EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000010724 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 35664 bases
Position: chrGeneScaffold_2678:2623-38286
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000009686	RRM_1	PF00076.22	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000010723	RBM42-201	1443	-	ENSSARP00000009686	480 (aa)	-	UPI00015814E7

Gene Model

Click here to download ENSSARG00000010724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000010724's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000010724	RBM42	100	87.708	ENSG00000126254	RBM42	100	87.708	Homo_sapiens
ENSSARG00000010724	RBM42	100	87.137	ENSAMEG00000000524	RBM42	100	87.137	Ailuropoda_melanoleuca
ENSSARG00000010724	RBM42	65	79.885	ENSACAG00000005495	RBM42	68	92.593	Anolis_carolinensis
ENSSARG00000010724	RBM42	100	87.083	ENSANAG00000027537	RBM42	100	87.083	Aotus_nancymaae
ENSSARG00000010724	RBM42	100	87.292	ENSBTAG00000013440	RBM42	100	87.292	Bos_taurus
ENSSARG00000010724	RBM42	100	85.833	ENSCJAG00000010220	RBM42	100	85.833	Callithrix_jacchus
ENSSARG00000010724	RBM42	100	81.042	ENSCAFG00020018628	RBM42	95	80.702	Canis_lupus_dingo
ENSSARG00000010724	RBM42	100	86.667	ENSCHIG00000009518	RBM42	100	86.667	Capra_hircus
ENSSARG00000010724	RBM42	100	86.902	ENSTSYG00000014688	RBM42	100	86.902	Carlito_syrichta
ENSSARG00000010724	RBM42	80	97.668	ENSCAPG00000009566	RBM42	99	97.668	Cavia_aperea
ENSSARG00000010724	RBM42	100	87.292	ENSCPOG00000012365	RBM42	99	87.292	Cavia_porcellus
ENSSARG00000010724	RBM42	100	87.500	ENSCCAG00000034440	RBM42	100	87.500	Cebus_capucinus
ENSSARG00000010724	RBM42	100	87.500	ENSCATG00000041924	RBM42	100	87.500	Cercocebus_atys
ENSSARG00000010724	RBM42	100	87.292	ENSCLAG00000012865	RBM42	99	87.292	Chinchilla_lanigera
ENSSARG00000010724	RBM42	100	81.667	ENSCSAG00000004422	RBM42	100	81.667	Chlorocebus_sabaeus
ENSSARG00000010724	RBM42	100	86.875	ENSCANG00000030272	RBM42	100	86.875	Colobus_angolensis_palliatus
ENSSARG00000010724	RBM42	100	86.875	ENSCGRG00001018540	Rbm42	99	86.875	Cricetulus_griseus_chok1gshd
ENSSARG00000010724	RBM42	100	86.749	ENSDNOG00000037397	RBM42	100	86.749	Dasypus_novemcinctus
ENSSARG00000010724	RBM42	100	86.667	ENSDORG00000013001	Rbm42	99	86.667	Dipodomys_ordii
ENSSARG00000010724	RBM42	65	95.349	ENSETEG00000007878	RBM42	59	76.667	Echinops_telfairi
ENSSARG00000010724	RBM42	100	82.292	ENSEASG00005001074	RBM42	100	82.292	Equus_asinus_asinus
ENSSARG00000010724	RBM42	100	82.292	ENSECAG00000018215	RBM42	100	82.292	Equus_caballus
ENSSARG00000010724	RBM42	100	87.500	ENSFCAG00000006376	RBM42	100	87.500	Felis_catus
ENSSARG00000010724	RBM42	100	86.307	ENSFDAG00000007440	RBM42	99	86.307	Fukomys_damarensis
ENSSARG00000010724	RBM42	100	87.708	ENSGGOG00000009972	RBM42	100	87.708	Gorilla_gorilla
ENSSARG00000010724	RBM42	100	86.042	ENSHGLG00000008418	RBM42	99	86.042	Heterocephalus_glaber_female
ENSSARG00000010724	RBM42	100	86.042	ENSHGLG00100018667	RBM42	99	86.042	Heterocephalus_glaber_male
ENSSARG00000010724	RBM42	100	86.250	ENSSTOG00000013050	RBM42	100	86.250	Ictidomys_tridecemlineatus
ENSSARG00000010724	RBM42	100	86.250	ENSJJAG00000010421	Rbm42	99	86.250	Jaculus_jaculus
ENSSARG00000010724	RBM42	98	84.501	ENSLAFG00000014993	RBM42	94	80.702	Loxodonta_africana
ENSSARG00000010724	RBM42	100	87.500	ENSMFAG00000002758	RBM42	100	87.500	Macaca_fascicularis
