaceus_europaeus
ENSSARG00000010344	TRMT13	96	49.356	ENSELUG00000003803	trmt13	97	50.213	Esox_lucius
ENSSARG00000010344	TRMT13	99	77.474	ENSFCAG00000030618	TRMT13	97	85.849	Felis_catus
ENSSARG00000010344	TRMT13	99	61.064	ENSFALG00000002424	TRMT13	98	61.064	Ficedula_albicollis
ENSSARG00000010344	TRMT13	99	75.417	ENSFDAG00000006342	TRMT13	99	75.417	Fukomys_damarensis
ENSSARG00000010344	TRMT13	81	45.614	ENSFHEG00000022954	trmt13	98	45.610	Fundulus_heteroclitus
ENSSARG00000010344	TRMT13	96	43.736	ENSGMOG00000013223	trmt13	100	44.396	Gadus_morhua
ENSSARG00000010344	TRMT13	96	59.692	ENSGALG00000005290	TRMT13	97	59.052	Gallus_gallus
ENSSARG00000010344	TRMT13	75	44.837	ENSGAFG00000001577	trmt13	80	44.837	Gambusia_affinis
ENSSARG00000010344	TRMT13	99	45.912	ENSGACG00000013428	trmt13	99	46.849	Gasterosteus_aculeatus
ENSSARG00000010344	TRMT13	97	64.719	ENSGAGG00000023303	TRMT13	96	64.719	Gopherus_agassizii
ENSSARG00000010344	TRMT13	97	76.840	ENSGGOG00000005616	TRMT13	85	89.247	Gorilla_gorilla
ENSSARG00000010344	TRMT13	99	48.536	ENSHBUG00000007754	trmt13	100	48.536	Haplochromis_burtoni
ENSSARG00000010344	TRMT13	99	75.833	ENSHGLG00000002164	TRMT13	99	75.833	Heterocephalus_glaber_female
ENSSARG00000010344	TRMT13	99	75.833	ENSHGLG00100001618	TRMT13	99	75.833	Heterocephalus_glaber_male
ENSSARG00000010344	TRMT13	98	41.387	ENSHCOG00000020553	trmt13	98	41.387	Hippocampus_comes
ENSSARG00000010344	TRMT13	98	50.426	ENSIPUG00000024787	trmt13	100	50.955	Ictalurus_punctatus
ENSSARG00000010344	TRMT13	99	77.966	ENSSTOG00000013483	TRMT13	98	77.966	Ictidomys_tridecemlineatus
ENSSARG00000010344	TRMT13	99	74.473	ENSJJAG00000018012	Trmt13	99	74.473	Jaculus_jaculus
ENSSARG00000010344	TRMT13	66	43.533	ENSKMAG00000007639	trmt13	93	43.533	Kryptolebias_marmoratus
ENSSARG00000010344	TRMT13	99	45.756	ENSLBEG00000020238	trmt13	100	46.502	Labrus_bergylta
ENSSARG00000010344	TRMT13	96	56.798	ENSLACG00000013153	TRMT13	99	54.156	Latimeria_chalumnae
ENSSARG00000010344	TRMT13	96	52.851	ENSLOCG00000000418	trmt13	96	52.851	Lepisosteus_oculatus
ENSSARG00000010344	TRMT13	78	71.892	ENSLAFG00000002383	TRMT13	100	71.892	Loxodonta_africana
ENSSARG00000010344	TRMT13	99	76.421	ENSMFAG00000034681	TRMT13	97	85.849	Macaca_fascicularis
ENSSARG00000010344	TRMT13	99	76.421	ENSMMUG00000004243	TRMT13	97	85.849	Macaca_mulatta
ENSSARG00000010344	TRMT13	99	76.421	ENSMNEG00000036102	TRMT13	97	85.849	Macaca_nemestrina
ENSSARG00000010344	TRMT13	99	76.211	ENSMLEG00000034258	TRMT13	97	84.906	Mandrillus_leucophaeus
ENSSARG00000010344	TRMT13	99	46.960	ENSMAMG00000016597	trmt13	99	46.960	Mastacembelus_armatus
ENSSARG00000010344	TRMT13	99	48.017	ENSMZEG00005020959	trmt13	100	48.017	Maylandia_zebra
ENSSARG00000010344	TRMT13	89	60.520	ENSMGAG00000006970	TRMT13	99	60.520	Meleagris_gallopavo
ENSSARG00000010344	TRMT13	97	74.074	ENSMAUG00000010448	Trmt13	95	74.074	Mesocricetus_auratus
ENSSARG00000010344	TRMT13	99	76.987	ENSMICG00000005283	TRMT13	100	86.239	Microcebus_murinus
ENSSARG00000010344	TRMT13	99	70.316	ENSMOCG00000019914	Trmt13	99	70.316	Microtus_ochrogaster
