EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000010728 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 67323 bases
Position: chrGeneScaffold_7077:41428-108750
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000009769	ResIII	PF04851.15	1.6e-22	1	2
ENSSARP00000009769	ResIII	PF04851.15	1.6e-22	2	2
ENSSARP00000009769	DEAD	PF00270.29	2.5e-46	1	2
ENSSARP00000009769	DEAD	PF00270.29	2.5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000010814	SNRNP200-201	6168	-	ENSSARP00000009769	2056 (aa)	-	UPI00015819AB

Gene Model

Click here to download ENSSARG00000010728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000010728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000010728	SNRNP200	70	46.226	ENSSARG00000001858	ASCC3	60	46.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000010728	SNRNP200	96	99.196	ENSG00000144028	SNRNP200	96	99.438	Homo_sapiens
ENSSARG00000010728	SNRNP200	96	88.710	ENSAPOG00000010223	snrnp200	95	88.740	Acanthochromis_polyacanthus
ENSSARG00000010728	SNRNP200	96	99.196	ENSAMEG00000008996	SNRNP200	95	99.196	Ailuropoda_melanoleuca
ENSSARG00000010728	SNRNP200	92	87.252	ENSACIG00000001764	snrnp200	94	87.311	Amphilophus_citrinellus
ENSSARG00000010728	SNRNP200	96	88.710	ENSAOCG00000024593	snrnp200	95	88.740	Amphiprion_ocellaris
ENSSARG00000010728	SNRNP200	91	87.252	ENSAPEG00000012554	snrnp200	95	87.252	Amphiprion_percula
ENSSARG00000010728	SNRNP200	96	88.710	ENSATEG00000022522	snrnp200	95	88.740	Anabas_testudineus
ENSSARG00000010728	SNRNP200	95	98.603	ENSAPLG00000004313	SNRNP200	95	98.603	Anas_platyrhynchos
ENSSARG00000010728	SNRNP200	94	98.660	ENSACAG00000000434	SNRNP200	95	98.660	Anolis_carolinensis
ENSSARG00000010728	SNRNP200	96	94.825	ENSANAG00000036625	SNRNP200	95	94.825	Aotus_nancymaae
ENSSARG00000010728	SNRNP200	96	87.903	ENSACLG00000011188	snrnp200	95	87.936	Astatotilapia_calliptera
ENSSARG00000010728	SNRNP200	96	89.247	ENSAMXG00000005684	snrnp200	95	89.276	Astyanax_mexicanus
ENSSARG00000010728	SNRNP200	96	99.196	ENSBTAG00000000848	SNRNP200	95	99.196	Bos_taurus
ENSSARG00000010728	SNRNP200	96	99.196	ENSCJAG00000007514	SNRNP200	95	99.196	Callithrix_jacchus
ENSSARG00000010728	SNRNP200	96	99.196	ENSCAFG00020019979	SNRNP200	95	99.196	Canis_lupus_dingo
ENSSARG00000010728	SNRNP200	96	99.196	ENSCHIG00000020611	SNRNP200	95	99.196	Capra_hircus
ENSSARG00000010728	SNRNP200	96	99.196	ENSTSYG00000010467	SNRNP200	95	99.196	Carlito_syrichta
ENSSARG00000010728	SNRNP200	95	98.607	ENSCAPG00000017234	SNRNP200	95	98.607	Cavia_aperea
ENSSARG00000010728	SNRNP200	96	98.928	ENSCPOG00000006776	SNRNP200	95	98.928	Cavia_porcellus
ENSSARG00000010728	SNRNP200	96	99.196	ENSCCAG00000033962	SNRNP200	95	99.196	Cebus_capucinus