ENSSARG00000010724	RBM42	100	87.500	ENSMMUG00000018954	RBM42	100	87.500	Macaca_mulatta
ENSSARG00000010724	RBM42	100	87.500	ENSMNEG00000030009	RBM42	100	87.500	Macaca_nemestrina
ENSSARG00000010724	RBM42	100	87.500	ENSMLEG00000036119	RBM42	100	87.500	Mandrillus_leucophaeus
ENSSARG00000010724	RBM42	100	87.708	ENSMICG00000009880	RBM42	100	87.708	Microcebus_murinus
ENSSARG00000010724	RBM42	100	86.458	ENSMOCG00000000405	Rbm42	99	86.458	Microtus_ochrogaster
ENSSARG00000010724	RBM42	100	87.292	MGP_CAROLIEiJ_G0029536	Rbm42	99	87.292	Mus_caroli
ENSSARG00000010724	RBM42	100	87.292	ENSMUSG00000036733	Rbm42	99	87.292	Mus_musculus
ENSSARG00000010724	RBM42	100	87.292	MGP_PahariEiJ_G0012770	Rbm42	99	87.292	Mus_pahari
ENSSARG00000010724	RBM42	100	87.292	MGP_SPRETEiJ_G0030632	Rbm42	99	87.292	Mus_spretus
ENSSARG00000010724	RBM42	100	81.875	ENSMPUG00000006288	RBM42	100	81.875	Mustela_putorius_furo
ENSSARG00000010724	RBM42	100	87.292	ENSMLUG00000011334	RBM42	100	87.292	Myotis_lucifugus
ENSSARG00000010724	RBM42	100	86.458	ENSNGAG00000019698	Rbm42	99	86.458	Nannospalax_galili
ENSSARG00000010724	RBM42	70	98.204	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSSARG00000010724	RBM42	80	83.590	ENSMEUG00000016300	RBM42	95	75.484	Notamacropus_eugenii
ENSSARG00000010724	RBM42	89	95.349	ENSOPRG00000001229	RBM42	95	81.579	Ochotona_princeps
ENSSARG00000010724	RBM42	100	87.292	ENSODEG00000013705	RBM42	99	87.292	Octodon_degus
ENSSARG00000010724	RBM42	100	81.250	ENSOCUG00000003337	RBM42	100	81.250	Oryctolagus_cuniculus
ENSSARG00000010724	RBM42	100	86.667	ENSOGAG00000004144	RBM42	100	86.667	Otolemur_garnettii
ENSSARG00000010724	RBM42	98	78.723	ENSOARG00000004926	RBM42	93	81.099	Ovis_aries
ENSSARG00000010724	RBM42	100	87.500	ENSPPAG00000037315	RBM42	100	87.500	Pan_paniscus
ENSSARG00000010724	RBM42	100	87.500	ENSPPRG00000016784	RBM42	100	87.500	Panthera_pardus
ENSSARG00000010724	RBM42	100	87.083	ENSPTIG00000019270	RBM42	100	87.083	Panthera_tigris_altaica
ENSSARG00000010724	RBM42	100	87.708	ENSPTRG00000010852	RBM42	100	87.708	Pan_troglodytes
ENSSARG00000010724	RBM42	100	87.500	ENSPANG00000017032	RBM42	100	87.500	Papio_anubis
ENSSARG00000010724	RBM42	100	87.500	ENSPEMG00000012065	Rbm42	99	87.500	Peromyscus_maniculatus_bairdii
ENSSARG00000010724	RBM42	100	86.804	ENSPPYG00000009871	RBM42	100	86.804	Pongo_abelii
ENSSARG00000010724	RBM42	78	97.674	ENSPCAG00000013053	RBM42	69	93.072	Procavia_capensis
ENSSARG00000010724	RBM42	69	98.498	ENSPCOG00000020672	RBM42	81	98.498	Propithecus_coquereli
ENSSARG00000010724	RBM42	100	87.708	ENSPCOG00000026433	-	100	87.708	Propithecus_coquereli
ENSSARG00000010724	RBM42	100	87.500	ENSPVAG00000012815	RBM42	100	87.500	Pteropus_vampyrus
ENSSARG00000010724	RBM42	100	87.500	ENSRNOG00000024278	Rbm42	99	87.500	Rattus_norvegicus
ENSSARG00000010724	RBM42	100	87.500	ENSRBIG00000007566	RBM42	100	87.500	Rhinopithecus_bieti
ENSSARG00000010724	RBM42	100	87.500	ENSRROG00000042313	RBM42	100	87.500	Rhinopithecus_roxellana
ENSSARG00000010724	RBM42	80	97.927	ENSSBOG00000030666	RBM42	95	97.927	Saimiri_boliviensis_boliviensis
ENSSARG00000010724	RBM42	100	86.875	ENSSSCG00000002905	RBM42	100	86.875	Sus_scrofa
ENSSARG00000010724	RBM42	100	87.292	ENSUAMG00000020711	RBM42	100	87.292	Ursus_americanus
ENSSARG00000010724	RBM42	100	87.292	ENSUMAG00000020223	RBM42	100	87.292	Ursus_maritimus
ENSSARG00000010724	RBM42	100	86.042	ENSVVUG00000015117	RBM42	100	86.042	Vulpes_vulpes