ENSSARG00000010344	TRMT13	56	41.176	ENSMMOG00000007762	trmt13	90	41.176	Mola_mola
ENSSARG00000010344	TRMT13	98	70.085	ENSMODG00000003646	TRMT13	96	70.085	Monodelphis_domestica
ENSSARG00000010344	TRMT13	99	46.751	ENSMALG00000020965	trmt13	98	46.383	Monopterus_albus
ENSSARG00000010344	TRMT13	99	73.093	MGP_CAROLIEiJ_G0025568	Trmt13	86	86.093	Mus_caroli
ENSSARG00000010344	TRMT13	97	74.348	ENSMUSG00000033439	Trmt13	86	86.093	Mus_musculus
ENSSARG00000010344	TRMT13	99	73.362	MGP_PahariEiJ_G0027014	Trmt13	86	86.093	Mus_pahari
ENSSARG00000010344	TRMT13	99	73.517	MGP_SPRETEiJ_G0026518	Trmt13	87	85.621	Mus_spretus
ENSSARG00000010344	TRMT13	80	73.280	ENSMPUG00000002078	-	99	73.280	Mustela_putorius_furo
ENSSARG00000010344	TRMT13	99	68.619	ENSMLUG00000002124	TRMT13	99	68.619	Myotis_lucifugus
ENSSARG00000010344	TRMT13	99	44.492	ENSNBRG00000006783	trmt13	98	44.374	Neolamprologus_brichardi
ENSSARG00000010344	TRMT13	97	76.840	ENSNLEG00000035917	TRMT13	85	91.398	Nomascus_leucogenys
ENSSARG00000010344	TRMT13	51	61.290	ENSMEUG00000013346	-	100	61.290	Notamacropus_eugenii
ENSSARG00000010344	TRMT13	65	82.222	ENSOPRG00000012048	TRMT13	65	82.222	Ochotona_princeps
ENSSARG00000010344	TRMT13	99	47.917	ENSONIG00000004574	trmt13	100	47.917	Oreochromis_niloticus
ENSSARG00000010344	TRMT13	91	63.594	ENSOANG00000012057	TRMT13	100	63.594	Ornithorhynchus_anatinus
ENSSARG00000010344	TRMT13	99	76.421	ENSOCUG00000023095	TRMT13	99	76.421	Oryctolagus_cuniculus
ENSSARG00000010344	TRMT13	97	42.060	ENSORLG00000003320	trmt13	98	42.704	Oryzias_latipes
ENSSARG00000010344	TRMT13	96	42.299	ENSORLG00020005972	trmt13	96	42.048	Oryzias_latipes_hni
ENSSARG00000010344	TRMT13	97	46.996	ENSORLG00015002270	trmt13	98	46.996	Oryzias_latipes_hsok
ENSSARG00000010344	TRMT13	99	46.429	ENSOMEG00000006724	trmt13	95	46.849	Oryzias_melastigma
ENSSARG00000010344	TRMT13	98	78.224	ENSOGAG00000005618	TRMT13	96	78.243	Otolemur_garnettii
ENSSARG00000010344	TRMT13	99	77.197	ENSOARG00000017983	TRMT13	99	77.197	Ovis_aries
ENSSARG00000010344	TRMT13	97	76.623	ENSPPAG00000043736	TRMT13	85	90.323	Pan_paniscus
ENSSARG00000010344	TRMT13	99	77.684	ENSPPRG00000003424	TRMT13	97	85.849	Panthera_pardus
ENSSARG00000010344	TRMT13	99	77.684	ENSPTIG00000018598	TRMT13	97	85.849	Panthera_tigris_altaica
ENSSARG00000010344	TRMT13	97	76.623	ENSPTRG00000001001	TRMT13	85	90.323	Pan_troglodytes
ENSSARG00000010344	TRMT13	99	76.632	ENSPANG00000007598	TRMT13	97	85.849	Papio_anubis
ENSSARG00000010344	TRMT13	97	51.398	ENSPKIG00000001514	trmt13	98	51.398	Paramormyrops_kingsleyae
ENSSARG00000010344	TRMT13	88	62.590	ENSPSIG00000012703	TRMT13	99	62.590	Pelodiscus_sinensis
ENSSARG00000010344	TRMT13	99	47.899	ENSPMGG00000013298	trmt13	94	47.899	Periophthalmus_magnuspinnatus
ENSSARG00000010344	TRMT13	97	71.304	ENSPEMG00000000275	Trmt13	96	71.304	Peromyscus_maniculatus_bairdii
ENSSARG00000010344	TRMT13	95	41.949	ENSPMAG00000000823	trmt13	98	41.788	Petromyzon_marinus
ENSSARG00000010344	TRMT13	99	68.421	ENSPCIG00000007699	TRMT13	99	69.053	Phascolarctos_cinereus