ENSSARG00000010728	SNRNP200	96	99.196	ENSCATG00000015790	SNRNP200	95	99.196	Cercocebus_atys
ENSSARG00000010728	SNRNP200	96	98.928	ENSCLAG00000004116	SNRNP200	95	98.928	Chinchilla_lanigera
ENSSARG00000010728	SNRNP200	96	99.196	ENSCSAG00000017369	SNRNP200	95	99.196	Chlorocebus_sabaeus
ENSSARG00000010728	SNRNP200	69	99.213	ENSCHOG00000012981	-	57	99.213	Choloepus_hoffmanni
ENSSARG00000010728	SNRNP200	96	98.123	ENSCPBG00000022571	SNRNP200	95	98.123	Chrysemys_picta_bellii
ENSSARG00000010728	SNRNP200	96	75.860	ENSCING00000005082	-	95	75.860	Ciona_intestinalis
ENSSARG00000010728	SNRNP200	90	98.780	ENSCANG00000033932	SNRNP200	95	98.780	Colobus_angolensis_palliatus
ENSSARG00000010728	SNRNP200	96	98.928	ENSCGRG00001022610	Snrnp200	95	98.928	Cricetulus_griseus_chok1gshd
ENSSARG00000010728	SNRNP200	96	98.928	ENSCGRG00000016472	Snrnp200	95	98.928	Cricetulus_griseus_crigri
ENSSARG00000010728	SNRNP200	96	87.634	ENSCSEG00000016399	snrnp200	95	87.668	Cynoglossus_semilaevis
ENSSARG00000010728	SNRNP200	93	90.189	ENSCVAG00000017631	snrnp200	95	90.189	Cyprinodon_variegatus
ENSSARG00000010728	SNRNP200	96	87.634	ENSDARG00000077536	snrnp200	95	87.668	Danio_rerio
ENSSARG00000010728	SNRNP200	96	99.196	ENSDNOG00000011227	SNRNP200	95	99.196	Dasypus_novemcinctus
ENSSARG00000010728	SNRNP200	96	95.006	ENSDORG00000005861	Snrnp200	95	95.006	Dipodomys_ordii
ENSSARG00000010728	SNRNP200	96	74.314	FBgn0263599	l(3)72Ab	95	74.314	Drosophila_melanogaster
ENSSARG00000010728	SNRNP200	87	99.858	ENSETEG00000000162	SNRNP200	67	99.858	Echinops_telfairi
ENSSARG00000010728	SNRNP200	72	82.171	ENSEBUG00000016524	snrnp200	86	82.171	Eptatretus_burgeri
ENSSARG00000010728	SNRNP200	96	96.515	ENSEASG00005001884	SNRNP200	95	96.515	Equus_asinus_asinus
ENSSARG00000010728	SNRNP200	96	100.000	ENSECAG00000019675	SNRNP200	96	100.000	Equus_caballus
ENSSARG00000010728	SNRNP200	87	100.000	ENSEEUG00000012178	SNRNP200	89	100.000	Erinaceus_europaeus
ENSSARG00000010728	SNRNP200	96	87.985	ENSELUG00000018948	snrnp200	95	87.985	Esox_lucius
ENSSARG00000010728	SNRNP200	96	99.196	ENSFCAG00000010699	SNRNP200	95	99.196	Felis_catus
ENSSARG00000010728	SNRNP200	89	92.857	ENSFALG00000001368	-	90	92.857	Ficedula_albicollis
ENSSARG00000010728	SNRNP200	96	99.196	ENSFDAG00000004683	SNRNP200	95	99.196	Fukomys_damarensis
ENSSARG00000010728	SNRNP200	96	88.172	ENSFHEG00000003786	snrnp200	95	88.204	Fundulus_heteroclitus
ENSSARG00000010728	SNRNP200	96	88.472	ENSGMOG00000004881	snrnp200	95	88.235	Gadus_morhua
ENSSARG00000010728	SNRNP200	96	88.441	ENSGAFG00000010807	snrnp200	95	88.472	Gambusia_affinis
ENSSARG00000010728	SNRNP200	96	87.430	ENSGACG00000011474	snrnp200	95	87.430	Gasterosteus_aculeatus
ENSSARG00000010728	SNRNP200	91	96.703	ENSGAGG00000016069	SNRNP200	94	96.703	Gopherus_agassizii
ENSSARG00000010728	SNRNP200	96	99.196	ENSGGOG00000005174	SNRNP200	96	99.196	Gorilla_gorilla
ENSSARG00000010728	SNRNP200	92	86.293	ENSHBUG00000011322	snrnp200	95	86.335	Haplochromis_burtoni
ENSSARG00000010728	SNRNP200	96	99.196	ENSHGLG00000006654	SNRNP200	95	99.196	Heterocephalus_glaber_female
ENSSARG00000010728	SNRNP200	96	99.196	ENSHGLG00100018594	SNRNP200	95	99.196	Heterocephalus_glaber_male
ENSSARG00000010728	SNRNP200	96	99.196	ENSSTOG00000016351	SNRNP200	95	99.196	Ictidomys_tridecemlineatus
ENSSARG00000010728	SNRNP200	96	98.928	ENSJJAG00000023659	Snrnp200	95	98.928	Jaculus_jaculus
ENSSARG00000010728	SNRNP200	96	88.441	ENSKMAG00000003665	snrnp200	95	88.472	Kryptolebias_marmoratus
ENSSARG00000010728	SNRNP200	96	88.710	ENSLBEG00000021585	snrnp200	95	88.740	Labrus_bergylta
ENSSARG00000010728	SNRNP200	78	90.869	ENSLACG00000000226	SNRNP200	95	90.869	Latimeria_chalumnae
ENSSARG00000010728	SNRNP200	96	90.323	ENSLOCG00000015198	snrnp200	95	90.349	Lepisosteus_oculatus
ENSSARG00000010728	SNRNP200	96	98.660	ENSLAFG00000015626	SNRNP200	95	98.660	Loxodonta_africana
ENSSARG00000010728	SNRNP200	96	99.196	ENSMFAG00000040174	SNRNP200	95	99.196	Macaca_fascicularis
ENSSARG00000010728	SNRNP200	96	99.196	ENSMMUG00000023261	SNRNP200	95	99.196	Macaca_mulatta
ENSSARG00000010728	SNRNP200	96	98.928	ENSMNEG00000032398	SNRNP200	95	98.928	Macaca_nemestrina
ENSSARG00000010728	SNRNP200	96	99.196	ENSMLEG00000019083	SNRNP200	95	99.196	Mandrillus_leucophaeus
ENSSARG00000010728	SNRNP200	96	87.547	ENSMAMG00000007851	snrnp200	95	87.547	Mastacembelus_armatus
ENSSARG00000010728	SNRNP200	92	86.293	ENSMZEG00005010787	snrnp200	95	86.335	Maylandia_zebra
ENSSARG00000010728	SNRNP200	90	98.026	ENSMGAG00000001831	SNRNP200	95	98.026	Meleagris_gallopavo
ENSSARG00000010728	SNRNP200	96	98.928	ENSMAUG00000011825	Snrnp200	95	98.928	Mesocricetus_auratus
ENSSARG00000010728	SNRNP200	96	98.660	ENSMICG00000004710	SNRNP200	95	98.660	Microcebus_murinus
ENSSARG00000010728	SNRNP200	96	95.184	ENSMOCG00000011814	Snrnp200	95	95.184	Microtus_ochrogaster
ENSSARG00000010728	SNRNP200	96	88.710	ENSMMOG00000014167	snrnp200	95	88.740	Mola_mola
ENSSARG00000010728	SNRNP200	96	98.928	ENSMODG00000008475	SNRNP200	95	98.928	Monodelphis_domestica
ENSSARG00000010728	SNRNP200	96	88.978	ENSMALG00000001973	snrnp200	95	89.008	Monopterus_albus
ENSSARG00000010728	SNRNP200	96	98.123	MGP_CAROLIEiJ_G0024250	Snrnp200	95	98.123	Mus_caroli
ENSSARG00000010728	SNRNP200	96	98.123	ENSMUSG00000003660	Snrnp200	95	98.123	Mus_musculus
ENSSARG00000010728	SNRNP200	96	98.391	MGP_PahariEiJ_G0025695	Snrnp200	95	98.391	Mus_pahari
ENSSARG00000010728	SNRNP200	96	98.123	MGP_SPRETEiJ_G0025170	Snrnp200	94	99.296	Mus_spretus