ENSSARG00000010344	TRMT13	97	43.601	ENSPFOG00000008675	trmt13	96	43.601	Poecilia_formosa
ENSSARG00000010344	TRMT13	98	43.187	ENSPLAG00000009709	trmt13	99	43.187	Poecilia_latipinna
ENSSARG00000010344	TRMT13	98	42.558	ENSPMEG00000022954	trmt13	99	42.558	Poecilia_mexicana
ENSSARG00000010344	TRMT13	80	45.244	ENSPREG00000005645	trmt13	92	42.456	Poecilia_reticulata
ENSSARG00000010344	TRMT13	97	77.273	ENSPPYG00000001120	TRMT13	96	77.273	Pongo_abelii
ENSSARG00000010344	TRMT13	99	75.105	ENSPCAG00000002340	TRMT13	99	75.105	Procavia_capensis
ENSSARG00000010344	TRMT13	99	75.941	ENSPCOG00000017984	TRMT13	100	84.404	Propithecus_coquereli
ENSSARG00000010344	TRMT13	99	78.033	ENSPVAG00000017430	TRMT13	99	78.033	Pteropus_vampyrus
ENSSARG00000010344	TRMT13	99	47.071	ENSPNYG00000013690	trmt13	100	47.071	Pundamilia_nyererei
ENSSARG00000010344	TRMT13	96	50.433	ENSPNAG00000022130	trmt13	97	50.433	Pygocentrus_nattereri
ENSSARG00000010344	TRMT13	97	74.026	ENSRNOG00000015140	Trmt13	93	74.026	Rattus_norvegicus
ENSSARG00000010344	TRMT13	99	76.421	ENSRBIG00000037686	TRMT13	97	85.849	Rhinopithecus_bieti
ENSSARG00000010344	TRMT13	99	76.421	ENSRROG00000044057	TRMT13	97	85.849	Rhinopithecus_roxellana
ENSSARG00000010344	TRMT13	83	32.973	YOL125W	-	78	32.973	Saccharomyces_cerevisiae
ENSSARG00000010344	TRMT13	99	75.789	ENSSBOG00000026541	TRMT13	97	84.906	Saimiri_boliviensis_boliviensis
ENSSARG00000010344	TRMT13	91	67.972	ENSSHAG00000005213	TRMT13	96	67.972	Sarcophilus_harrisii
ENSSARG00000010344	TRMT13	97	48.707	ENSSFOG00015017560	trmt13	97	49.241	Scleropages_formosus
ENSSARG00000010344	TRMT13	97	46.008	ENSSMAG00000014592	trmt13	96	46.008	Scophthalmus_maximus
ENSSARG00000010344	TRMT13	98	46.122	ENSSDUG00000015508	trmt13	97	46.263	Seriola_dumerili
ENSSARG00000010344	TRMT13	98	45.868	ENSSLDG00000019060	trmt13	96	45.868	Seriola_lalandi_dorsalis
ENSSARG00000010344	TRMT13	96	61.926	ENSSPUG00000016339	TRMT13	99	61.926	Sphenodon_punctatus
ENSSARG00000010344	TRMT13	98	47.679	ENSSPAG00000011922	trmt13	99	47.808	Stegastes_partitus
ENSSARG00000010344	TRMT13	99	78.288	ENSSSCG00000006869	TRMT13	99	78.288	Sus_scrofa
ENSSARG00000010344	TRMT13	98	60.000	ENSTGUG00000005253	TRMT13	99	60.000	Taeniopygia_guttata
ENSSARG00000010344	TRMT13	97	44.421	ENSTRUG00000008400	trmt13	99	44.928	Takifugu_rubripes
ENSSARG00000010344	TRMT13	67	82.500	ENSTBEG00000008911	TRMT13	78	82.500	Tupaia_belangeri
ENSSARG00000010344	TRMT13	50	95.775	ENSTTRG00000015302	-	59	95.775	Tursiops_truncatus
ENSSARG00000010344	TRMT13	99	72.176	ENSUAMG00000017251	TRMT13	99	72.176	Ursus_americanus
ENSSARG00000010344	TRMT13	99	76.778	ENSUMAG00000007901	TRMT13	99	77.156	Ursus_maritimus
ENSSARG00000010344	TRMT13	90	62.207	ENSVPAG00000001034	TRMT13	99	62.207	Vicugna_pacos
ENSSARG00000010344	TRMT13	99	77.244	ENSVVUG00000021996	TRMT13	99	77.244	Vulpes_vulpes
ENSSARG00000010344	TRMT13	98	51.599	ENSXETG00000013204	trmt13	99	51.599	Xenopus_tropicalis
ENSSARG00000010344	TRMT13	96	43.777	ENSXMAG00000010765	trmt13	98	43.777	Xiphophorus_maculatus