ENSSARG00000010728	SNRNP200	96	99.196	ENSMPUG00000008949	SNRNP200	95	99.196	Mustela_putorius_furo
ENSSARG00000010728	SNRNP200	96	98.667	ENSMLUG00000010493	SNRNP200	95	98.667	Myotis_lucifugus
ENSSARG00000010728	SNRNP200	96	93.280	ENSMLUG00000027511	-	95	93.298	Myotis_lucifugus
ENSSARG00000010728	SNRNP200	96	99.196	ENSNGAG00000021993	Snrnp200	95	99.196	Nannospalax_galili
ENSSARG00000010728	SNRNP200	85	87.114	ENSNBRG00000017960	snrnp200	93	87.174	Neolamprologus_brichardi
ENSSARG00000010728	SNRNP200	96	97.312	ENSNLEG00000000025	SNRNP200	95	98.123	Nomascus_leucogenys
ENSSARG00000010728	SNRNP200	90	98.611	ENSMEUG00000010532	SNRNP200	71	100.000	Notamacropus_eugenii
ENSSARG00000010728	SNRNP200	96	93.496	ENSOPRG00000015464	SNRNP200	95	93.496	Ochotona_princeps
ENSSARG00000010728	SNRNP200	96	98.928	ENSODEG00000008366	SNRNP200	95	98.928	Octodon_degus
ENSSARG00000010728	SNRNP200	96	87.903	ENSONIG00000010714	snrnp200	95	87.936	Oreochromis_niloticus
ENSSARG00000010728	SNRNP200	96	98.660	ENSOCUG00000009864	SNRNP200	95	98.660	Oryctolagus_cuniculus
ENSSARG00000010728	SNRNP200	96	87.668	ENSORLG00000012286	snrnp200	95	87.668	Oryzias_latipes
ENSSARG00000010728	SNRNP200	96	87.668	ENSORLG00020004648	snrnp200	95	87.668	Oryzias_latipes_hni
ENSSARG00000010728	SNRNP200	96	87.484	ENSORLG00015019114	snrnp200	95	87.484	Oryzias_latipes_hsok
ENSSARG00000010728	SNRNP200	96	87.668	ENSOMEG00000011834	snrnp200	95	87.668	Oryzias_melastigma
ENSSARG00000010728	SNRNP200	96	99.196	ENSOGAG00000006879	SNRNP200	95	99.196	Otolemur_garnettii
ENSSARG00000010728	SNRNP200	96	99.196	ENSOARG00000013949	SNRNP200	95	99.196	Ovis_aries
ENSSARG00000010728	SNRNP200	96	99.196	ENSPPAG00000041559	SNRNP200	95	99.196	Pan_paniscus
ENSSARG00000010728	SNRNP200	96	99.196	ENSPPRG00000004435	SNRNP200	95	99.196	Panthera_pardus
ENSSARG00000010728	SNRNP200	96	99.196	ENSPTIG00000006380	SNRNP200	95	99.196	Panthera_tigris_altaica
ENSSARG00000010728	SNRNP200	96	99.196	ENSPTRG00000012230	SNRNP200	95	99.196	Pan_troglodytes
ENSSARG00000010728	SNRNP200	96	99.196	ENSPANG00000006017	SNRNP200	95	99.196	Papio_anubis
ENSSARG00000010728	SNRNP200	96	88.978	ENSPKIG00000014762	snrnp200	95	89.008	Paramormyrops_kingsleyae
ENSSARG00000010728	SNRNP200	96	98.123	ENSPSIG00000008580	SNRNP200	95	98.128	Pelodiscus_sinensis
ENSSARG00000010728	SNRNP200	96	98.928	ENSPCIG00000023050	SNRNP200	95	98.928	Phascolarctos_cinereus
ENSSARG00000010728	SNRNP200	96	87.903	ENSPFOG00000015110	snrnp200	95	87.936	Poecilia_formosa
ENSSARG00000010728	SNRNP200	92	86.916	ENSPLAG00000006711	snrnp200	94	86.957	Poecilia_latipinna
ENSSARG00000010728	SNRNP200	92	86.916	ENSPMEG00000021166	snrnp200	94	86.957	Poecilia_mexicana
ENSSARG00000010728	SNRNP200	96	87.903	ENSPREG00000008875	snrnp200	95	87.936	Poecilia_reticulata
ENSSARG00000010728	SNRNP200	96	99.196	ENSPPYG00000012068	SNRNP200	95	99.196	Pongo_abelii
ENSSARG00000010728	SNRNP200	91	98.718	ENSPCAG00000008536	SNRNP200	82	98.718	Procavia_capensis
ENSSARG00000010728	SNRNP200	96	98.928	ENSPCOG00000024608	SNRNP200	95	98.928	Propithecus_coquereli
ENSSARG00000010728	SNRNP200	92	99.320	ENSPVAG00000005860	SNRNP200	88	99.320	Pteropus_vampyrus
ENSSARG00000010728	SNRNP200	96	87.903	ENSPNYG00000017476	snrnp200	95	87.936	Pundamilia_nyererei
ENSSARG00000010728	SNRNP200	96	87.366	ENSPNAG00000010998	snrnp200	95	87.399	Pygocentrus_nattereri
ENSSARG00000010728	SNRNP200	96	98.928	ENSRNOG00000012157	Snrnp200	95	98.928	Rattus_norvegicus
ENSSARG00000010728	SNRNP200	96	99.196	ENSRBIG00000044690	-	95	99.196	Rhinopithecus_bieti
ENSSARG00000010728	SNRNP200	96	99.196	ENSRROG00000037952	-	95	99.196	Rhinopithecus_roxellana
ENSSARG00000010728	SNRNP200	96	99.196	ENSSBOG00000035471	SNRNP200	95	99.196	Saimiri_boliviensis_boliviensis
ENSSARG00000010728	SNRNP200	92	98.355	ENSSHAG00000000758	SNRNP200	95	98.355	Sarcophilus_harrisii
ENSSARG00000010728	SNRNP200	96	90.054	ENSSFOG00015018826	snrnp200	95	90.080	Scleropages_formosus
ENSSARG00000010728	SNRNP200	96	87.903	ENSSMAG00000005463	snrnp200	95	87.936	Scophthalmus_maximus
ENSSARG00000010728	SNRNP200	96	88.710	ENSSDUG00000021410	snrnp200	95	88.740	Seriola_dumerili
ENSSARG00000010728	SNRNP200	96	88.710	ENSSLDG00000010884	snrnp200	95	88.740	Seriola_lalandi_dorsalis
ENSSARG00000010728	SNRNP200	96	97.587	ENSSPUG00000003726	-	95	97.587	Sphenodon_punctatus
ENSSARG00000010728	SNRNP200	96	88.710	ENSSPAG00000001842	snrnp200	95	88.740	Stegastes_partitus
ENSSARG00000010728	SNRNP200	96	99.196	ENSSSCG00000008127	SNRNP200	95	99.196	Sus_scrofa
ENSSARG00000010728	SNRNP200	93	89.385	ENSTGUG00000014475	-	95	89.415	Taeniopygia_guttata
ENSSARG00000010728	SNRNP200	96	87.422	ENSTRUG00000001307	snrnp200	95	87.422	Takifugu_rubripes
ENSSARG00000010728	SNRNP200	92	89.641	ENSTNIG00000004320	snrnp200	95	89.641	Tetraodon_nigroviridis
ENSSARG00000010728	SNRNP200	73	98.734	ENSTBEG00000003329	-	60	98.734	Tupaia_belangeri
ENSSARG00000010728	SNRNP200	96	97.855	ENSTTRG00000004983	SNRNP200	95	97.855	Tursiops_truncatus
ENSSARG00000010728	SNRNP200	70	97.208	ENSUAMG00000008395	-	87	97.208	Ursus_americanus
ENSSARG00000010728	SNRNP200	96	99.196	ENSUMAG00000012385	SNRNP200	95	99.196	Ursus_maritimus
ENSSARG00000010728	SNRNP200	82	100.000	ENSVPAG00000006434	SNRNP200	62	100.000	Vicugna_pacos
ENSSARG00000010728	SNRNP200	96	99.196	ENSVVUG00000026247	SNRNP200	95	99.196	Vulpes_vulpes
ENSSARG00000010728	SNRNP200	96	92.761	ENSXETG00000001243	snrnp200	95	92.761	Xenopus_tropicalis
ENSSARG00000010728	SNRNP200	92	87.320	ENSXMAG00000002058	snrnp200	94	87.320	Xiphophorus_maculatus